Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0929

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0928 and B158DRAFT_0929 are separated by 127 nucleotidesB158DRAFT_0929 and B158DRAFT_0930 overlap by 4 nucleotidesB158DRAFT_0930 and B158DRAFT_0931 are separated by 229 nucleotides B158DRAFT_0928: B158DRAFT_0928 - hypothetical protein, at 956,034 to 957,629 _0928 B158DRAFT_0929: B158DRAFT_0929 - Uncharacterized protein conserved in bacteria, at 957,757 to 958,446 _0929 B158DRAFT_0930: B158DRAFT_0930 - RNA polymerase sigma factor, sigma-70 family, at 958,443 to 958,991 _0930 B158DRAFT_0931: B158DRAFT_0931 - amidase, hydantoinase/carbamoylase family, at 959,221 to 960,471 _0931 Position (kb) 957 958 959Strain fitness (log2 ratio) -2 -1 0 1at 956.858 kb on - strand, within B158DRAFT_0928at 956.941 kb on - strand, within B158DRAFT_0928at 956.941 kb on - strand, within B158DRAFT_0928at 956.976 kb on + strand, within B158DRAFT_0928at 956.984 kb on - strand, within B158DRAFT_0928at 957.025 kb on + strand, within B158DRAFT_0928at 957.049 kb on + strand, within B158DRAFT_0928at 957.092 kb on + strand, within B158DRAFT_0928at 957.100 kb on - strand, within B158DRAFT_0928at 957.108 kb on - strand, within B158DRAFT_0928at 957.114 kb on + strand, within B158DRAFT_0928at 957.115 kb on - strand, within B158DRAFT_0928at 957.122 kb on - strand, within B158DRAFT_0928at 957.164 kb on + strand, within B158DRAFT_0928at 957.183 kb on + strand, within B158DRAFT_0928at 957.183 kb on + strand, within B158DRAFT_0928at 957.191 kb on - strand, within B158DRAFT_0928at 957.191 kb on - strand, within B158DRAFT_0928at 957.191 kb on - strand, within B158DRAFT_0928at 957.387 kb on + strand, within B158DRAFT_0928at 957.411 kb on + strand, within B158DRAFT_0928at 957.431 kb on + strand, within B158DRAFT_0928at 957.539 kb on - strandat 957.548 kb on + strandat 957.548 kb on + strandat 957.556 kb on - strandat 957.578 kb on - strandat 957.578 kb on - strandat 957.580 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.585 kb on + strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.593 kb on - strandat 957.777 kb on + strandat 957.852 kb on + strand, within B158DRAFT_0929at 957.852 kb on + strand, within B158DRAFT_0929at 957.860 kb on - strand, within B158DRAFT_0929at 957.863 kb on + strand, within B158DRAFT_0929at 957.973 kb on + strand, within B158DRAFT_0929at 957.973 kb on + strand, within B158DRAFT_0929at 957.973 kb on + strand, within B158DRAFT_0929at 957.973 kb on + strand, within B158DRAFT_0929at 957.973 kb on + strand, within B158DRAFT_0929at 957.981 kb on - strand, within B158DRAFT_0929at 957.981 kb on - strand, within B158DRAFT_0929at 957.981 kb on - strand, within B158DRAFT_0929at 957.981 kb on - strand, within B158DRAFT_0929at 957.981 kb on - strand, within B158DRAFT_0929at 958.009 kb on - strand, within B158DRAFT_0929at 958.016 kb on - strand, within B158DRAFT_0929at 958.033 kb on + strand, within B158DRAFT_0929at 958.041 kb on - strand, within B158DRAFT_0929at 958.041 kb on - strand, within B158DRAFT_0929at 958.041 kb on - strand, within B158DRAFT_0929at 958.051 kb on - strand, within B158DRAFT_0929at 958.060 kb on - strand, within B158DRAFT_0929at 958.084 kb on + strand, within B158DRAFT_0929at 958.098 kb on + strand, within B158DRAFT_0929at 958.107 kb on + strand, within B158DRAFT_0929at 958.115 kb on - strand, within B158DRAFT_0929at 958.149 kb on + strand, within B158DRAFT_0929at 958.171 kb on + strand, within B158DRAFT_0929at 958.227 kb on + strand, within B158DRAFT_0929at 958.227 kb on + strand, within B158DRAFT_0929at 958.233 kb on + strand, within B158DRAFT_0929at 958.235 kb on - strand, within B158DRAFT_0929at 958.235 kb on - strand, within B158DRAFT_0929at 958.322 kb on - strand, within B158DRAFT_0929at 958.326 kb on + strand, within B158DRAFT_0929at 958.335 kb on + strand, within B158DRAFT_0929at 958.364 kb on - strand, within B158DRAFT_0929at 958.390 kb on + strandat 958.390 kb on + strandat 958.398 kb on + strandat 958.469 kb on + strandat 958.477 kb on - strandat 958.477 kb on - strandat 958.513 kb on + strand, within B158DRAFT_0930at 958.513 kb on + strand, within B158DRAFT_0930at 958.521 kb on - strand, within B158DRAFT_0930at 958.521 kb on - strand, within B158DRAFT_0930at 958.521 kb on - strand, within B158DRAFT_0930at 958.521 kb on - strand, within B158DRAFT_0930at 958.549 kb on - strand, within B158DRAFT_0930at 958.549 kb on - strand, within B158DRAFT_0930at 958.588 kb on + strand, within B158DRAFT_0930at 958.588 kb on + strand, within B158DRAFT_0930at 958.596 kb on - strand, within B158DRAFT_0930at 958.647 kb on + strand, within B158DRAFT_0930at 958.696 kb on + strand, within B158DRAFT_0930at 958.704 kb on - strand, within B158DRAFT_0930at 958.758 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.790 kb on + strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.798 kb on - strand, within B158DRAFT_0930at 958.815 kb on - strand, within B158DRAFT_0930at 958.975 kb on - strandat 958.977 kb on + strandat 958.990 kb on - strandat 958.991 kb on + strandat 958.991 kb on + strandat 958.991 kb on + strandat 958.999 kb on - strandat 958.999 kb on - strandat 959.051 kb on + strandat 959.079 kb on - strandat 959.084 kb on - strandat 959.119 kb on + strandat 959.123 kb on - strandat 959.133 kb on + strandat 959.152 kb on + strandat 959.162 kb on + strandat 959.162 kb on + strandat 959.170 kb on - strandat 959.237 kb on + strandat 959.240 kb on - strandat 959.240 kb on - strandat 959.277 kb on + strandat 959.285 kb on - strandat 959.285 kb on - strandat 959.285 kb on - strandat 959.314 kb on + strandat 959.314 kb on + strandat 959.314 kb on + strandat 959.314 kb on + strandat 959.316 kb on + strandat 959.322 kb on - strandat 959.322 kb on - strandat 959.322 kb on - strandat 959.322 kb on - strandat 959.324 kb on - strandat 959.394 kb on - strand, within B158DRAFT_0931at 959.394 kb on - strand, within B158DRAFT_0931at 959.395 kb on + strand, within B158DRAFT_0931at 959.395 kb on + strand, within B158DRAFT_0931

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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956,858 - B158DRAFT_0928 0.52 +0.1
956,941 - B158DRAFT_0928 0.57 +0.2
956,941 - B158DRAFT_0928 0.57 -1.3
956,976 + B158DRAFT_0928 0.59 +0.3
956,984 - B158DRAFT_0928 0.60 +0.1
957,025 + B158DRAFT_0928 0.62 -0.0
957,049 + B158DRAFT_0928 0.64 -0.1
957,092 + B158DRAFT_0928 0.66 +0.4
957,100 - B158DRAFT_0928 0.67 -0.2
957,108 - B158DRAFT_0928 0.67 -0.3
957,114 + B158DRAFT_0928 0.68 -0.2
957,115 - B158DRAFT_0928 0.68 -0.0
957,122 - B158DRAFT_0928 0.68 -0.2
957,164 + B158DRAFT_0928 0.71 +0.2
957,183 + B158DRAFT_0928 0.72 -0.2
957,183 + B158DRAFT_0928 0.72 +0.5
957,191 - B158DRAFT_0928 0.72 +0.1
957,191 - B158DRAFT_0928 0.72 +0.0
957,191 - B158DRAFT_0928 0.72 -0.2
957,387 + B158DRAFT_0928 0.85 +0.1
957,411 + B158DRAFT_0928 0.86 -0.2
957,431 + B158DRAFT_0928 0.88 -0.4
957,539 - +0.5
957,548 + -0.1
957,548 + -1.6
957,556 - -0.2
957,578 - -0.7
957,578 - -0.1
957,580 + -1.0
957,585 + -0.2
957,585 + -1.2
957,585 + -0.2
957,585 + -0.2
957,585 + +0.0
957,585 + -0.2
957,585 + +0.1
957,593 - -0.3
957,593 - -0.1
957,593 - -0.6
957,593 - -0.1
957,593 - -0.1
957,593 - +0.1
957,593 - -0.1
957,593 - +0.0
957,593 - -0.4
957,777 + +0.0
957,852 + B158DRAFT_0929 0.14 -0.6
957,852 + B158DRAFT_0929 0.14 -0.1
957,860 - B158DRAFT_0929 0.15 +0.4
957,863 + B158DRAFT_0929 0.15 -0.1
957,973 + B158DRAFT_0929 0.31 +0.1
957,973 + B158DRAFT_0929 0.31 +0.0
957,973 + B158DRAFT_0929 0.31 +0.2
957,973 + B158DRAFT_0929 0.31 +0.2
957,973 + B158DRAFT_0929 0.31 -0.4
957,981 - B158DRAFT_0929 0.32 -0.0
957,981 - B158DRAFT_0929 0.32 -0.4
957,981 - B158DRAFT_0929 0.32 -1.4
957,981 - B158DRAFT_0929 0.32 -0.4
957,981 - B158DRAFT_0929 0.32 -0.1
958,009 - B158DRAFT_0929 0.37 -0.9
958,016 - B158DRAFT_0929 0.38 +0.2
958,033 + B158DRAFT_0929 0.40 -0.4
958,041 - B158DRAFT_0929 0.41 -0.3
958,041 - B158DRAFT_0929 0.41 +0.2
958,041 - B158DRAFT_0929 0.41 -0.5
958,051 - B158DRAFT_0929 0.43 -0.4
958,060 - B158DRAFT_0929 0.44 -0.3
958,084 + B158DRAFT_0929 0.47 -0.5
958,098 + B158DRAFT_0929 0.49 +0.0
958,107 + B158DRAFT_0929 0.51 -1.2
958,115 - B158DRAFT_0929 0.52 +0.2
958,149 + B158DRAFT_0929 0.57 -0.4
958,171 + B158DRAFT_0929 0.60 -0.1
958,227 + B158DRAFT_0929 0.68 +0.1
958,227 + B158DRAFT_0929 0.68 +0.1
958,233 + B158DRAFT_0929 0.69 -0.1
958,235 - B158DRAFT_0929 0.69 -0.0
958,235 - B158DRAFT_0929 0.69 +0.1
958,322 - B158DRAFT_0929 0.82 -0.6
958,326 + B158DRAFT_0929 0.82 -0.6
958,335 + B158DRAFT_0929 0.84 -0.1
958,364 - B158DRAFT_0929 0.88 +0.1
958,390 + -0.7
958,390 + -0.1
958,398 + -0.0
958,469 + +1.3
958,477 - +0.4
958,477 - -0.9
958,513 + B158DRAFT_0930 0.13 -0.4
958,513 + B158DRAFT_0930 0.13 -0.4
958,521 - B158DRAFT_0930 0.14 -1.1
958,521 - B158DRAFT_0930 0.14 +0.3
958,521 - B158DRAFT_0930 0.14 +0.1
958,521 - B158DRAFT_0930 0.14 +0.5
958,549 - B158DRAFT_0930 0.19 +0.4
958,549 - B158DRAFT_0930 0.19 -0.0
958,588 + B158DRAFT_0930 0.26 +0.0
958,588 + B158DRAFT_0930 0.26 -0.2
958,596 - B158DRAFT_0930 0.28 +0.0
958,647 + B158DRAFT_0930 0.37 -0.1
958,696 + B158DRAFT_0930 0.46 +0.2
958,704 - B158DRAFT_0930 0.48 +1.1
958,758 + B158DRAFT_0930 0.57 +0.0
958,790 + B158DRAFT_0930 0.63 -0.6
958,790 + B158DRAFT_0930 0.63 -1.2
958,790 + B158DRAFT_0930 0.63 -0.2
958,790 + B158DRAFT_0930 0.63 -0.2
958,790 + B158DRAFT_0930 0.63 +0.3
958,790 + B158DRAFT_0930 0.63 -0.0
958,790 + B158DRAFT_0930 0.63 -0.3
958,790 + B158DRAFT_0930 0.63 -0.3
958,790 + B158DRAFT_0930 0.63 +0.0
958,790 + B158DRAFT_0930 0.63 -0.0
958,790 + B158DRAFT_0930 0.63 +0.1
958,790 + B158DRAFT_0930 0.63 -0.1
958,790 + B158DRAFT_0930 0.63 +0.1
958,790 + B158DRAFT_0930 0.63 -0.1
958,790 + B158DRAFT_0930 0.63 -0.5
958,790 + B158DRAFT_0930 0.63 -0.2
958,798 - B158DRAFT_0930 0.65 -0.2
958,798 - B158DRAFT_0930 0.65 +0.3
958,798 - B158DRAFT_0930 0.65 +1.1
958,798 - B158DRAFT_0930 0.65 -1.9
958,798 - B158DRAFT_0930 0.65 +0.9
958,798 - B158DRAFT_0930 0.65 -0.1
958,798 - B158DRAFT_0930 0.65 -0.3
958,798 - B158DRAFT_0930 0.65 -1.5
958,798 - B158DRAFT_0930 0.65 -0.4
958,798 - B158DRAFT_0930 0.65 -0.7
958,798 - B158DRAFT_0930 0.65 +0.4
958,798 - B158DRAFT_0930 0.65 -0.4
958,798 - B158DRAFT_0930 0.65 +0.1
958,798 - B158DRAFT_0930 0.65 -0.7
958,798 - B158DRAFT_0930 0.65 -0.5
958,798 - B158DRAFT_0930 0.65 -1.0
958,798 - B158DRAFT_0930 0.65 -0.5
958,798 - B158DRAFT_0930 0.65 +0.0
958,798 - B158DRAFT_0930 0.65 -0.0
958,798 - B158DRAFT_0930 0.65 +0.4
958,798 - B158DRAFT_0930 0.65 -0.2
958,798 - B158DRAFT_0930 0.65 -0.4
958,798 - B158DRAFT_0930 0.65 +0.4
958,815 - B158DRAFT_0930 0.68 +0.6
958,975 - -0.7
958,977 + +0.4
958,990 - -0.7
958,991 + +0.1
958,991 + -0.0
958,991 + +0.7
958,999 - +0.5
958,999 - +0.8
959,051 + +0.2
959,079 - -0.4
959,084 - +0.3
959,119 + -0.4
959,123 - +0.0
959,133 + -0.5
959,152 + -0.2
959,162 + -0.8
959,162 + -0.2
959,170 - -0.2
959,237 + +0.2
959,240 - -0.5
959,240 - -0.2
959,277 + -0.0
959,285 - -1.0
959,285 - +0.1
959,285 - -0.2
959,314 + +0.2
959,314 + -1.4
959,314 + -0.3
959,314 + -0.3
959,316 + +0.2
959,322 - +0.9
959,322 - -0.3
959,322 - -0.4
959,322 - -0.2
959,324 - -0.3
959,394 - B158DRAFT_0931 0.14 -0.0
959,394 - B158DRAFT_0931 0.14 -0.2
959,395 + B158DRAFT_0931 0.14 -0.5
959,395 + B158DRAFT_0931 0.14 -0.3

Or see this region's nucleotide sequence