Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0925

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0923 and B158DRAFT_0924 are separated by 179 nucleotidesB158DRAFT_0924 and B158DRAFT_0925 are separated by 101 nucleotidesB158DRAFT_0925 and B158DRAFT_0926 overlap by 8 nucleotides B158DRAFT_0923: B158DRAFT_0923 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 950,391 to 952,358 _0923 B158DRAFT_0924: B158DRAFT_0924 - Molecular chaperone (small heat shock protein), at 952,538 to 953,029 _0924 B158DRAFT_0925: B158DRAFT_0925 - Hydrogenase/urease accessory protein, at 953,131 to 954,342 _0925 B158DRAFT_0926: B158DRAFT_0926 - hypothetical protein, at 954,335 to 955,486 _0926 Position (kb) 953 954 955Strain fitness (log2 ratio) -2 -1 0 1at 952.202 kb on + strandat 952.250 kb on - strandat 952.393 kb on - strandat 952.485 kb on + strandat 952.485 kb on + strandat 952.493 kb on - strandat 952.567 kb on - strandat 952.609 kb on - strand, within B158DRAFT_0924at 952.611 kb on + strand, within B158DRAFT_0924at 952.639 kb on + strand, within B158DRAFT_0924at 952.757 kb on + strand, within B158DRAFT_0924at 952.765 kb on - strand, within B158DRAFT_0924at 952.817 kb on - strand, within B158DRAFT_0924at 952.904 kb on - strand, within B158DRAFT_0924at 952.975 kb on - strand, within B158DRAFT_0924at 952.989 kb on - strandat 953.058 kb on + strandat 953.203 kb on - strandat 953.203 kb on - strandat 953.203 kb on - strandat 953.203 kb on - strandat 953.203 kb on - strandat 953.230 kb on + strandat 953.238 kb on - strandat 953.322 kb on + strand, within B158DRAFT_0925at 953.433 kb on + strand, within B158DRAFT_0925at 953.481 kb on - strand, within B158DRAFT_0925at 953.502 kb on + strand, within B158DRAFT_0925at 953.502 kb on + strand, within B158DRAFT_0925at 953.508 kb on + strand, within B158DRAFT_0925at 953.516 kb on - strand, within B158DRAFT_0925at 953.517 kb on - strand, within B158DRAFT_0925at 953.530 kb on - strand, within B158DRAFT_0925at 953.575 kb on + strand, within B158DRAFT_0925at 953.575 kb on + strand, within B158DRAFT_0925at 953.679 kb on - strand, within B158DRAFT_0925at 953.803 kb on - strand, within B158DRAFT_0925at 953.828 kb on - strand, within B158DRAFT_0925at 953.828 kb on - strand, within B158DRAFT_0925at 954.085 kb on + strand, within B158DRAFT_0925at 954.173 kb on - strand, within B158DRAFT_0925at 954.432 kb on - strandat 954.454 kb on - strand, within B158DRAFT_0926at 954.582 kb on + strand, within B158DRAFT_0926at 954.590 kb on - strand, within B158DRAFT_0926at 954.656 kb on + strand, within B158DRAFT_0926at 954.691 kb on - strand, within B158DRAFT_0926at 954.807 kb on - strand, within B158DRAFT_0926at 954.989 kb on + strand, within B158DRAFT_0926at 954.997 kb on - strand, within B158DRAFT_0926at 955.201 kb on - strand, within B158DRAFT_0926at 955.215 kb on - strand, within B158DRAFT_0926at 955.217 kb on + strand, within B158DRAFT_0926at 955.305 kb on - strand, within B158DRAFT_0926

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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952,202 + -0.9
952,250 - -0.3
952,393 - -0.0
952,485 + -0.2
952,485 + -0.4
952,493 - -0.7
952,567 - +0.0
952,609 - B158DRAFT_0924 0.14 -0.1
952,611 + B158DRAFT_0924 0.15 -0.3
952,639 + B158DRAFT_0924 0.21 -0.2
952,757 + B158DRAFT_0924 0.45 -2.0
952,765 - B158DRAFT_0924 0.46 +0.6
952,817 - B158DRAFT_0924 0.57 -0.8
952,904 - B158DRAFT_0924 0.74 +0.1
952,975 - B158DRAFT_0924 0.89 -0.3
952,989 - -0.3
953,058 + -0.2
953,203 - -0.4
953,203 - -0.1
953,203 - -0.5
953,203 - +0.1
953,203 - -0.3
953,230 + +0.1
953,238 - -0.4
953,322 + B158DRAFT_0925 0.16 +0.4
953,433 + B158DRAFT_0925 0.25 -0.3
953,481 - B158DRAFT_0925 0.29 -0.3
953,502 + B158DRAFT_0925 0.31 -0.0
953,502 + B158DRAFT_0925 0.31 +0.5
953,508 + B158DRAFT_0925 0.31 +0.2
953,516 - B158DRAFT_0925 0.32 -0.0
953,517 - B158DRAFT_0925 0.32 -0.1
953,530 - B158DRAFT_0925 0.33 -0.2
953,575 + B158DRAFT_0925 0.37 +0.2
953,575 + B158DRAFT_0925 0.37 -1.0
953,679 - B158DRAFT_0925 0.45 -0.1
953,803 - B158DRAFT_0925 0.55 -0.1
953,828 - B158DRAFT_0925 0.58 -0.0
953,828 - B158DRAFT_0925 0.58 +0.9
954,085 + B158DRAFT_0925 0.79 +0.0
954,173 - B158DRAFT_0925 0.86 -0.3
954,432 - +0.1
954,454 - B158DRAFT_0926 0.10 +0.3
954,582 + B158DRAFT_0926 0.21 -0.0
954,590 - B158DRAFT_0926 0.22 +0.4
954,656 + B158DRAFT_0926 0.28 +0.1
954,691 - B158DRAFT_0926 0.31 -0.4
954,807 - B158DRAFT_0926 0.41 +0.5
954,989 + B158DRAFT_0926 0.57 +0.1
954,997 - B158DRAFT_0926 0.57 -0.6
955,201 - B158DRAFT_0926 0.75 -0.8
955,215 - B158DRAFT_0926 0.76 +0.1
955,217 + B158DRAFT_0926 0.77 -0.0
955,305 - B158DRAFT_0926 0.84 -0.0

Or see this region's nucleotide sequence