Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0896

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0894 and B158DRAFT_0895 are separated by 46 nucleotidesB158DRAFT_0895 and B158DRAFT_0896 are separated by 22 nucleotidesB158DRAFT_0896 and B158DRAFT_0897 are separated by 139 nucleotidesB158DRAFT_0897 and B158DRAFT_0898 are separated by 80 nucleotides B158DRAFT_0894: B158DRAFT_0894 - phosphate uptake regulator, PhoU, at 916,123 to 916,854 _0894 B158DRAFT_0895: B158DRAFT_0895 - phosphate regulon transcriptional regulatory protein PhoB, at 916,901 to 917,593 _0895 B158DRAFT_0896: B158DRAFT_0896 - phosphate regulon sensor kinase PhoR, at 917,616 to 918,905 _0896 B158DRAFT_0897: B158DRAFT_0897 - hypothetical protein, at 919,045 to 919,365 _0897 B158DRAFT_0898: B158DRAFT_0898 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 919,446 to 920,663 _0898 Position (kb) 917 918 919Strain fitness (log2 ratio) -3 -2 -1 0 1at 916.697 kb on + strand, within B158DRAFT_0894at 917.161 kb on - strand, within B158DRAFT_0895at 917.173 kb on - strand, within B158DRAFT_0895at 917.280 kb on - strand, within B158DRAFT_0895at 917.323 kb on + strand, within B158DRAFT_0895at 917.328 kb on + strand, within B158DRAFT_0895at 917.503 kb on - strand, within B158DRAFT_0895at 917.605 kb on - strandat 917.645 kb on + strandat 917.670 kb on - strandat 917.720 kb on - strandat 917.920 kb on - strand, within B158DRAFT_0896at 917.951 kb on - strand, within B158DRAFT_0896at 917.957 kb on - strand, within B158DRAFT_0896at 918.263 kb on + strand, within B158DRAFT_0896at 918.349 kb on - strand, within B158DRAFT_0896at 918.385 kb on - strand, within B158DRAFT_0896at 918.588 kb on + strand, within B158DRAFT_0896at 918.632 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.740 kb on + strand, within B158DRAFT_0896at 918.779 kb on + strandat 918.795 kb on + strandat 918.814 kb on - strandat 918.825 kb on - strandat 918.873 kb on + strandat 918.881 kb on - strandat 918.906 kb on + strandat 918.980 kb on + strandat 918.988 kb on - strandat 919.033 kb on - strandat 919.213 kb on - strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.254 kb on - strand, within B158DRAFT_0897at 919.286 kb on - strand, within B158DRAFT_0897at 919.297 kb on + strand, within B158DRAFT_0897at 919.305 kb on - strand, within B158DRAFT_0897at 919.334 kb on - strandat 919.479 kb on - strandat 919.486 kb on - strandat 919.542 kb on + strandat 919.542 kb on + strandat 919.542 kb on + strandat 919.646 kb on + strand, within B158DRAFT_0898at 919.652 kb on + strand, within B158DRAFT_0898at 919.717 kb on - strand, within B158DRAFT_0898at 919.760 kb on + strand, within B158DRAFT_0898at 919.765 kb on + strand, within B158DRAFT_0898at 919.773 kb on - strand, within B158DRAFT_0898at 919.801 kb on + strand, within B158DRAFT_0898at 919.874 kb on + strand, within B158DRAFT_0898at 919.882 kb on - strand, within B158DRAFT_0898

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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916,697 + B158DRAFT_0894 0.78 +0.1
917,161 - B158DRAFT_0895 0.38 -0.5
917,173 - B158DRAFT_0895 0.39 -2.5
917,280 - B158DRAFT_0895 0.55 -1.8
917,323 + B158DRAFT_0895 0.61 -0.5
917,328 + B158DRAFT_0895 0.62 +0.5
917,503 - B158DRAFT_0895 0.87 -1.9
917,605 - -2.5
917,645 + +0.1
917,670 - -0.5
917,720 - -2.3
917,920 - B158DRAFT_0896 0.24 -1.7
917,951 - B158DRAFT_0896 0.26 -1.9
917,957 - B158DRAFT_0896 0.26 -1.5
918,263 + B158DRAFT_0896 0.50 -3.2
918,349 - B158DRAFT_0896 0.57 -0.8
918,385 - B158DRAFT_0896 0.60 -1.7
918,588 + B158DRAFT_0896 0.75 -1.5
918,632 - B158DRAFT_0896 0.79 -2.4
918,700 - B158DRAFT_0896 0.84 -3.6
918,700 - B158DRAFT_0896 0.84 -1.5
918,700 - B158DRAFT_0896 0.84 -0.5
918,740 + B158DRAFT_0896 0.87 -2.4
918,779 + -2.4
918,795 + -3.4
918,814 - -1.3
918,825 - -2.3
918,873 + -1.5
918,881 - -0.2
918,906 + +0.2
918,980 + -0.1
918,988 - -0.0
919,033 - -0.2
919,213 - B158DRAFT_0897 0.52 -0.5
919,246 + B158DRAFT_0897 0.63 +0.1
919,246 + B158DRAFT_0897 0.63 -1.2
919,246 + B158DRAFT_0897 0.63 -0.1
919,254 - B158DRAFT_0897 0.65 -0.1
919,286 - B158DRAFT_0897 0.75 -1.3
919,297 + B158DRAFT_0897 0.79 -0.2
919,305 - B158DRAFT_0897 0.81 -0.4
919,334 - -0.1
919,479 - -0.9
919,486 - -0.5
919,542 + -0.6
919,542 + -0.9
919,542 + -1.5
919,646 + B158DRAFT_0898 0.16 -0.8
919,652 + B158DRAFT_0898 0.17 -1.4
919,717 - B158DRAFT_0898 0.22 -0.5
919,760 + B158DRAFT_0898 0.26 -0.6
919,765 + B158DRAFT_0898 0.26 -0.9
919,773 - B158DRAFT_0898 0.27 -0.4
919,801 + B158DRAFT_0898 0.29 -0.7
919,874 + B158DRAFT_0898 0.35 -1.4
919,882 - B158DRAFT_0898 0.36 -1.4

Or see this region's nucleotide sequence