Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0775

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0773 and B158DRAFT_0774 are separated by 106 nucleotidesB158DRAFT_0774 and B158DRAFT_0775 are separated by 39 nucleotidesB158DRAFT_0775 and B158DRAFT_0776 are separated by 32 nucleotidesB158DRAFT_0776 and B158DRAFT_0777 are separated by 180 nucleotides B158DRAFT_0773: B158DRAFT_0773 - Predicted esterase of the alpha-beta hydrolase superfamily, at 779,784 to 780,548 _0773 B158DRAFT_0774: B158DRAFT_0774 - Predicted Fe-S-cluster oxidoreductase, at 780,655 to 781,032 _0774 B158DRAFT_0775: B158DRAFT_0775 - Protein of unknown function (DUF3301)., at 781,072 to 781,443 _0775 B158DRAFT_0776: B158DRAFT_0776 - outer membrane transport energization protein ExbD (TC 2.C.1.1.1), at 781,476 to 781,889 _0776 B158DRAFT_0777: B158DRAFT_0777 - outer membrane transport energization protein ExbD (TC 2.C.1.1.1), at 782,070 to 782,486 _0777 Position (kb) 781 782Strain fitness (log2 ratio) -1 0 1 2at 780.123 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.128 kb on + strand, within B158DRAFT_0773at 780.131 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.136 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.171 kb on - strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.188 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.233 kb on + strand, within B158DRAFT_0773at 780.278 kb on + strand, within B158DRAFT_0773at 780.281 kb on - strand, within B158DRAFT_0773at 780.303 kb on - strand, within B158DRAFT_0773at 780.346 kb on + strand, within B158DRAFT_0773at 780.373 kb on - strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.430 kb on + strand, within B158DRAFT_0773at 780.473 kb on - strandat 780.479 kb on + strandat 780.485 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.497 kb on - strandat 780.503 kb on + strandat 780.503 kb on + strandat 780.511 kb on - strandat 780.561 kb on + strandat 780.569 kb on - strandat 780.619 kb on + strandat 780.635 kb on - strandat 780.647 kb on + strandat 780.674 kb on - strandat 780.698 kb on + strand, within B158DRAFT_0774at 780.698 kb on + strand, within B158DRAFT_0774at 780.727 kb on + strand, within B158DRAFT_0774at 780.727 kb on + strand, within B158DRAFT_0774at 780.734 kb on - strand, within B158DRAFT_0774at 780.745 kb on + strand, within B158DRAFT_0774at 780.749 kb on - strand, within B158DRAFT_0774at 780.818 kb on + strand, within B158DRAFT_0774at 780.846 kb on + strand, within B158DRAFT_0774at 780.846 kb on + strand, within B158DRAFT_0774at 780.848 kb on - strand, within B158DRAFT_0774at 780.861 kb on + strand, within B158DRAFT_0774at 780.870 kb on - strand, within B158DRAFT_0774at 780.872 kb on + strand, within B158DRAFT_0774at 780.890 kb on + strand, within B158DRAFT_0774at 780.890 kb on + strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.898 kb on - strand, within B158DRAFT_0774at 780.908 kb on + strand, within B158DRAFT_0774at 780.909 kb on + strand, within B158DRAFT_0774at 780.930 kb on + strand, within B158DRAFT_0774at 780.968 kb on + strand, within B158DRAFT_0774at 780.968 kb on + strand, within B158DRAFT_0774at 780.973 kb on + strand, within B158DRAFT_0774at 780.973 kb on + strand, within B158DRAFT_0774at 780.976 kb on - strand, within B158DRAFT_0774at 780.976 kb on - strand, within B158DRAFT_0774at 780.983 kb on + strand, within B158DRAFT_0774at 780.993 kb on + strand, within B158DRAFT_0774at 781.056 kb on + strandat 781.091 kb on - strandat 781.099 kb on - strandat 781.123 kb on - strand, within B158DRAFT_0775at 781.192 kb on - strand, within B158DRAFT_0775at 781.212 kb on - strand, within B158DRAFT_0775at 781.308 kb on + strand, within B158DRAFT_0775at 781.311 kb on - strand, within B158DRAFT_0775at 781.315 kb on + strand, within B158DRAFT_0775at 781.339 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.352 kb on - strand, within B158DRAFT_0775at 781.428 kb on + strandat 781.436 kb on - strandat 782.057 kb on - strandat 782.063 kb on + strandat 782.071 kb on - strandat 782.083 kb on + strandat 782.083 kb on + strandat 782.091 kb on - strandat 782.091 kb on - strandat 782.133 kb on - strand, within B158DRAFT_0777at 782.133 kb on - strand, within B158DRAFT_0777at 782.139 kb on + strand, within B158DRAFT_0777at 782.270 kb on + strand, within B158DRAFT_0777at 782.270 kb on + strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.306 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.314 kb on + strand, within B158DRAFT_0777at 782.322 kb on - strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.340 kb on - strand, within B158DRAFT_0777at 782.340 kb on - strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.405 kb on - strand, within B158DRAFT_0777

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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780,123 + B158DRAFT_0773 0.44 -0.3
780,128 + B158DRAFT_0773 0.45 -0.0
780,128 + B158DRAFT_0773 0.45 +0.7
780,131 - B158DRAFT_0773 0.45 -0.1
780,136 - B158DRAFT_0773 0.46 +0.2
780,136 - B158DRAFT_0773 0.46 -0.4
780,171 - B158DRAFT_0773 0.51 -0.7
780,171 - B158DRAFT_0773 0.51 +0.3
780,188 + B158DRAFT_0773 0.53 +0.1
780,188 + B158DRAFT_0773 0.53 -0.0
780,233 + B158DRAFT_0773 0.59 -1.1
780,233 + B158DRAFT_0773 0.59 -0.2
780,278 + B158DRAFT_0773 0.65 +0.0
780,281 - B158DRAFT_0773 0.65 -0.0
780,303 - B158DRAFT_0773 0.68 -0.0
780,346 + B158DRAFT_0773 0.73 -1.3
780,373 - B158DRAFT_0773 0.77 -0.5
780,430 + B158DRAFT_0773 0.84 -0.4
780,430 + B158DRAFT_0773 0.84 -0.3
780,473 - +0.1
780,479 + -0.5
780,485 - +0.3
780,497 - +0.1
780,497 - -0.1
780,497 - -0.1
780,497 - -0.5
780,497 - -0.1
780,503 + +0.3
780,503 + -0.1
780,511 - -0.2
780,561 + +0.8
780,569 - -0.1
780,619 + -0.3
780,635 - -0.1
780,647 + +0.1
780,674 - +0.1
780,698 + B158DRAFT_0774 0.11 -0.1
780,698 + B158DRAFT_0774 0.11 -0.1
780,727 + B158DRAFT_0774 0.19 +0.2
780,727 + B158DRAFT_0774 0.19 -0.6
780,734 - B158DRAFT_0774 0.21 -0.2
780,745 + B158DRAFT_0774 0.24 -0.5
780,749 - B158DRAFT_0774 0.25 +0.6
780,818 + B158DRAFT_0774 0.43 +0.8
780,846 + B158DRAFT_0774 0.51 +0.3
780,846 + B158DRAFT_0774 0.51 +0.3
780,848 - B158DRAFT_0774 0.51 -0.0
780,861 + B158DRAFT_0774 0.54 -0.4
780,870 - B158DRAFT_0774 0.57 +0.3
780,872 + B158DRAFT_0774 0.57 +1.9
780,890 + B158DRAFT_0774 0.62 -0.0
780,890 + B158DRAFT_0774 0.62 +0.3
780,898 - B158DRAFT_0774 0.64 +2.0
780,898 - B158DRAFT_0774 0.64 -0.3
780,898 - B158DRAFT_0774 0.64 -0.1
780,908 + B158DRAFT_0774 0.67 -0.3
780,909 + B158DRAFT_0774 0.67 +0.6
780,930 + B158DRAFT_0774 0.73 -0.2
780,968 + B158DRAFT_0774 0.83 -0.1
780,968 + B158DRAFT_0774 0.83 +1.5
780,973 + B158DRAFT_0774 0.84 -0.1
780,973 + B158DRAFT_0774 0.84 +0.6
780,976 - B158DRAFT_0774 0.85 +0.0
780,976 - B158DRAFT_0774 0.85 -0.0
780,983 + B158DRAFT_0774 0.87 +0.4
780,993 + B158DRAFT_0774 0.89 +0.1
781,056 + +0.3
781,091 - -1.6
781,099 - +0.4
781,123 - B158DRAFT_0775 0.14 +0.0
781,192 - B158DRAFT_0775 0.32 -0.4
781,212 - B158DRAFT_0775 0.38 -1.1
781,308 + B158DRAFT_0775 0.63 -0.1
781,311 - B158DRAFT_0775 0.64 +0.4
781,315 + B158DRAFT_0775 0.65 -0.5
781,339 + B158DRAFT_0775 0.72 -0.1
781,344 + B158DRAFT_0775 0.73 -0.0
781,344 + B158DRAFT_0775 0.73 -0.1
781,352 - B158DRAFT_0775 0.75 -1.1
781,428 + +0.2
781,436 - -0.1
782,057 - -0.3
782,063 + -0.2
782,071 - -0.3
782,083 + +0.0
782,083 + -0.2
782,091 - +0.1
782,091 - -0.5
782,133 - B158DRAFT_0777 0.15 -0.7
782,133 - B158DRAFT_0777 0.15 +0.0
782,139 + B158DRAFT_0777 0.17 -1.2
782,270 + B158DRAFT_0777 0.48 +0.0
782,270 + B158DRAFT_0777 0.48 -0.3
782,278 - B158DRAFT_0777 0.50 +0.3
782,278 - B158DRAFT_0777 0.50 -0.7
782,278 - B158DRAFT_0777 0.50 -0.1
782,278 - B158DRAFT_0777 0.50 -1.6
782,278 - B158DRAFT_0777 0.50 -0.1
782,303 + B158DRAFT_0777 0.56 +0.4
782,303 + B158DRAFT_0777 0.56 -0.2
782,303 + B158DRAFT_0777 0.56 +0.3
782,303 + B158DRAFT_0777 0.56 +0.2
782,303 + B158DRAFT_0777 0.56 -0.4
782,303 + B158DRAFT_0777 0.56 -0.8
782,303 + B158DRAFT_0777 0.56 +0.4
782,306 - B158DRAFT_0777 0.57 -0.6
782,311 - B158DRAFT_0777 0.58 -0.3
782,311 - B158DRAFT_0777 0.58 +0.1
782,311 - B158DRAFT_0777 0.58 -0.0
782,311 - B158DRAFT_0777 0.58 -0.7
782,311 - B158DRAFT_0777 0.58 -0.1
782,311 - B158DRAFT_0777 0.58 -0.5
782,314 + B158DRAFT_0777 0.59 +0.2
782,322 - B158DRAFT_0777 0.60 -0.1
782,332 + B158DRAFT_0777 0.63 -0.6
782,332 + B158DRAFT_0777 0.63 +0.3
782,332 + B158DRAFT_0777 0.63 +0.1
782,340 - B158DRAFT_0777 0.65 +1.6
782,340 - B158DRAFT_0777 0.65 +0.0
782,342 + B158DRAFT_0777 0.65 -0.2
782,342 + B158DRAFT_0777 0.65 -0.0
782,342 + B158DRAFT_0777 0.65 +0.0
782,342 + B158DRAFT_0777 0.65 -0.1
782,350 - B158DRAFT_0777 0.67 -0.4
782,350 - B158DRAFT_0777 0.67 +1.4
782,350 - B158DRAFT_0777 0.67 -0.8
782,350 - B158DRAFT_0777 0.67 +0.3
782,350 - B158DRAFT_0777 0.67 +0.1
782,350 - B158DRAFT_0777 0.67 +0.3
782,405 - B158DRAFT_0777 0.80 +0.3

Or see this region's nucleotide sequence