Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0537

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0535 and B158DRAFT_0536 are separated by 49 nucleotidesB158DRAFT_0536 and B158DRAFT_0537 overlap by 14 nucleotidesB158DRAFT_0537 and B158DRAFT_0538 are separated by 10 nucleotidesB158DRAFT_0538 and B158DRAFT_0540 are separated by 599 nucleotides B158DRAFT_0535: B158DRAFT_0535 - hypothetical protein, at 541,391 to 542,353 _0535 B158DRAFT_0536: B158DRAFT_0536 - hypothetical protein, at 542,403 to 543,242 _0536 B158DRAFT_0537: B158DRAFT_0537 - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 543,229 to 544,422 _0537 B158DRAFT_0538: B158DRAFT_0538 - Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides, at 544,433 to 544,714 _0538 B158DRAFT_0540: B158DRAFT_0540 - ABC-type Fe3+ transport system, periplasmic component, at 545,314 to 546,405 _0540 Position (kb) 543 544 545Strain fitness (log2 ratio) -2 -1 0 1 2at 542.274 kb on - strandat 542.290 kb on - strandat 542.323 kb on + strandat 542.343 kb on + strandat 542.448 kb on + strandat 542.449 kb on + strandat 542.465 kb on + strandat 542.524 kb on - strand, within B158DRAFT_0536at 542.540 kb on + strand, within B158DRAFT_0536at 542.548 kb on + strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.555 kb on + strand, within B158DRAFT_0536at 542.556 kb on - strand, within B158DRAFT_0536at 542.563 kb on - strand, within B158DRAFT_0536at 542.563 kb on - strand, within B158DRAFT_0536at 542.575 kb on - strand, within B158DRAFT_0536at 542.601 kb on + strand, within B158DRAFT_0536at 542.615 kb on - strand, within B158DRAFT_0536at 542.616 kb on - strand, within B158DRAFT_0536at 542.728 kb on + strand, within B158DRAFT_0536at 542.736 kb on - strand, within B158DRAFT_0536at 542.743 kb on + strand, within B158DRAFT_0536at 542.743 kb on + strand, within B158DRAFT_0536at 542.786 kb on + strand, within B158DRAFT_0536at 542.794 kb on - strand, within B158DRAFT_0536at 542.823 kb on + strand, within B158DRAFT_0536at 542.838 kb on + strand, within B158DRAFT_0536at 542.838 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.953 kb on - strand, within B158DRAFT_0536at 542.953 kb on - strand, within B158DRAFT_0536at 542.969 kb on + strand, within B158DRAFT_0536at 543.089 kb on - strand, within B158DRAFT_0536at 543.130 kb on + strand, within B158DRAFT_0536at 543.211 kb on + strandat 543.211 kb on + strandat 543.237 kb on + strandat 543.237 kb on + strandat 544.432 kb on + strandat 544.468 kb on - strand, within B158DRAFT_0538at 544.540 kb on + strand, within B158DRAFT_0538at 544.552 kb on + strand, within B158DRAFT_0538at 544.552 kb on + strand, within B158DRAFT_0538at 544.552 kb on + strand, within B158DRAFT_0538at 544.570 kb on - strand, within B158DRAFT_0538at 544.570 kb on - strand, within B158DRAFT_0538at 544.611 kb on - strand, within B158DRAFT_0538at 544.625 kb on + strand, within B158DRAFT_0538at 544.633 kb on + strand, within B158DRAFT_0538at 544.641 kb on - strand, within B158DRAFT_0538at 544.672 kb on + strand, within B158DRAFT_0538at 544.672 kb on + strand, within B158DRAFT_0538at 544.672 kb on + strand, within B158DRAFT_0538at 544.680 kb on - strand, within B158DRAFT_0538at 544.846 kb on - strandat 544.885 kb on + strandat 544.893 kb on - strandat 544.896 kb on - strandat 544.902 kb on - strandat 544.904 kb on + strandat 544.904 kb on + strandat 544.932 kb on - strandat 545.001 kb on - strandat 545.047 kb on - strandat 545.080 kb on + strandat 545.080 kb on + strandat 545.088 kb on - strandat 545.088 kb on - strandat 545.095 kb on + strandat 545.108 kb on + strandat 545.116 kb on - strandat 545.120 kb on + strandat 545.125 kb on + strandat 545.174 kb on + strandat 545.182 kb on + strandat 545.182 kb on - strandat 545.182 kb on - strandat 545.236 kb on + strandat 545.244 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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542,274 - -0.6
542,290 - -0.4
542,323 + +0.1
542,343 + +0.5
542,448 + -0.6
542,449 + +0.3
542,465 + -0.2
542,524 - B158DRAFT_0536 0.14 -0.3
542,540 + B158DRAFT_0536 0.16 +0.0
542,548 + B158DRAFT_0536 0.17 -0.2
542,548 - B158DRAFT_0536 0.17 -0.1
542,548 - B158DRAFT_0536 0.17 -0.1
542,548 - B158DRAFT_0536 0.17 -0.1
542,555 + B158DRAFT_0536 0.18 -0.3
542,556 - B158DRAFT_0536 0.18 +1.1
542,563 - B158DRAFT_0536 0.19 +0.1
542,563 - B158DRAFT_0536 0.19 -0.4
542,575 - B158DRAFT_0536 0.20 -0.1
542,601 + B158DRAFT_0536 0.24 -0.1
542,615 - B158DRAFT_0536 0.25 -0.2
542,616 - B158DRAFT_0536 0.25 -0.8
542,728 + B158DRAFT_0536 0.39 -0.1
542,736 - B158DRAFT_0536 0.40 -0.5
542,743 + B158DRAFT_0536 0.40 -0.2
542,743 + B158DRAFT_0536 0.40 -0.6
542,786 + B158DRAFT_0536 0.46 +0.0
542,794 - B158DRAFT_0536 0.47 -0.2
542,823 + B158DRAFT_0536 0.50 -0.3
542,838 + B158DRAFT_0536 0.52 -0.8
542,838 + B158DRAFT_0536 0.52 +0.2
542,935 + B158DRAFT_0536 0.63 -0.2
542,935 + B158DRAFT_0536 0.63 +0.1
542,935 + B158DRAFT_0536 0.63 -0.2
542,935 + B158DRAFT_0536 0.63 -1.6
542,935 + B158DRAFT_0536 0.63 -0.2
542,943 - B158DRAFT_0536 0.64 -0.9
542,943 - B158DRAFT_0536 0.64 -1.6
542,943 - B158DRAFT_0536 0.64 +0.0
542,943 - B158DRAFT_0536 0.64 -2.1
542,945 + B158DRAFT_0536 0.65 -0.6
542,945 + B158DRAFT_0536 0.65 +0.0
542,945 + B158DRAFT_0536 0.65 +0.0
542,953 - B158DRAFT_0536 0.65 +0.4
542,953 - B158DRAFT_0536 0.65 +0.4
542,969 + B158DRAFT_0536 0.67 -0.0
543,089 - B158DRAFT_0536 0.82 -1.6
543,130 + B158DRAFT_0536 0.87 -0.2
543,211 + -0.0
543,211 + -0.5
543,237 + -2.1
543,237 + -0.5
544,432 + -1.3
544,468 - B158DRAFT_0538 0.12 +0.4
544,540 + B158DRAFT_0538 0.38 -0.0
544,552 + B158DRAFT_0538 0.42 +0.5
544,552 + B158DRAFT_0538 0.42 +0.1
544,552 + B158DRAFT_0538 0.42 -0.1
544,570 - B158DRAFT_0538 0.49 -0.4
544,570 - B158DRAFT_0538 0.49 -0.6
544,611 - B158DRAFT_0538 0.63 +0.3
544,625 + B158DRAFT_0538 0.68 -0.6
544,633 + B158DRAFT_0538 0.71 -0.1
544,641 - B158DRAFT_0538 0.74 +0.1
544,672 + B158DRAFT_0538 0.85 +2.7
544,672 + B158DRAFT_0538 0.85 +0.3
544,672 + B158DRAFT_0538 0.85 +1.1
544,680 - B158DRAFT_0538 0.88 -0.1
544,846 - +0.0
544,885 + +0.3
544,893 - -0.1
544,896 - +0.5
544,902 - -0.4
544,904 + +0.3
544,904 + -0.1
544,932 - -0.1
545,001 - +0.4
545,047 - -0.5
545,080 + -0.6
545,080 + -0.1
545,088 - -0.6
545,088 - -0.0
545,095 + +0.6
545,108 + +1.1
545,116 - +0.1
545,120 + -0.4
545,125 + +0.4
545,174 + +0.0
545,182 + -0.1
545,182 - -0.3
545,182 - -0.2
545,236 + -0.7
545,244 - -0.9

Or see this region's nucleotide sequence