Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0258

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0255 and B158DRAFT_0256 are separated by 46 nucleotidesB158DRAFT_0256 and B158DRAFT_0257 are separated by 288 nucleotidesB158DRAFT_0257 and B158DRAFT_0258 are separated by 7 nucleotidesB158DRAFT_0258 and B158DRAFT_0259 are separated by 9 nucleotidesB158DRAFT_0259 and B158DRAFT_0260 are separated by 26 nucleotides B158DRAFT_0255: B158DRAFT_0255 - Uncharacterized enzyme of heme biosynthesis, at 261,180 to 262,406 _0255 B158DRAFT_0256: B158DRAFT_0256 - hypothetical protein, at 262,453 to 262,686 _0256 B158DRAFT_0257: B158DRAFT_0257 - conserved hypothetical metal-binding protein, at 262,975 to 263,238 _0257 B158DRAFT_0258: B158DRAFT_0258 - transporter, NhaC family (TC 2.A.35), at 263,246 to 264,598 _0258 B158DRAFT_0259: B158DRAFT_0259 - shikimate 5-dehydrogenase, at 264,608 to 265,402 _0259 B158DRAFT_0260: B158DRAFT_0260 - Putative protein-S-isoprenylcysteine methyltransferase, at 265,429 to 265,890 _0260 Position (kb) 263 264 265Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 262.269 kb on + strand, within B158DRAFT_0255at 262.269 kb on - strand, within B158DRAFT_0255at 262.271 kb on + strand, within B158DRAFT_0255at 262.276 kb on + strand, within B158DRAFT_0255at 262.279 kb on - strand, within B158DRAFT_0255at 262.306 kb on + strandat 262.488 kb on + strand, within B158DRAFT_0256at 262.488 kb on + strand, within B158DRAFT_0256at 262.496 kb on - strand, within B158DRAFT_0256at 262.496 kb on - strand, within B158DRAFT_0256at 262.575 kb on - strand, within B158DRAFT_0256at 262.620 kb on - strand, within B158DRAFT_0256at 262.620 kb on - strand, within B158DRAFT_0256at 262.628 kb on - strand, within B158DRAFT_0256at 262.628 kb on - strand, within B158DRAFT_0256at 262.690 kb on + strandat 262.734 kb on + strandat 262.749 kb on + strandat 262.821 kb on + strandat 262.929 kb on + strandat 262.929 kb on + strandat 262.929 kb on + strandat 262.931 kb on - strandat 262.933 kb on + strandat 262.937 kb on - strandat 262.937 kb on - strandat 262.937 kb on - strandat 262.942 kb on - strandat 262.950 kb on + strandat 262.981 kb on - strandat 263.132 kb on - strand, within B158DRAFT_0257at 263.132 kb on - strand, within B158DRAFT_0257at 263.251 kb on - strandat 263.272 kb on - strandat 263.272 kb on - strandat 263.304 kb on + strandat 263.345 kb on + strandat 263.351 kb on + strandat 263.374 kb on - strandat 263.376 kb on - strandat 263.539 kb on - strand, within B158DRAFT_0258at 263.564 kb on + strand, within B158DRAFT_0258at 263.581 kb on - strand, within B158DRAFT_0258at 263.784 kb on - strand, within B158DRAFT_0258at 263.819 kb on - strand, within B158DRAFT_0258at 263.848 kb on + strand, within B158DRAFT_0258at 263.848 kb on + strand, within B158DRAFT_0258at 263.856 kb on - strand, within B158DRAFT_0258at 263.880 kb on - strand, within B158DRAFT_0258at 264.164 kb on + strand, within B158DRAFT_0258at 264.164 kb on + strand, within B158DRAFT_0258at 264.172 kb on - strand, within B158DRAFT_0258at 264.172 kb on - strand, within B158DRAFT_0258at 264.188 kb on - strand, within B158DRAFT_0258at 264.200 kb on + strand, within B158DRAFT_0258at 264.284 kb on - strand, within B158DRAFT_0258at 264.284 kb on - strand, within B158DRAFT_0258at 264.345 kb on + strand, within B158DRAFT_0258at 264.430 kb on - strand, within B158DRAFT_0258at 264.517 kb on + strandat 264.534 kb on + strandat 264.569 kb on - strandat 264.650 kb on - strandat 264.661 kb on + strandat 264.747 kb on - strand, within B158DRAFT_0259at 264.804 kb on + strand, within B158DRAFT_0259at 264.812 kb on - strand, within B158DRAFT_0259at 264.838 kb on - strand, within B158DRAFT_0259at 264.844 kb on - strand, within B158DRAFT_0259at 264.852 kb on - strand, within B158DRAFT_0259at 264.855 kb on + strand, within B158DRAFT_0259at 264.863 kb on - strand, within B158DRAFT_0259at 264.863 kb on - strand, within B158DRAFT_0259at 264.894 kb on - strand, within B158DRAFT_0259at 264.939 kb on + strand, within B158DRAFT_0259at 264.947 kb on - strand, within B158DRAFT_0259at 264.956 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 264.998 kb on + strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.006 kb on - strand, within B158DRAFT_0259at 265.017 kb on + strand, within B158DRAFT_0259at 265.034 kb on + strand, within B158DRAFT_0259at 265.056 kb on + strand, within B158DRAFT_0259at 265.056 kb on + strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.064 kb on - strand, within B158DRAFT_0259at 265.080 kb on - strand, within B158DRAFT_0259at 265.291 kb on + strand, within B158DRAFT_0259at 265.299 kb on - strand, within B158DRAFT_0259at 265.316 kb on + strand, within B158DRAFT_0259at 265.350 kb on + strandat 265.351 kb on - strandat 265.358 kb on - strandat 265.493 kb on + strand, within B158DRAFT_0260at 265.501 kb on - strand, within B158DRAFT_0260at 265.521 kb on + strand, within B158DRAFT_0260at 265.576 kb on - strand, within B158DRAFT_0260

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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262,269 + B158DRAFT_0255 0.89 +0.6
262,269 - B158DRAFT_0255 0.89 +0.6
262,271 + B158DRAFT_0255 0.89 +2.1
262,276 + B158DRAFT_0255 0.89 -0.9
262,279 - B158DRAFT_0255 0.90 +0.1
262,306 + -0.6
262,488 + B158DRAFT_0256 0.15 -0.4
262,488 + B158DRAFT_0256 0.15 -0.2
262,496 - B158DRAFT_0256 0.18 -0.3
262,496 - B158DRAFT_0256 0.18 -0.2
262,575 - B158DRAFT_0256 0.52 +0.2
262,620 - B158DRAFT_0256 0.71 -0.1
262,620 - B158DRAFT_0256 0.71 -0.5
262,628 - B158DRAFT_0256 0.75 +0.0
262,628 - B158DRAFT_0256 0.75 -0.4
262,690 + +0.1
262,734 + +0.3
262,749 + -0.3
262,821 + -0.1
262,929 + +0.0
262,929 + -0.1
262,929 + -0.2
262,931 - +0.7
262,933 + -0.3
262,937 - +0.2
262,937 - -0.3
262,937 - -0.1
262,942 - -0.1
262,950 + +0.0
262,981 - -0.3
263,132 - B158DRAFT_0257 0.59 +0.3
263,132 - B158DRAFT_0257 0.59 +0.6
263,251 - -2.2
263,272 - -2.7
263,272 - -0.1
263,304 + -1.1
263,345 + -0.3
263,351 + -0.1
263,374 - -0.4
263,376 - -1.6
263,539 - B158DRAFT_0258 0.22 -1.3
263,564 + B158DRAFT_0258 0.24 -0.4
263,581 - B158DRAFT_0258 0.25 -1.7
263,784 - B158DRAFT_0258 0.40 -0.3
263,819 - B158DRAFT_0258 0.42 -1.6
263,848 + B158DRAFT_0258 0.44 -0.2
263,848 + B158DRAFT_0258 0.44 -0.3
263,856 - B158DRAFT_0258 0.45 -0.5
263,880 - B158DRAFT_0258 0.47 -1.6
264,164 + B158DRAFT_0258 0.68 -1.2
264,164 + B158DRAFT_0258 0.68 -0.3
264,172 - B158DRAFT_0258 0.68 -1.5
264,172 - B158DRAFT_0258 0.68 -1.4
264,188 - B158DRAFT_0258 0.70 -2.8
264,200 + B158DRAFT_0258 0.71 -0.7
264,284 - B158DRAFT_0258 0.77 -1.2
264,284 - B158DRAFT_0258 0.77 -0.1
264,345 + B158DRAFT_0258 0.81 -0.3
264,430 - B158DRAFT_0258 0.88 -0.6
264,517 + -1.3
264,534 + -0.2
264,569 - +0.0
264,650 - -1.8
264,661 + -2.5
264,747 - B158DRAFT_0259 0.17 -1.8
264,804 + B158DRAFT_0259 0.25 -2.3
264,812 - B158DRAFT_0259 0.26 -1.3
264,838 - B158DRAFT_0259 0.29 -3.2
264,844 - B158DRAFT_0259 0.30 -1.4
264,852 - B158DRAFT_0259 0.31 -2.0
264,855 + B158DRAFT_0259 0.31 -2.3
264,863 - B158DRAFT_0259 0.32 -2.3
264,863 - B158DRAFT_0259 0.32 -1.3
264,894 - B158DRAFT_0259 0.36 -2.5
264,939 + B158DRAFT_0259 0.42 -2.7
264,947 - B158DRAFT_0259 0.43 -1.2
264,956 + B158DRAFT_0259 0.44 -1.6
264,998 + B158DRAFT_0259 0.49 -1.3
264,998 + B158DRAFT_0259 0.49 -1.6
264,998 + B158DRAFT_0259 0.49 -1.0
264,998 + B158DRAFT_0259 0.49 -1.2
264,998 + B158DRAFT_0259 0.49 -1.4
264,998 + B158DRAFT_0259 0.49 -2.2
264,998 + B158DRAFT_0259 0.49 -1.8
264,998 + B158DRAFT_0259 0.49 -1.7
265,006 - B158DRAFT_0259 0.50 -2.4
265,006 - B158DRAFT_0259 0.50 -2.2
265,006 - B158DRAFT_0259 0.50 -1.7
265,006 - B158DRAFT_0259 0.50 -2.3
265,017 + B158DRAFT_0259 0.51 -2.2
265,034 + B158DRAFT_0259 0.54 -1.7
265,056 + B158DRAFT_0259 0.56 -2.7
265,056 + B158DRAFT_0259 0.56 -2.1
265,064 - B158DRAFT_0259 0.57 -1.2
265,064 - B158DRAFT_0259 0.57 -0.5
265,064 - B158DRAFT_0259 0.57 -1.4
265,064 - B158DRAFT_0259 0.57 -2.2
265,080 - B158DRAFT_0259 0.59 -1.8
265,291 + B158DRAFT_0259 0.86 -3.3
265,299 - B158DRAFT_0259 0.87 -2.1
265,316 + B158DRAFT_0259 0.89 -2.1
265,350 + +0.5
265,351 - -0.5
265,358 - -1.6
265,493 + B158DRAFT_0260 0.14 -0.5
265,501 - B158DRAFT_0260 0.16 -0.2
265,521 + B158DRAFT_0260 0.20 -0.2
265,576 - B158DRAFT_0260 0.32 -0.2

Or see this region's nucleotide sequence