Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0002

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0001 and B158DRAFT_0002 are separated by 184 nucleotidesB158DRAFT_0002 and B158DRAFT_0003 are separated by 235 nucleotides B158DRAFT_0001: B158DRAFT_0001 - Subtilisin-like serine proteases, at 487 to 1,860 _0001 B158DRAFT_0002: B158DRAFT_0002 - tyrosyl-tRNA synthetase (EC 6.1.1.1), at 2,045 to 3,241 _0002 B158DRAFT_0003: B158DRAFT_0003 - Membrane proteins related to metalloendopeptidases, at 3,477 to 4,988 _0003 Position (kb) 2 3 4Strain fitness (log2 ratio) -2 -1 0 1at 1.047 kb on - strand, within B158DRAFT_0001at 1.064 kb on + strand, within B158DRAFT_0001at 1.072 kb on - strand, within B158DRAFT_0001at 1.123 kb on + strand, within B158DRAFT_0001at 1.123 kb on + strand, within B158DRAFT_0001at 1.131 kb on - strand, within B158DRAFT_0001at 1.167 kb on + strand, within B158DRAFT_0001at 1.175 kb on - strand, within B158DRAFT_0001at 1.175 kb on - strand, within B158DRAFT_0001at 1.207 kb on + strand, within B158DRAFT_0001at 1.210 kb on - strand, within B158DRAFT_0001at 1.215 kb on - strand, within B158DRAFT_0001at 1.272 kb on + strand, within B158DRAFT_0001at 1.280 kb on - strand, within B158DRAFT_0001at 1.316 kb on - strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.355 kb on + strand, within B158DRAFT_0001at 1.356 kb on - strand, within B158DRAFT_0001at 1.356 kb on - strand, within B158DRAFT_0001at 1.360 kb on + strand, within B158DRAFT_0001at 1.365 kb on + strand, within B158DRAFT_0001at 1.368 kb on - strand, within B158DRAFT_0001at 1.368 kb on - strand, within B158DRAFT_0001at 1.376 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.413 kb on - strand, within B158DRAFT_0001at 1.419 kb on + strand, within B158DRAFT_0001at 1.419 kb on + strand, within B158DRAFT_0001at 1.420 kb on + strand, within B158DRAFT_0001at 1.463 kb on - strand, within B158DRAFT_0001at 1.480 kb on - strand, within B158DRAFT_0001at 1.572 kb on + strand, within B158DRAFT_0001at 1.692 kb on - strand, within B158DRAFT_0001at 1.707 kb on + strand, within B158DRAFT_0001at 1.707 kb on + strand, within B158DRAFT_0001at 1.709 kb on + strand, within B158DRAFT_0001at 1.715 kb on - strand, within B158DRAFT_0001at 1.717 kb on - strand, within B158DRAFT_0001at 1.748 kb on - strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.778 kb on - strandat 1.780 kb on + strandat 1.783 kb on - strandat 1.794 kb on - strandat 1.817 kb on + strandat 1.825 kb on - strandat 1.841 kb on - strandat 1.896 kb on + strandat 1.901 kb on + strandat 1.904 kb on - strandat 1.906 kb on + strandat 3.278 kb on - strandat 3.297 kb on - strandat 3.297 kb on - strandat 3.912 kb on + strand, within B158DRAFT_0003at 3.912 kb on + strand, within B158DRAFT_0003at 3.920 kb on - strand, within B158DRAFT_0003at 3.920 kb on - strand, within B158DRAFT_0003at 3.920 kb on - strand, within B158DRAFT_0003at 3.920 kb on - strand, within B158DRAFT_0003at 3.927 kb on + strand, within B158DRAFT_0003at 3.927 kb on + strand, within B158DRAFT_0003at 3.927 kb on + strand, within B158DRAFT_0003at 3.935 kb on - strand, within B158DRAFT_0003at 4.191 kb on + strand, within B158DRAFT_0003

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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1,047 - B158DRAFT_0001 0.41 +0.3
1,064 + B158DRAFT_0001 0.42 +0.4
1,072 - B158DRAFT_0001 0.43 -0.0
1,123 + B158DRAFT_0001 0.46 +0.0
1,123 + B158DRAFT_0001 0.46 +0.0
1,131 - B158DRAFT_0001 0.47 +0.1
1,167 + B158DRAFT_0001 0.49 +0.1
1,175 - B158DRAFT_0001 0.50 +0.2
1,175 - B158DRAFT_0001 0.50 -1.4
1,207 + B158DRAFT_0001 0.52 +0.3
1,210 - B158DRAFT_0001 0.53 -0.3
1,215 - B158DRAFT_0001 0.53 +0.5
1,272 + B158DRAFT_0001 0.57 +0.4
1,280 - B158DRAFT_0001 0.58 +1.1
1,316 - B158DRAFT_0001 0.60 +0.4
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 +0.2
1,318 + B158DRAFT_0001 0.60 +0.3
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 +0.0
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 -0.6
1,318 + B158DRAFT_0001 0.60 -0.6
1,318 + B158DRAFT_0001 0.60 +0.0
1,318 + B158DRAFT_0001 0.60 -0.9
1,318 + B158DRAFT_0001 0.60 +0.5
1,318 + B158DRAFT_0001 0.60 +0.3
1,318 + B158DRAFT_0001 0.60 -0.6
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 +0.3
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 +0.4
1,318 + B158DRAFT_0001 0.60 -0.2
1,318 + B158DRAFT_0001 0.60 -1.1
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 +0.2
1,318 + B158DRAFT_0001 0.60 -1.1
1,318 + B158DRAFT_0001 0.60 -0.5
1,318 + B158DRAFT_0001 0.60 +0.2
1,318 + B158DRAFT_0001 0.60 +0.5
1,318 + B158DRAFT_0001 0.60 -1.7
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 -0.4
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -0.8
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 +0.0
1,318 + B158DRAFT_0001 0.60 -0.6
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -0.7
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 +0.2
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.1
1,326 - B158DRAFT_0001 0.61 -0.0
1,326 - B158DRAFT_0001 0.61 -0.5
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 +1.0
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 -0.6
1,326 - B158DRAFT_0001 0.61 +0.0
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 +0.2
1,326 - B158DRAFT_0001 0.61 +0.2
1,326 - B158DRAFT_0001 0.61 +0.1
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.0
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 +0.3
1,326 - B158DRAFT_0001 0.61 -0.1
1,326 - B158DRAFT_0001 0.61 -1.1
1,326 - B158DRAFT_0001 0.61 +0.5
1,326 - B158DRAFT_0001 0.61 +0.5
1,326 - B158DRAFT_0001 0.61 -0.0
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.7
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 +0.4
1,326 - B158DRAFT_0001 0.61 -0.5
1,326 - B158DRAFT_0001 0.61 -0.6
1,326 - B158DRAFT_0001 0.61 -0.7
1,348 + B158DRAFT_0001 0.63 +0.2
1,348 + B158DRAFT_0001 0.63 -0.3
1,348 + B158DRAFT_0001 0.63 -0.5
1,355 + B158DRAFT_0001 0.63 -0.0
1,356 - B158DRAFT_0001 0.63 +0.3
1,356 - B158DRAFT_0001 0.63 -0.4
1,360 + B158DRAFT_0001 0.64 -0.2
1,365 + B158DRAFT_0001 0.64 +0.1
1,368 - B158DRAFT_0001 0.64 +0.5
1,368 - B158DRAFT_0001 0.64 -0.3
1,376 + B158DRAFT_0001 0.65 -0.0
1,405 + B158DRAFT_0001 0.67 +0.1
1,405 + B158DRAFT_0001 0.67 -0.0
1,405 + B158DRAFT_0001 0.67 +0.5
1,413 - B158DRAFT_0001 0.67 -0.4
1,419 + B158DRAFT_0001 0.68 +0.2
1,419 + B158DRAFT_0001 0.68 -0.4
1,420 + B158DRAFT_0001 0.68 +0.2
1,463 - B158DRAFT_0001 0.71 -2.0
1,480 - B158DRAFT_0001 0.72 -0.8
1,572 + B158DRAFT_0001 0.79 +0.2
1,692 - B158DRAFT_0001 0.88 -0.1
1,707 + B158DRAFT_0001 0.89 -0.2
1,707 + B158DRAFT_0001 0.89 +0.3
1,709 + B158DRAFT_0001 0.89 +0.4
1,715 - B158DRAFT_0001 0.89 -0.0
1,717 - B158DRAFT_0001 0.90 +0.9
1,748 - +0.2
1,775 + -0.7
1,775 + +0.0
1,775 + +0.4
1,775 + -0.0
1,775 + +0.1
1,775 + +0.7
1,775 + -0.1
1,778 - +0.1
1,780 + +0.0
1,783 - +0.8
1,794 - -0.7
1,817 + +0.5
1,825 - -0.3
1,841 - -0.0
1,896 + -0.4
1,901 + -0.2
1,904 - -0.4
1,906 + -0.1
3,278 - -0.3
3,297 - -0.6
3,297 - -0.9
3,912 + B158DRAFT_0003 0.29 -2.1
3,912 + B158DRAFT_0003 0.29 -0.6
3,920 - B158DRAFT_0003 0.29 -1.7
3,920 - B158DRAFT_0003 0.29 -2.1
3,920 - B158DRAFT_0003 0.29 -2.6
3,920 - B158DRAFT_0003 0.29 -2.6
3,927 + B158DRAFT_0003 0.30 -0.8
3,927 + B158DRAFT_0003 0.30 -1.3
3,927 + B158DRAFT_0003 0.30 -1.1
3,935 - B158DRAFT_0003 0.30 -1.9
4,191 + B158DRAFT_0003 0.47 -1.4

Or see this region's nucleotide sequence