Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2325

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2324 and B158DRAFT_2325 are separated by 218 nucleotidesB158DRAFT_2325 and B158DRAFT_2326 are separated by 7 nucleotidesB158DRAFT_2326 and B158DRAFT_2327 are separated by 145 nucleotides B158DRAFT_2324: B158DRAFT_2324 - Protease II, at 489,823 to 492,027 _2324 B158DRAFT_2325: B158DRAFT_2325 - histidinol-phosphate aminotransferase, at 492,246 to 493,346 _2325 B158DRAFT_2326: B158DRAFT_2326 - cytidylate kinase, at 493,354 to 494,040 _2326 B158DRAFT_2327: B158DRAFT_2327 - ribosomal protein S1, at 494,186 to 495,853 _2327 Position (kb) 492 493 494Strain fitness (log2 ratio) -2 -1 0 1at 491.259 kb on - strand, within B158DRAFT_2324at 491.269 kb on - strand, within B158DRAFT_2324at 491.300 kb on - strand, within B158DRAFT_2324at 491.300 kb on - strand, within B158DRAFT_2324at 491.399 kb on - strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.401 kb on + strand, within B158DRAFT_2324at 491.409 kb on - strand, within B158DRAFT_2324at 491.422 kb on + strand, within B158DRAFT_2324at 491.448 kb on + strand, within B158DRAFT_2324at 491.448 kb on + strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.456 kb on - strand, within B158DRAFT_2324at 491.458 kb on + strand, within B158DRAFT_2324at 491.498 kb on + strand, within B158DRAFT_2324at 491.537 kb on - strand, within B158DRAFT_2324at 491.665 kb on - strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.711 kb on + strand, within B158DRAFT_2324at 491.719 kb on - strand, within B158DRAFT_2324at 491.719 kb on - strand, within B158DRAFT_2324at 491.721 kb on - strand, within B158DRAFT_2324at 491.781 kb on - strand, within B158DRAFT_2324at 491.804 kb on + strand, within B158DRAFT_2324at 491.812 kb on - strandat 491.817 kb on - strandat 491.889 kb on - strandat 491.903 kb on + strandat 491.925 kb on + strandat 491.933 kb on - strandat 491.933 kb on - strandat 491.979 kb on + strandat 491.989 kb on + strandat 491.994 kb on + strandat 491.997 kb on - strandat 492.010 kb on + strandat 492.018 kb on - strandat 492.018 kb on - strandat 492.018 kb on - strandat 492.078 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.116 kb on + strandat 492.124 kb on - strandat 492.124 kb on - strandat 492.124 kb on - strandat 492.143 kb on - strandat 492.166 kb on + strandat 492.217 kb on + strandat 492.394 kb on + strand, within B158DRAFT_2325at 492.440 kb on + strand, within B158DRAFT_2325at 492.957 kb on + strand, within B158DRAFT_2325at 493.169 kb on + strand, within B158DRAFT_2325at 493.223 kb on + strand, within B158DRAFT_2325at 493.285 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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491,259 - B158DRAFT_2324 0.65 +0.0
491,269 - B158DRAFT_2324 0.66 -0.5
491,300 - B158DRAFT_2324 0.67 -0.2
491,300 - B158DRAFT_2324 0.67 -0.5
491,399 - B158DRAFT_2324 0.71 +0.1
491,401 + B158DRAFT_2324 0.72 +0.1
491,401 + B158DRAFT_2324 0.72 -0.1
491,401 + B158DRAFT_2324 0.72 -0.8
491,401 + B158DRAFT_2324 0.72 -0.0
491,409 - B158DRAFT_2324 0.72 -0.4
491,422 + B158DRAFT_2324 0.73 -0.6
491,448 + B158DRAFT_2324 0.74 -1.6
491,448 + B158DRAFT_2324 0.74 -0.3
491,456 - B158DRAFT_2324 0.74 -0.6
491,456 - B158DRAFT_2324 0.74 +0.3
491,456 - B158DRAFT_2324 0.74 -0.3
491,458 + B158DRAFT_2324 0.74 -0.2
491,498 + B158DRAFT_2324 0.76 -0.2
491,537 - B158DRAFT_2324 0.78 -0.1
491,665 - B158DRAFT_2324 0.84 -0.2
491,711 + B158DRAFT_2324 0.86 -0.6
491,711 + B158DRAFT_2324 0.86 -0.5
491,711 + B158DRAFT_2324 0.86 -0.1
491,719 - B158DRAFT_2324 0.86 -0.4
491,719 - B158DRAFT_2324 0.86 +0.3
491,721 - B158DRAFT_2324 0.86 -0.2
491,781 - B158DRAFT_2324 0.89 -0.3
491,804 + B158DRAFT_2324 0.90 -0.6
491,812 - +0.3
491,817 - -0.7
491,889 - +0.7
491,903 + +0.5
491,925 + -0.5
491,933 - -0.1
491,933 - -0.4
491,979 + -0.0
491,989 + -0.5
491,994 + +0.3
491,997 - +0.3
492,010 + -1.1
492,018 - +0.0
492,018 - -0.3
492,018 - -1.0
492,078 + -0.6
492,116 + +0.1
492,116 + -0.6
492,116 + -0.0
492,116 + -0.2
492,116 + -0.4
492,116 + +0.2
492,124 - -0.3
492,124 - +0.9
492,124 - -1.2
492,143 - -0.2
492,166 + -0.2
492,217 + +0.3
492,394 + B158DRAFT_2325 0.13 -1.0
492,440 + B158DRAFT_2325 0.18 -1.5
492,957 + B158DRAFT_2325 0.65 -2.1
493,169 + B158DRAFT_2325 0.84 -1.4
493,223 + B158DRAFT_2325 0.89 -0.7
493,285 + -0.4

Or see this region's nucleotide sequence