Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2105 and B158DRAFT_2106 are separated by 2 nucleotides B158DRAFT_2106 and B158DRAFT_2107 are separated by 31 nucleotides B158DRAFT_2107 and B158DRAFT_2108 are separated by 45 nucleotides
B158DRAFT_2105: B158DRAFT_2105 - Predicted periplasmic or secreted lipoprotein, at 238,868 to 239,395
_2105
B158DRAFT_2106: B158DRAFT_2106 - Phosphoheptose isomerase, at 239,398 to 239,985
_2106
B158DRAFT_2107: B158DRAFT_2107 - TIGR00252 family protein, at 240,017 to 240,385
_2107
B158DRAFT_2108: B158DRAFT_2108 - Putative lipoprotein, at 240,431 to 242,269
_2108
Position (kb) 240
241 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 239.079 kb on + strand, within B158DRAFT_2105 at 239.087 kb on - strand, within B158DRAFT_2105 at 239.087 kb on - strand, within B158DRAFT_2105 at 239.150 kb on - strand, within B158DRAFT_2105 at 239.293 kb on - strand, within B158DRAFT_2105 at 239.300 kb on + strand, within B158DRAFT_2105 at 239.300 kb on + strand, within B158DRAFT_2105 at 239.414 kb on + strand at 239.524 kb on + strand, within B158DRAFT_2106 at 239.672 kb on - strand, within B158DRAFT_2106 at 239.673 kb on - strand, within B158DRAFT_2106 at 239.705 kb on + strand, within B158DRAFT_2106 at 239.993 kb on - strand at 240.151 kb on - strand, within B158DRAFT_2107 at 240.294 kb on + strand, within B158DRAFT_2107 at 240.294 kb on + strand, within B158DRAFT_2107 at 240.294 kb on + strand, within B158DRAFT_2107 at 240.302 kb on - strand, within B158DRAFT_2107 at 240.350 kb on + strand at 240.358 kb on - strand at 240.360 kb on - strand at 240.366 kb on - strand at 240.373 kb on + strand at 240.373 kb on + strand at 240.381 kb on - strand at 240.381 kb on - strand at 240.381 kb on - strand at 240.430 kb on + strand at 240.443 kb on - strand at 240.443 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 239,079 + B158DRAFT_2105 0.40 -0.0 239,087 - B158DRAFT_2105 0.41 +0.1 239,087 - B158DRAFT_2105 0.41 -0.2 239,150 - B158DRAFT_2105 0.53 -0.8 239,293 - B158DRAFT_2105 0.80 -0.4 239,300 + B158DRAFT_2105 0.82 -0.2 239,300 + B158DRAFT_2105 0.82 +0.0 239,414 + -2.8 239,524 + B158DRAFT_2106 0.21 -3.3 239,672 - B158DRAFT_2106 0.47 -2.3 239,673 - B158DRAFT_2106 0.47 -3.4 239,705 + B158DRAFT_2106 0.52 -2.6 239,993 - -1.6 240,151 - B158DRAFT_2107 0.36 -0.3 240,294 + B158DRAFT_2107 0.75 -0.4 240,294 + B158DRAFT_2107 0.75 -1.3 240,294 + B158DRAFT_2107 0.75 -1.4 240,302 - B158DRAFT_2107 0.77 +0.1 240,350 + -0.4 240,358 - -0.1 240,360 - -0.7 240,366 - +0.7 240,373 + -0.4 240,373 + -0.6 240,381 - -2.5 240,381 - -1.0 240,381 - -1.2 240,430 + -0.3 240,443 - -1.3 240,443 - -1.8
Or see this region's nucleotide sequence