Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1666

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1664 and B158DRAFT_1665 overlap by 4 nucleotidesB158DRAFT_1665 and B158DRAFT_1666 are separated by 50 nucleotidesB158DRAFT_1666 and B158DRAFT_1667 are separated by 15 nucleotides B158DRAFT_1664: B158DRAFT_1664 - copper-resistance protein, CopA family, at 1,735,474 to 1,737,321 _1664 B158DRAFT_1665: B158DRAFT_1665 - Uncharacterized protein involved in copper resistance, at 1,737,318 to 1,738,181 _1665 B158DRAFT_1666: B158DRAFT_1666 - Calcium/calmodulin dependent protein kinase II Association., at 1,738,232 to 1,738,939 _1666 B158DRAFT_1667: B158DRAFT_1667 - hypothetical protein, at 1,738,955 to 1,739,548 _1667 Position (kb) 1738 1739Strain fitness (log2 ratio) -2 -1 0 1at 1737.233 kb on + strandat 1737.236 kb on - strandat 1737.243 kb on + strandat 1737.249 kb on - strandat 1737.279 kb on - strandat 1737.279 kb on - strandat 1737.300 kb on - strandat 1737.323 kb on + strandat 1737.323 kb on + strandat 1737.331 kb on - strandat 1737.364 kb on - strandat 1737.366 kb on + strandat 1737.366 kb on + strandat 1737.366 kb on + strandat 1737.366 kb on + strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.374 kb on - strandat 1737.413 kb on + strand, within B158DRAFT_1665at 1737.413 kb on + strand, within B158DRAFT_1665at 1737.443 kb on + strand, within B158DRAFT_1665at 1737.485 kb on + strand, within B158DRAFT_1665at 1737.493 kb on + strand, within B158DRAFT_1665at 1737.493 kb on + strand, within B158DRAFT_1665at 1737.493 kb on + strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.501 kb on - strand, within B158DRAFT_1665at 1737.511 kb on - strand, within B158DRAFT_1665at 1737.513 kb on - strand, within B158DRAFT_1665at 1737.517 kb on + strand, within B158DRAFT_1665at 1737.525 kb on - strand, within B158DRAFT_1665at 1737.656 kb on - strand, within B158DRAFT_1665at 1737.695 kb on - strand, within B158DRAFT_1665at 1737.695 kb on - strand, within B158DRAFT_1665at 1737.710 kb on - strand, within B158DRAFT_1665at 1737.717 kb on + strand, within B158DRAFT_1665at 1737.722 kb on + strand, within B158DRAFT_1665at 1737.722 kb on + strand, within B158DRAFT_1665at 1737.730 kb on - strand, within B158DRAFT_1665at 1737.730 kb on - strand, within B158DRAFT_1665at 1737.730 kb on - strand, within B158DRAFT_1665at 1737.792 kb on + strand, within B158DRAFT_1665at 1737.792 kb on + strand, within B158DRAFT_1665at 1737.792 kb on + strand, within B158DRAFT_1665at 1737.792 kb on + strand, within B158DRAFT_1665at 1737.813 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.829 kb on + strand, within B158DRAFT_1665at 1737.837 kb on - strand, within B158DRAFT_1665at 1737.837 kb on - strand, within B158DRAFT_1665at 1737.837 kb on - strand, within B158DRAFT_1665at 1737.837 kb on - strand, within B158DRAFT_1665at 1737.844 kb on - strand, within B158DRAFT_1665at 1737.916 kb on + strand, within B158DRAFT_1665at 1737.921 kb on + strand, within B158DRAFT_1665at 1737.924 kb on - strand, within B158DRAFT_1665at 1737.950 kb on - strand, within B158DRAFT_1665at 1737.950 kb on - strand, within B158DRAFT_1665at 1737.950 kb on - strand, within B158DRAFT_1665at 1737.955 kb on - strand, within B158DRAFT_1665at 1737.965 kb on - strand, within B158DRAFT_1665at 1737.999 kb on + strand, within B158DRAFT_1665at 1738.000 kb on + strand, within B158DRAFT_1665at 1738.000 kb on + strand, within B158DRAFT_1665at 1738.008 kb on - strand, within B158DRAFT_1665at 1738.008 kb on - strand, within B158DRAFT_1665at 1738.008 kb on - strand, within B158DRAFT_1665at 1738.093 kb on + strand, within B158DRAFT_1665at 1738.112 kb on + strandat 1738.136 kb on - strandat 1738.230 kb on - strandat 1738.264 kb on + strandat 1738.292 kb on + strandat 1738.344 kb on + strand, within B158DRAFT_1666at 1738.405 kb on - strand, within B158DRAFT_1666at 1738.417 kb on + strand, within B158DRAFT_1666at 1738.425 kb on - strand, within B158DRAFT_1666at 1738.519 kb on + strand, within B158DRAFT_1666at 1738.519 kb on + strand, within B158DRAFT_1666at 1738.519 kb on + strand, within B158DRAFT_1666at 1738.519 kb on + strand, within B158DRAFT_1666at 1738.519 kb on + strand, within B158DRAFT_1666at 1738.527 kb on - strand, within B158DRAFT_1666at 1738.527 kb on - strand, within B158DRAFT_1666at 1738.527 kb on - strand, within B158DRAFT_1666at 1738.527 kb on - strand, within B158DRAFT_1666at 1738.559 kb on - strand, within B158DRAFT_1666at 1738.703 kb on + strand, within B158DRAFT_1666at 1739.016 kb on + strand, within B158DRAFT_1667at 1739.024 kb on - strand, within B158DRAFT_1667at 1739.055 kb on + strand, within B158DRAFT_1667at 1739.071 kb on + strand, within B158DRAFT_1667at 1739.118 kb on - strand, within B158DRAFT_1667at 1739.133 kb on - strand, within B158DRAFT_1667at 1739.214 kb on - strand, within B158DRAFT_1667at 1739.274 kb on - strand, within B158DRAFT_1667at 1739.301 kb on + strand, within B158DRAFT_1667at 1739.341 kb on + strand, within B158DRAFT_1667at 1739.341 kb on + strand, within B158DRAFT_1667at 1739.349 kb on - strand, within B158DRAFT_1667at 1739.360 kb on + strand, within B158DRAFT_1667at 1739.392 kb on + strand, within B158DRAFT_1667at 1739.400 kb on - strand, within B158DRAFT_1667at 1739.513 kb on + strandat 1739.542 kb on + strandat 1739.550 kb on - strandat 1739.550 kb on - strandat 1739.586 kb on - strandat 1739.586 kb on - strandat 1739.633 kb on + strandat 1739.753 kb on + strandat 1739.771 kb on - strandat 1739.851 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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1,737,233 + -0.4
1,737,236 - -0.1
1,737,243 + -0.2
1,737,249 - +0.3
1,737,279 - -1.8
1,737,279 - +0.9
1,737,300 - +0.4
1,737,323 + -0.6
1,737,323 + +0.1
1,737,331 - +0.4
1,737,364 - -0.2
1,737,366 + +0.8
1,737,366 + -0.2
1,737,366 + -0.4
1,737,366 + -0.7
1,737,374 - -0.4
1,737,374 - -0.5
1,737,374 - -0.3
1,737,374 - +0.1
1,737,374 - +0.7
1,737,374 - +0.0
1,737,374 - +0.5
1,737,374 - +0.0
1,737,374 - -0.0
1,737,374 - -0.1
1,737,374 - -0.6
1,737,413 + B158DRAFT_1665 0.11 +0.1
1,737,413 + B158DRAFT_1665 0.11 +0.4
1,737,443 + B158DRAFT_1665 0.14 -0.7
1,737,485 + B158DRAFT_1665 0.19 -0.1
1,737,493 + B158DRAFT_1665 0.20 -0.6
1,737,493 + B158DRAFT_1665 0.20 -0.3
1,737,493 + B158DRAFT_1665 0.20 +0.0
1,737,501 - B158DRAFT_1665 0.21 -1.0
1,737,501 - B158DRAFT_1665 0.21 +0.3
1,737,501 - B158DRAFT_1665 0.21 +0.1
1,737,501 - B158DRAFT_1665 0.21 -0.2
1,737,501 - B158DRAFT_1665 0.21 -0.1
1,737,501 - B158DRAFT_1665 0.21 -0.1
1,737,511 - B158DRAFT_1665 0.22 +0.5
1,737,513 - B158DRAFT_1665 0.23 +0.2
1,737,517 + B158DRAFT_1665 0.23 -0.6
1,737,525 - B158DRAFT_1665 0.24 +0.3
1,737,656 - B158DRAFT_1665 0.39 -0.9
1,737,695 - B158DRAFT_1665 0.44 -0.4
1,737,695 - B158DRAFT_1665 0.44 -0.3
1,737,710 - B158DRAFT_1665 0.45 +0.5
1,737,717 + B158DRAFT_1665 0.46 -0.5
1,737,722 + B158DRAFT_1665 0.47 -0.3
1,737,722 + B158DRAFT_1665 0.47 +0.2
1,737,730 - B158DRAFT_1665 0.48 -0.7
1,737,730 - B158DRAFT_1665 0.48 +0.4
1,737,730 - B158DRAFT_1665 0.48 +1.0
1,737,792 + B158DRAFT_1665 0.55 -0.5
1,737,792 + B158DRAFT_1665 0.55 -0.5
1,737,792 + B158DRAFT_1665 0.55 -0.4
1,737,792 + B158DRAFT_1665 0.55 -0.0
1,737,813 + B158DRAFT_1665 0.57 -1.2
1,737,829 + B158DRAFT_1665 0.59 +0.6
1,737,829 + B158DRAFT_1665 0.59 +0.3
1,737,829 + B158DRAFT_1665 0.59 -0.7
1,737,829 + B158DRAFT_1665 0.59 -0.4
1,737,829 + B158DRAFT_1665 0.59 -1.0
1,737,829 + B158DRAFT_1665 0.59 -0.3
1,737,837 - B158DRAFT_1665 0.60 +0.5
1,737,837 - B158DRAFT_1665 0.60 -0.4
1,737,837 - B158DRAFT_1665 0.60 +0.1
1,737,837 - B158DRAFT_1665 0.60 +0.4
1,737,844 - B158DRAFT_1665 0.61 +0.6
1,737,916 + B158DRAFT_1665 0.69 -0.7
1,737,921 + B158DRAFT_1665 0.70 +0.4
1,737,924 - B158DRAFT_1665 0.70 -0.4
1,737,950 - B158DRAFT_1665 0.73 -0.8
1,737,950 - B158DRAFT_1665 0.73 +0.3
1,737,950 - B158DRAFT_1665 0.73 +1.0
1,737,955 - B158DRAFT_1665 0.74 -0.6
1,737,965 - B158DRAFT_1665 0.75 +0.6
1,737,999 + B158DRAFT_1665 0.79 +0.4
1,738,000 + B158DRAFT_1665 0.79 -0.0
1,738,000 + B158DRAFT_1665 0.79 -0.2
1,738,008 - B158DRAFT_1665 0.80 +0.4
1,738,008 - B158DRAFT_1665 0.80 -0.2
1,738,008 - B158DRAFT_1665 0.80 +0.3
1,738,093 + B158DRAFT_1665 0.90 +0.5
1,738,112 + +0.8
1,738,136 - -1.2
1,738,230 - +0.6
1,738,264 + +0.3
1,738,292 + +0.0
1,738,344 + B158DRAFT_1666 0.16 +0.6
1,738,405 - B158DRAFT_1666 0.24 +0.8
1,738,417 + B158DRAFT_1666 0.26 +0.2
1,738,425 - B158DRAFT_1666 0.27 +0.4
1,738,519 + B158DRAFT_1666 0.41 -0.4
1,738,519 + B158DRAFT_1666 0.41 +0.2
1,738,519 + B158DRAFT_1666 0.41 -1.0
1,738,519 + B158DRAFT_1666 0.41 +0.8
1,738,519 + B158DRAFT_1666 0.41 -0.4
1,738,527 - B158DRAFT_1666 0.42 +0.2
1,738,527 - B158DRAFT_1666 0.42 -0.2
1,738,527 - B158DRAFT_1666 0.42 +0.4
1,738,527 - B158DRAFT_1666 0.42 -0.2
1,738,559 - B158DRAFT_1666 0.46 +0.4
1,738,703 + B158DRAFT_1666 0.67 -0.5
1,739,016 + B158DRAFT_1667 0.10 -0.2
1,739,024 - B158DRAFT_1667 0.12 -1.2
1,739,055 + B158DRAFT_1667 0.17 -0.3
1,739,071 + B158DRAFT_1667 0.20 -1.3
1,739,118 - B158DRAFT_1667 0.27 -0.1
1,739,133 - B158DRAFT_1667 0.30 +0.3
1,739,214 - B158DRAFT_1667 0.44 +0.2
1,739,274 - B158DRAFT_1667 0.54 -0.2
1,739,301 + B158DRAFT_1667 0.58 +0.2
1,739,341 + B158DRAFT_1667 0.65 -0.1
1,739,341 + B158DRAFT_1667 0.65 +0.3
1,739,349 - B158DRAFT_1667 0.66 -0.0
1,739,360 + B158DRAFT_1667 0.68 -1.1
1,739,392 + B158DRAFT_1667 0.74 -0.7
1,739,400 - B158DRAFT_1667 0.75 +0.1
1,739,513 + -0.5
1,739,542 + +0.1
1,739,550 - -0.3
1,739,550 - -0.1
1,739,586 - -0.0
1,739,586 - +0.0
1,739,633 + +0.4
1,739,753 + -0.9
1,739,771 - -0.3
1,739,851 + +0.4

Or see this region's nucleotide sequence