Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1299 and B158DRAFT_1300 are separated by 460 nucleotides B158DRAFT_1300 and B158DRAFT_1301 overlap by 1 nucleotides
B158DRAFT_1299: B158DRAFT_1299 - Uncharacterized conserved protein, at 1,344,825 to 1,345,946
_1299
B158DRAFT_1300: B158DRAFT_1300 - Kef-type potassium/proton antiporter accessory protein, CPA2 family (TC 2.A.37.1), at 1,346,407 to 1,346,970
_1300
B158DRAFT_1301: B158DRAFT_1301 - Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1), at 1,346,970 to 1,348,859
_1301
Position (kb)
1346
1347 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1345.431 kb on + strand, within B158DRAFT_1299 at 1345.460 kb on + strand, within B158DRAFT_1299 at 1345.481 kb on + strand, within B158DRAFT_1299 at 1345.489 kb on - strand, within B158DRAFT_1299 at 1345.489 kb on - strand, within B158DRAFT_1299 at 1345.492 kb on + strand, within B158DRAFT_1299 at 1345.503 kb on - strand, within B158DRAFT_1299 at 1345.550 kb on - strand, within B158DRAFT_1299 at 1345.629 kb on - strand, within B158DRAFT_1299 at 1345.630 kb on + strand, within B158DRAFT_1299 at 1345.638 kb on - strand, within B158DRAFT_1299 at 1345.654 kb on + strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.695 kb on + strand, within B158DRAFT_1299 at 1345.968 kb on + strand at 1345.968 kb on + strand at 1345.968 kb on + strand at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.976 kb on - strand at 1345.980 kb on - strand at 1346.170 kb on + strand at 1346.246 kb on + strand at 1346.246 kb on + strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.371 kb on - strand at 1346.419 kb on + strand at 1346.496 kb on + strand, within B158DRAFT_1300 at 1346.560 kb on + strand, within B158DRAFT_1300 at 1346.621 kb on + strand, within B158DRAFT_1300 at 1346.629 kb on - strand, within B158DRAFT_1300 at 1346.629 kb on - strand, within B158DRAFT_1300 at 1346.632 kb on - strand, within B158DRAFT_1300 at 1346.642 kb on - strand, within B158DRAFT_1300 at 1346.731 kb on + strand, within B158DRAFT_1300 at 1346.793 kb on + strand, within B158DRAFT_1300 at 1346.801 kb on - strand, within B158DRAFT_1300 at 1346.801 kb on - strand, within B158DRAFT_1300 at 1346.837 kb on + strand, within B158DRAFT_1300 at 1346.837 kb on + strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.845 kb on - strand, within B158DRAFT_1300 at 1346.876 kb on - strand, within B158DRAFT_1300 at 1346.879 kb on + strand, within B158DRAFT_1300 at 1346.906 kb on + strand, within B158DRAFT_1300 at 1346.906 kb on + strand, within B158DRAFT_1300 at 1346.912 kb on - strand, within B158DRAFT_1300 at 1346.912 kb on - strand, within B158DRAFT_1300 at 1346.914 kb on + strand at 1346.914 kb on + strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.914 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.922 kb on - strand at 1346.927 kb on + strand at 1347.018 kb on + strand at 1347.026 kb on - strand at 1347.036 kb on - strand at 1347.036 kb on - strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.051 kb on + strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.059 kb on - strand at 1347.066 kb on - strand at 1347.066 kb on - strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.121 kb on + strand at 1347.138 kb on + strand at 1347.146 kb on - strand at 1347.187 kb on + strand, within B158DRAFT_1301 at 1347.187 kb on + strand, within B158DRAFT_1301 at 1347.195 kb on - strand, within B158DRAFT_1301 at 1347.195 kb on - strand, within B158DRAFT_1301 at 1347.240 kb on - strand, within B158DRAFT_1301 at 1347.276 kb on - strand, within B158DRAFT_1301 at 1347.317 kb on - strand, within B158DRAFT_1301 at 1347.326 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.395 kb on + strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.403 kb on - strand, within B158DRAFT_1301 at 1347.482 kb on + strand, within B158DRAFT_1301 at 1347.490 kb on - strand, within B158DRAFT_1301 at 1347.531 kb on + strand, within B158DRAFT_1301 at 1347.571 kb on - strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.682 kb on + strand, within B158DRAFT_1301 at 1347.690 kb on - strand, within B158DRAFT_1301 at 1347.695 kb on - strand, within B158DRAFT_1301 at 1347.742 kb on + strand, within B158DRAFT_1301 at 1347.776 kb on + strand, within B158DRAFT_1301 at 1347.777 kb on - strand, within B158DRAFT_1301
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 1,345,431 + B158DRAFT_1299 0.54 -2.8 1,345,460 + B158DRAFT_1299 0.57 -2.3 1,345,481 + B158DRAFT_1299 0.58 -1.3 1,345,489 - B158DRAFT_1299 0.59 -1.4 1,345,489 - B158DRAFT_1299 0.59 -2.1 1,345,492 + B158DRAFT_1299 0.59 -0.9 1,345,503 - B158DRAFT_1299 0.60 -1.8 1,345,550 - B158DRAFT_1299 0.65 -1.6 1,345,629 - B158DRAFT_1299 0.72 -1.8 1,345,630 + B158DRAFT_1299 0.72 -2.3 1,345,638 - B158DRAFT_1299 0.72 -1.1 1,345,654 + B158DRAFT_1299 0.74 -2.3 1,345,662 - B158DRAFT_1299 0.75 -2.5 1,345,662 - B158DRAFT_1299 0.75 -1.7 1,345,662 - B158DRAFT_1299 0.75 -2.1 1,345,685 + B158DRAFT_1299 0.77 -2.2 1,345,685 + B158DRAFT_1299 0.77 -1.3 1,345,685 + B158DRAFT_1299 0.77 -2.9 1,345,685 + B158DRAFT_1299 0.77 -2.0 1,345,685 + B158DRAFT_1299 0.77 -1.1 1,345,685 + B158DRAFT_1299 0.77 -2.5 1,345,685 + B158DRAFT_1299 0.77 -2.8 1,345,685 + B158DRAFT_1299 0.77 -2.1 1,345,685 + B158DRAFT_1299 0.77 -1.7 1,345,685 + B158DRAFT_1299 0.77 -1.9 1,345,685 + B158DRAFT_1299 0.77 -2.2 1,345,693 - B158DRAFT_1299 0.77 -2.6 1,345,693 - B158DRAFT_1299 0.77 -1.5 1,345,693 - B158DRAFT_1299 0.77 -2.1 1,345,693 - B158DRAFT_1299 0.77 -1.8 1,345,693 - B158DRAFT_1299 0.77 -1.7 1,345,693 - B158DRAFT_1299 0.77 -1.5 1,345,695 + B158DRAFT_1299 0.78 -2.0 1,345,968 + -1.0 1,345,968 + -0.9 1,345,968 + -0.5 1,345,976 - -1.3 1,345,976 - -0.5 1,345,976 - -1.8 1,345,976 - -1.2 1,345,980 - -2.4 1,346,170 + -0.7 1,346,246 + -1.7 1,346,246 + -0.7 1,346,371 - -0.1 1,346,371 - -2.0 1,346,371 - +0.4 1,346,371 - -0.3 1,346,419 + -0.3 1,346,496 + B158DRAFT_1300 0.16 -1.0 1,346,560 + B158DRAFT_1300 0.27 -0.7 1,346,621 + B158DRAFT_1300 0.38 -0.5 1,346,629 - B158DRAFT_1300 0.39 +0.0 1,346,629 - B158DRAFT_1300 0.39 -0.3 1,346,632 - B158DRAFT_1300 0.40 -0.0 1,346,642 - B158DRAFT_1300 0.42 -0.0 1,346,731 + B158DRAFT_1300 0.57 +0.3 1,346,793 + B158DRAFT_1300 0.68 +0.3 1,346,801 - B158DRAFT_1300 0.70 +0.1 1,346,801 - B158DRAFT_1300 0.70 +0.2 1,346,837 + B158DRAFT_1300 0.76 +0.1 1,346,837 + B158DRAFT_1300 0.76 +0.1 1,346,845 - B158DRAFT_1300 0.78 -1.2 1,346,845 - B158DRAFT_1300 0.78 +0.3 1,346,845 - B158DRAFT_1300 0.78 -0.2 1,346,845 - B158DRAFT_1300 0.78 -0.0 1,346,876 - B158DRAFT_1300 0.83 -1.1 1,346,879 + B158DRAFT_1300 0.84 -0.9 1,346,906 + B158DRAFT_1300 0.88 -0.0 1,346,906 + B158DRAFT_1300 0.88 -0.5 1,346,912 - B158DRAFT_1300 0.90 -0.3 1,346,912 - B158DRAFT_1300 0.90 -0.0 1,346,914 + -0.4 1,346,914 + -0.5 1,346,914 - -0.1 1,346,914 - -0.3 1,346,914 - +0.1 1,346,914 - -0.2 1,346,914 - +0.5 1,346,922 - -0.6 1,346,922 - -0.5 1,346,922 - -0.4 1,346,922 - +0.8 1,346,927 + -2.1 1,347,018 + +0.3 1,347,026 - +1.2 1,347,036 - -0.1 1,347,036 - -0.2 1,347,051 + -0.5 1,347,051 + -1.1 1,347,051 + -0.5 1,347,051 + +0.1 1,347,051 + +1.2 1,347,051 + -0.4 1,347,059 - +0.0 1,347,059 - -0.4 1,347,059 - +0.4 1,347,059 - +0.3 1,347,059 - +0.7 1,347,059 - -0.4 1,347,066 - +0.1 1,347,066 - -0.0 1,347,121 + -0.0 1,347,121 + -0.2 1,347,121 + -0.1 1,347,121 + -0.1 1,347,121 + +0.1 1,347,138 + +0.5 1,347,146 - +1.4 1,347,187 + B158DRAFT_1301 0.11 +0.1 1,347,187 + B158DRAFT_1301 0.11 +0.3 1,347,195 - B158DRAFT_1301 0.12 +0.0 1,347,195 - B158DRAFT_1301 0.12 +0.3 1,347,240 - B158DRAFT_1301 0.14 +0.3 1,347,276 - B158DRAFT_1301 0.16 -0.4 1,347,317 - B158DRAFT_1301 0.18 -0.5 1,347,326 + B158DRAFT_1301 0.19 -0.5 1,347,395 + B158DRAFT_1301 0.22 +0.2 1,347,395 + B158DRAFT_1301 0.22 +0.1 1,347,395 + B158DRAFT_1301 0.22 +0.1 1,347,403 - B158DRAFT_1301 0.23 -0.7 1,347,403 - B158DRAFT_1301 0.23 +0.0 1,347,403 - B158DRAFT_1301 0.23 -0.1 1,347,482 + B158DRAFT_1301 0.27 -0.1 1,347,490 - B158DRAFT_1301 0.28 -0.5 1,347,531 + B158DRAFT_1301 0.30 -0.0 1,347,571 - B158DRAFT_1301 0.32 -0.0 1,347,682 + B158DRAFT_1301 0.38 -0.2 1,347,682 + B158DRAFT_1301 0.38 -1.1 1,347,682 + B158DRAFT_1301 0.38 -1.4 1,347,682 + B158DRAFT_1301 0.38 +0.6 1,347,690 - B158DRAFT_1301 0.38 -0.3 1,347,695 - B158DRAFT_1301 0.38 -0.1 1,347,742 + B158DRAFT_1301 0.41 -0.3 1,347,776 + B158DRAFT_1301 0.43 -0.8 1,347,777 - B158DRAFT_1301 0.43 -0.1
Or see this region's nucleotide sequence