Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0697 and B158DRAFT_0698 overlap by 4 nucleotides B158DRAFT_0698 and B158DRAFT_0699 overlap by 4 nucleotides B158DRAFT_0699 and B158DRAFT_0700 overlap by 22 nucleotides B158DRAFT_0700 and B158DRAFT_0701 are separated by 7 nucleotides
B158DRAFT_0697: B158DRAFT_0697 - Type II secretory pathway, component PulL, at 698,417 to 699,652
_0697
B158DRAFT_0698: B158DRAFT_0698 - Type II secretory pathway, component PulM, at 699,649 to 700,131
_0698
B158DRAFT_0699: B158DRAFT_0699 - type II secretion system protein N (GspN), at 700,128 to 700,874
_0699
B158DRAFT_0700: B158DRAFT_0700 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 700,853 to 701,527
_0700
B158DRAFT_0701: B158DRAFT_0701 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 701,535 to 702,083
_0701
Position (kb) 700
701 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 699.136 kb on - strand, within B158DRAFT_0697 at 699.351 kb on + strand, within B158DRAFT_0697 at 699.559 kb on + strand at 699.647 kb on - strand at 699.854 kb on + strand, within B158DRAFT_0698 at 699.890 kb on + strand, within B158DRAFT_0698 at 700.039 kb on + strand, within B158DRAFT_0698 at 700.048 kb on - strand, within B158DRAFT_0698 at 700.069 kb on - strand, within B158DRAFT_0698 at 700.217 kb on - strand, within B158DRAFT_0699 at 700.224 kb on + strand, within B158DRAFT_0699 at 700.224 kb on + strand, within B158DRAFT_0699 at 700.239 kb on - strand, within B158DRAFT_0699 at 700.246 kb on + strand, within B158DRAFT_0699 at 700.327 kb on - strand, within B158DRAFT_0699 at 700.479 kb on + strand, within B158DRAFT_0699 at 700.484 kb on + strand, within B158DRAFT_0699 at 700.487 kb on - strand, within B158DRAFT_0699 at 700.487 kb on - strand, within B158DRAFT_0699 at 700.487 kb on - strand, within B158DRAFT_0699 at 700.487 kb on - strand, within B158DRAFT_0699 at 700.489 kb on + strand, within B158DRAFT_0699 at 700.596 kb on - strand, within B158DRAFT_0699 at 700.600 kb on + strand, within B158DRAFT_0699 at 700.600 kb on + strand, within B158DRAFT_0699 at 700.613 kb on - strand, within B158DRAFT_0699 at 700.649 kb on + strand, within B158DRAFT_0699 at 700.737 kb on - strand, within B158DRAFT_0699 at 700.804 kb on - strand at 700.815 kb on + strand at 700.823 kb on - strand at 700.835 kb on + strand at 700.894 kb on + strand at 700.967 kb on - strand, within B158DRAFT_0700 at 701.013 kb on - strand, within B158DRAFT_0700 at 701.139 kb on + strand, within B158DRAFT_0700 at 701.168 kb on - strand, within B158DRAFT_0700 at 701.212 kb on + strand, within B158DRAFT_0700 at 701.212 kb on + strand, within B158DRAFT_0700 at 701.224 kb on + strand, within B158DRAFT_0700 at 701.232 kb on - strand, within B158DRAFT_0700 at 701.232 kb on - strand, within B158DRAFT_0700 at 701.281 kb on + strand, within B158DRAFT_0700 at 701.281 kb on + strand, within B158DRAFT_0700 at 701.289 kb on - strand, within B158DRAFT_0700 at 701.309 kb on + strand, within B158DRAFT_0700 at 701.434 kb on + strand, within B158DRAFT_0700 at 701.463 kb on - strand at 701.488 kb on - strand at 701.545 kb on - strand at 701.648 kb on + strand, within B158DRAFT_0701 at 701.648 kb on + strand, within B158DRAFT_0701 at 701.648 kb on + strand, within B158DRAFT_0701 at 701.648 kb on + strand, within B158DRAFT_0701 at 701.648 kb on + strand, within B158DRAFT_0701 at 701.648 kb on + strand, within B158DRAFT_0701 at 701.656 kb on - strand, within B158DRAFT_0701 at 701.656 kb on - strand, within B158DRAFT_0701 at 701.688 kb on + strand, within B158DRAFT_0701 at 701.781 kb on + strand, within B158DRAFT_0701 at 701.841 kb on - strand, within B158DRAFT_0701
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 699,136 - B158DRAFT_0697 0.58 +0.4 699,351 + B158DRAFT_0697 0.76 -1.0 699,559 + -0.7 699,647 - -2.3 699,854 + B158DRAFT_0698 0.42 -1.5 699,890 + B158DRAFT_0698 0.50 -1.5 700,039 + B158DRAFT_0698 0.81 -1.5 700,048 - B158DRAFT_0698 0.83 -1.6 700,069 - B158DRAFT_0698 0.87 -2.9 700,217 - B158DRAFT_0699 0.12 -0.2 700,224 + B158DRAFT_0699 0.13 -0.1 700,224 + B158DRAFT_0699 0.13 -1.0 700,239 - B158DRAFT_0699 0.15 -0.0 700,246 + B158DRAFT_0699 0.16 +0.0 700,327 - B158DRAFT_0699 0.27 -0.0 700,479 + B158DRAFT_0699 0.47 -0.1 700,484 + B158DRAFT_0699 0.48 -0.2 700,487 - B158DRAFT_0699 0.48 +0.7 700,487 - B158DRAFT_0699 0.48 +0.2 700,487 - B158DRAFT_0699 0.48 -0.6 700,487 - B158DRAFT_0699 0.48 +1.2 700,489 + B158DRAFT_0699 0.48 -0.1 700,596 - B158DRAFT_0699 0.63 +0.2 700,600 + B158DRAFT_0699 0.63 -1.2 700,600 + B158DRAFT_0699 0.63 -0.0 700,613 - B158DRAFT_0699 0.65 +0.4 700,649 + B158DRAFT_0699 0.70 -0.4 700,737 - B158DRAFT_0699 0.82 +0.2 700,804 - -0.4 700,815 + -0.5 700,823 - +0.0 700,835 + -0.2 700,894 + -0.1 700,967 - B158DRAFT_0700 0.17 -0.5 701,013 - B158DRAFT_0700 0.24 -0.1 701,139 + B158DRAFT_0700 0.42 -0.2 701,168 - B158DRAFT_0700 0.47 -0.5 701,212 + B158DRAFT_0700 0.53 +0.9 701,212 + B158DRAFT_0700 0.53 +0.1 701,224 + B158DRAFT_0700 0.55 +0.3 701,232 - B158DRAFT_0700 0.56 -0.4 701,232 - B158DRAFT_0700 0.56 -0.8 701,281 + B158DRAFT_0700 0.63 -1.1 701,281 + B158DRAFT_0700 0.63 +0.3 701,289 - B158DRAFT_0700 0.65 -0.3 701,309 + B158DRAFT_0700 0.68 +0.0 701,434 + B158DRAFT_0700 0.86 -0.4 701,463 - -0.2 701,488 - -0.1 701,545 - -0.6 701,648 + B158DRAFT_0701 0.21 -0.4 701,648 + B158DRAFT_0701 0.21 -0.6 701,648 + B158DRAFT_0701 0.21 -0.1 701,648 + B158DRAFT_0701 0.21 -0.3 701,648 + B158DRAFT_0701 0.21 -1.3 701,648 + B158DRAFT_0701 0.21 -1.0 701,656 - B158DRAFT_0701 0.22 -0.4 701,656 - B158DRAFT_0701 0.22 -0.0 701,688 + B158DRAFT_0701 0.28 -0.2 701,781 + B158DRAFT_0701 0.45 -0.4 701,841 - B158DRAFT_0701 0.56 -1.1
Or see this region's nucleotide sequence