Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0683

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0681 and B158DRAFT_0682 are separated by 24 nucleotidesB158DRAFT_0682 and B158DRAFT_0683 are separated by 149 nucleotidesB158DRAFT_0683 and B158DRAFT_0684 are separated by 216 nucleotidesB158DRAFT_0684 and B158DRAFT_0685 are separated by 50 nucleotides B158DRAFT_0681: B158DRAFT_0681 - Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides, at 682,257 to 682,553 _0681 B158DRAFT_0682: B158DRAFT_0682 - Disulfide bond formation protein DsbB, at 682,578 to 683,090 _0682 B158DRAFT_0683: B158DRAFT_0683 - Transcriptional accessory protein, at 683,240 to 685,561 _0683 B158DRAFT_0684: B158DRAFT_0684 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 685,778 to 686,500 _0684 B158DRAFT_0685: B158DRAFT_0685 - Signal transduction histidine kinase, at 686,551 to 687,855 _0685 Position (kb) 683 684 685 686Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 682.303 kb on + strand, within B158DRAFT_0681at 682.335 kb on + strand, within B158DRAFT_0681at 682.343 kb on - strand, within B158DRAFT_0681at 682.357 kb on + strand, within B158DRAFT_0681at 682.357 kb on + strand, within B158DRAFT_0681at 682.372 kb on - strand, within B158DRAFT_0681at 682.452 kb on - strand, within B158DRAFT_0681at 682.570 kb on - strandat 682.575 kb on + strandat 682.611 kb on - strandat 682.611 kb on - strandat 682.611 kb on - strandat 682.611 kb on - strandat 682.611 kb on - strandat 682.621 kb on - strandat 682.626 kb on + strandat 682.634 kb on - strand, within B158DRAFT_0682at 682.727 kb on - strand, within B158DRAFT_0682at 682.770 kb on + strand, within B158DRAFT_0682at 682.783 kb on + strand, within B158DRAFT_0682at 682.783 kb on + strand, within B158DRAFT_0682at 682.786 kb on - strand, within B158DRAFT_0682at 682.788 kb on + strand, within B158DRAFT_0682at 682.999 kb on - strand, within B158DRAFT_0682at 683.131 kb on + strandat 683.147 kb on - strandat 683.173 kb on - strandat 683.201 kb on + strandat 683.246 kb on + strandat 683.286 kb on + strandat 683.342 kb on + strandat 683.342 kb on + strandat 683.376 kb on - strandat 683.397 kb on + strandat 683.397 kb on + strandat 683.397 kb on + strandat 683.397 kb on + strandat 683.397 kb on + strandat 683.397 kb on + strandat 683.465 kb on + strandat 683.579 kb on + strand, within B158DRAFT_0683at 683.579 kb on + strand, within B158DRAFT_0683at 683.597 kb on - strand, within B158DRAFT_0683at 683.607 kb on + strand, within B158DRAFT_0683at 683.618 kb on + strand, within B158DRAFT_0683at 683.682 kb on + strand, within B158DRAFT_0683at 683.684 kb on - strand, within B158DRAFT_0683at 683.690 kb on - strand, within B158DRAFT_0683at 683.690 kb on - strand, within B158DRAFT_0683at 683.724 kb on + strand, within B158DRAFT_0683at 683.761 kb on + strand, within B158DRAFT_0683at 683.783 kb on - strand, within B158DRAFT_0683at 683.806 kb on + strand, within B158DRAFT_0683at 683.806 kb on + strand, within B158DRAFT_0683at 683.806 kb on + strand, within B158DRAFT_0683at 683.806 kb on + strand, within B158DRAFT_0683at 683.806 kb on + strand, within B158DRAFT_0683at 683.814 kb on - strand, within B158DRAFT_0683at 683.814 kb on - strand, within B158DRAFT_0683at 683.814 kb on - strand, within B158DRAFT_0683at 683.844 kb on + strand, within B158DRAFT_0683at 683.857 kb on + strand, within B158DRAFT_0683at 683.857 kb on + strand, within B158DRAFT_0683at 683.857 kb on + strand, within B158DRAFT_0683at 683.857 kb on + strand, within B158DRAFT_0683at 683.862 kb on + strand, within B158DRAFT_0683at 683.865 kb on - strand, within B158DRAFT_0683at 683.865 kb on - strand, within B158DRAFT_0683at 683.865 kb on - strand, within B158DRAFT_0683at 683.867 kb on + strand, within B158DRAFT_0683at 683.867 kb on + strand, within B158DRAFT_0683at 683.867 kb on + strand, within B158DRAFT_0683at 683.875 kb on - strand, within B158DRAFT_0683at 683.875 kb on - strand, within B158DRAFT_0683at 683.931 kb on + strand, within B158DRAFT_0683at 683.951 kb on - strand, within B158DRAFT_0683at 683.951 kb on - strand, within B158DRAFT_0683at 683.964 kb on - strand, within B158DRAFT_0683at 684.002 kb on + strand, within B158DRAFT_0683at 684.007 kb on + strand, within B158DRAFT_0683at 684.010 kb on - strand, within B158DRAFT_0683at 684.010 kb on - strand, within B158DRAFT_0683at 684.010 kb on - strand, within B158DRAFT_0683at 684.015 kb on + strand, within B158DRAFT_0683at 684.023 kb on - strand, within B158DRAFT_0683at 684.033 kb on - strand, within B158DRAFT_0683at 684.033 kb on - strand, within B158DRAFT_0683at 684.038 kb on + strand, within B158DRAFT_0683at 684.090 kb on - strand, within B158DRAFT_0683at 684.090 kb on - strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.092 kb on + strand, within B158DRAFT_0683at 684.100 kb on - strand, within B158DRAFT_0683at 684.100 kb on - strand, within B158DRAFT_0683at 684.100 kb on - strand, within B158DRAFT_0683at 684.100 kb on - strand, within B158DRAFT_0683at 684.100 kb on - strand, within B158DRAFT_0683at 684.127 kb on + strand, within B158DRAFT_0683at 684.141 kb on - strand, within B158DRAFT_0683at 684.148 kb on + strand, within B158DRAFT_0683at 684.148 kb on + strand, within B158DRAFT_0683at 684.149 kb on + strand, within B158DRAFT_0683at 684.263 kb on + strand, within B158DRAFT_0683at 684.263 kb on + strand, within B158DRAFT_0683at 684.271 kb on - strand, within B158DRAFT_0683at 684.271 kb on - strand, within B158DRAFT_0683at 684.271 kb on - strand, within B158DRAFT_0683at 684.363 kb on + strand, within B158DRAFT_0683at 684.382 kb on + strand, within B158DRAFT_0683at 684.405 kb on + strand, within B158DRAFT_0683at 684.410 kb on + strand, within B158DRAFT_0683at 684.415 kb on + strand, within B158DRAFT_0683at 684.415 kb on + strand, within B158DRAFT_0683at 684.415 kb on + strand, within B158DRAFT_0683at 684.420 kb on + strand, within B158DRAFT_0683at 684.423 kb on - strand, within B158DRAFT_0683at 684.423 kb on - strand, within B158DRAFT_0683at 684.458 kb on + strand, within B158DRAFT_0683at 684.466 kb on - strand, within B158DRAFT_0683at 684.615 kb on + strand, within B158DRAFT_0683at 684.746 kb on + strand, within B158DRAFT_0683at 684.823 kb on - strand, within B158DRAFT_0683at 684.824 kb on - strand, within B158DRAFT_0683at 684.926 kb on - strand, within B158DRAFT_0683at 684.927 kb on + strand, within B158DRAFT_0683at 684.935 kb on - strand, within B158DRAFT_0683at 684.937 kb on + strand, within B158DRAFT_0683at 684.964 kb on - strand, within B158DRAFT_0683at 684.980 kb on - strand, within B158DRAFT_0683at 684.980 kb on - strand, within B158DRAFT_0683at 685.011 kb on + strand, within B158DRAFT_0683at 685.245 kb on - strand, within B158DRAFT_0683at 685.255 kb on + strand, within B158DRAFT_0683at 685.275 kb on + strand, within B158DRAFT_0683at 685.283 kb on - strand, within B158DRAFT_0683at 685.283 kb on - strand, within B158DRAFT_0683at 685.302 kb on + strand, within B158DRAFT_0683at 685.317 kb on - strand, within B158DRAFT_0683at 685.333 kb on + strandat 685.341 kb on - strandat 685.341 kb on - strandat 685.356 kb on - strandat 685.374 kb on - strandat 685.411 kb on + strandat 685.416 kb on + strandat 685.424 kb on - strandat 685.462 kb on + strandat 685.475 kb on + strandat 685.500 kb on + strandat 685.508 kb on - strandat 685.522 kb on + strandat 685.522 kb on + strandat 685.537 kb on - strandat 685.537 kb on - strandat 685.599 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.649 kb on - strandat 685.654 kb on - strandat 685.657 kb on + strandat 685.665 kb on - strandat 685.665 kb on - strandat 685.841 kb on - strandat 685.856 kb on + strand, within B158DRAFT_0684at 685.905 kb on + strand, within B158DRAFT_0684at 686.042 kb on + strand, within B158DRAFT_0684at 686.061 kb on + strand, within B158DRAFT_0684at 686.073 kb on + strand, within B158DRAFT_0684at 686.089 kb on + strand, within B158DRAFT_0684at 686.097 kb on - strand, within B158DRAFT_0684at 686.133 kb on - strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.157 kb on - strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.197 kb on - strand, within B158DRAFT_0684at 686.213 kb on - strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.312 kb on - strand, within B158DRAFT_0684at 686.361 kb on + strand, within B158DRAFT_0684at 686.369 kb on - strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.400 kb on - strand, within B158DRAFT_0684at 686.413 kb on + strand, within B158DRAFT_0684at 686.452 kb on + strandat 686.452 kb on + strandat 686.461 kb on - strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.499 kb on + strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.510 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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682,303 + B158DRAFT_0681 0.15 +0.7
682,335 + B158DRAFT_0681 0.26 +0.9
682,343 - B158DRAFT_0681 0.29 +0.7
682,357 + B158DRAFT_0681 0.34 -0.8
682,357 + B158DRAFT_0681 0.34 +0.7
682,372 - B158DRAFT_0681 0.39 +0.4
682,452 - B158DRAFT_0681 0.66 +0.7
682,570 - +0.8
682,575 + +1.5
682,611 - +0.5
682,611 - +0.2
682,611 - +0.3
682,611 - +0.2
682,611 - -0.4
682,621 - +1.0
682,626 + +0.4
682,634 - B158DRAFT_0682 0.11 -0.5
682,727 - B158DRAFT_0682 0.29 -2.0
682,770 + B158DRAFT_0682 0.37 +0.3
682,783 + B158DRAFT_0682 0.40 +0.3
682,783 + B158DRAFT_0682 0.40 -0.5
682,786 - B158DRAFT_0682 0.41 -2.0
682,788 + B158DRAFT_0682 0.41 -0.6
682,999 - B158DRAFT_0682 0.82 -0.4
683,131 + -1.0
683,147 - +0.1
683,173 - +0.3
683,201 + -0.0
683,246 + -1.7
683,286 + +0.5
683,342 + +0.6
683,342 + +0.3
683,376 - +0.1
683,397 + -0.2
683,397 + +0.4
683,397 + +0.3
683,397 + +0.3
683,397 + +1.1
683,397 + +0.2
683,465 + +0.4
683,579 + B158DRAFT_0683 0.15 +0.2
683,579 + B158DRAFT_0683 0.15 +0.1
683,597 - B158DRAFT_0683 0.15 +0.5
683,607 + B158DRAFT_0683 0.16 -0.0
683,618 + B158DRAFT_0683 0.16 +1.6
683,682 + B158DRAFT_0683 0.19 +0.3
683,684 - B158DRAFT_0683 0.19 +0.5
683,690 - B158DRAFT_0683 0.19 +0.9
683,690 - B158DRAFT_0683 0.19 +0.3
683,724 + B158DRAFT_0683 0.21 -0.2
683,761 + B158DRAFT_0683 0.22 +0.4
683,783 - B158DRAFT_0683 0.23 +0.1
683,806 + B158DRAFT_0683 0.24 +0.5
683,806 + B158DRAFT_0683 0.24 +0.6
683,806 + B158DRAFT_0683 0.24 +0.5
683,806 + B158DRAFT_0683 0.24 +0.1
683,806 + B158DRAFT_0683 0.24 +0.5
683,814 - B158DRAFT_0683 0.25 +0.6
683,814 - B158DRAFT_0683 0.25 -0.0
683,814 - B158DRAFT_0683 0.25 +0.4
683,844 + B158DRAFT_0683 0.26 +1.4
683,857 + B158DRAFT_0683 0.27 +0.6
683,857 + B158DRAFT_0683 0.27 +1.0
683,857 + B158DRAFT_0683 0.27 +0.7
683,857 + B158DRAFT_0683 0.27 +0.7
683,862 + B158DRAFT_0683 0.27 +0.5
683,865 - B158DRAFT_0683 0.27 -0.0
683,865 - B158DRAFT_0683 0.27 +0.7
683,865 - B158DRAFT_0683 0.27 +0.1
683,867 + B158DRAFT_0683 0.27 +0.4
683,867 + B158DRAFT_0683 0.27 +0.3
683,867 + B158DRAFT_0683 0.27 -0.1
683,875 - B158DRAFT_0683 0.27 +0.9
683,875 - B158DRAFT_0683 0.27 +0.1
683,931 + B158DRAFT_0683 0.30 +0.8
683,951 - B158DRAFT_0683 0.31 +0.5
683,951 - B158DRAFT_0683 0.31 +0.5
683,964 - B158DRAFT_0683 0.31 +0.9
684,002 + B158DRAFT_0683 0.33 -0.1
684,007 + B158DRAFT_0683 0.33 -0.0
684,010 - B158DRAFT_0683 0.33 +0.2
684,010 - B158DRAFT_0683 0.33 +0.3
684,010 - B158DRAFT_0683 0.33 +0.5
684,015 + B158DRAFT_0683 0.33 +0.5
684,023 - B158DRAFT_0683 0.34 -0.5
684,033 - B158DRAFT_0683 0.34 +0.8
684,033 - B158DRAFT_0683 0.34 +0.3
684,038 + B158DRAFT_0683 0.34 +0.4
684,090 - B158DRAFT_0683 0.37 +1.1
684,090 - B158DRAFT_0683 0.37 +0.6
684,092 + B158DRAFT_0683 0.37 +0.3
684,092 + B158DRAFT_0683 0.37 +0.4
684,092 + B158DRAFT_0683 0.37 +0.5
684,092 + B158DRAFT_0683 0.37 +0.2
684,092 + B158DRAFT_0683 0.37 +0.7
684,092 + B158DRAFT_0683 0.37 +0.4
684,092 + B158DRAFT_0683 0.37 +0.3
684,092 + B158DRAFT_0683 0.37 +0.8
684,092 + B158DRAFT_0683 0.37 +0.1
684,092 + B158DRAFT_0683 0.37 -0.0
684,100 - B158DRAFT_0683 0.37 +0.3
684,100 - B158DRAFT_0683 0.37 +0.2
684,100 - B158DRAFT_0683 0.37 -0.4
684,100 - B158DRAFT_0683 0.37 -0.1
684,100 - B158DRAFT_0683 0.37 +0.4
684,127 + B158DRAFT_0683 0.38 +0.8
684,141 - B158DRAFT_0683 0.39 +0.4
684,148 + B158DRAFT_0683 0.39 +0.5
684,148 + B158DRAFT_0683 0.39 +0.6
684,149 + B158DRAFT_0683 0.39 +0.3
684,263 + B158DRAFT_0683 0.44 -0.1
684,263 + B158DRAFT_0683 0.44 +0.5
684,271 - B158DRAFT_0683 0.44 +0.3
684,271 - B158DRAFT_0683 0.44 +0.7
684,271 - B158DRAFT_0683 0.44 -0.1
684,363 + B158DRAFT_0683 0.48 -0.2
684,382 + B158DRAFT_0683 0.49 +0.4
684,405 + B158DRAFT_0683 0.50 -0.2
684,410 + B158DRAFT_0683 0.50 +0.6
684,415 + B158DRAFT_0683 0.51 +0.5
684,415 + B158DRAFT_0683 0.51 +0.2
684,415 + B158DRAFT_0683 0.51 +0.5
684,420 + B158DRAFT_0683 0.51 +0.3
684,423 - B158DRAFT_0683 0.51 -0.1
684,423 - B158DRAFT_0683 0.51 +0.2
684,458 + B158DRAFT_0683 0.52 +0.5
684,466 - B158DRAFT_0683 0.53 +0.7
684,615 + B158DRAFT_0683 0.59 +0.2
684,746 + B158DRAFT_0683 0.65 +0.5
684,823 - B158DRAFT_0683 0.68 -2.5
684,824 - B158DRAFT_0683 0.68 -0.1
684,926 - B158DRAFT_0683 0.73 +0.7
684,927 + B158DRAFT_0683 0.73 -0.3
684,935 - B158DRAFT_0683 0.73 +0.6
684,937 + B158DRAFT_0683 0.73 +0.5
684,964 - B158DRAFT_0683 0.74 +0.7
684,980 - B158DRAFT_0683 0.75 +0.4
684,980 - B158DRAFT_0683 0.75 +0.7
685,011 + B158DRAFT_0683 0.76 +0.6
685,245 - B158DRAFT_0683 0.86 +0.6
685,255 + B158DRAFT_0683 0.87 +0.4
685,275 + B158DRAFT_0683 0.88 +0.3
685,283 - B158DRAFT_0683 0.88 +0.7
685,283 - B158DRAFT_0683 0.88 +0.2
685,302 + B158DRAFT_0683 0.89 +0.4
685,317 - B158DRAFT_0683 0.89 +0.7
685,333 + +0.6
685,341 - +1.0
685,341 - +0.1
685,356 - +0.4
685,374 - +0.3
685,411 + +0.4
685,416 + +0.1
685,424 - +0.5
685,462 + +0.4
685,475 + +0.7
685,500 + +0.1
685,508 - +1.0
685,522 + +0.1
685,522 + +0.6
685,537 - +0.0
685,537 - +0.5
685,599 + +0.6
685,646 + -0.7
685,646 + -0.5
685,646 + -0.7
685,646 + -0.7
685,646 + -0.2
685,649 - -2.8
685,654 - -2.9
685,657 + +0.6
685,665 - -2.5
685,665 - -3.4
685,841 - -1.6
685,856 + B158DRAFT_0684 0.11 -3.0
685,905 + B158DRAFT_0684 0.18 -4.7
686,042 + B158DRAFT_0684 0.37 -3.2
686,061 + B158DRAFT_0684 0.39 -2.9
686,073 + B158DRAFT_0684 0.41 -2.7
686,089 + B158DRAFT_0684 0.43 -4.7
686,097 - B158DRAFT_0684 0.44 -3.9
686,133 - B158DRAFT_0684 0.49 -4.3
686,135 + B158DRAFT_0684 0.49 -4.1
686,135 + B158DRAFT_0684 0.49 -2.1
686,157 - B158DRAFT_0684 0.52 -3.2
686,189 + B158DRAFT_0684 0.57 -3.8
686,189 + B158DRAFT_0684 0.57 -4.9
686,197 - B158DRAFT_0684 0.58 -3.5
686,213 - B158DRAFT_0684 0.60 -4.4
686,284 + B158DRAFT_0684 0.70 -3.3
686,284 + B158DRAFT_0684 0.70 -2.3
686,284 + B158DRAFT_0684 0.70 -3.5
686,284 + B158DRAFT_0684 0.70 -3.5
686,284 + B158DRAFT_0684 0.70 -2.7
686,284 + B158DRAFT_0684 0.70 -5.3
686,284 + B158DRAFT_0684 0.70 -5.5
686,284 + B158DRAFT_0684 0.70 -2.8
686,292 - B158DRAFT_0684 0.71 -1.8
686,292 - B158DRAFT_0684 0.71 -4.2
686,292 - B158DRAFT_0684 0.71 -3.5
686,292 - B158DRAFT_0684 0.71 -2.0
686,292 - B158DRAFT_0684 0.71 -3.5
686,292 - B158DRAFT_0684 0.71 -4.8
686,312 - B158DRAFT_0684 0.74 -3.9
686,361 + B158DRAFT_0684 0.81 -3.5
686,369 - B158DRAFT_0684 0.82 -3.6
686,379 + B158DRAFT_0684 0.83 -3.4
686,379 + B158DRAFT_0684 0.83 -2.8
686,379 + B158DRAFT_0684 0.83 -3.6
686,400 - B158DRAFT_0684 0.86 -3.7
686,413 + B158DRAFT_0684 0.88 -3.5
686,452 + -4.5
686,452 + -2.1
686,461 - -0.6
686,494 + -0.1
686,494 + -0.1
686,494 + -0.3
686,494 + -0.2
686,499 + -0.1
686,502 - -1.8
686,502 - -1.6
686,502 - -1.8
686,510 - -1.4

Or see this region's nucleotide sequence