Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0074

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0072 and B158DRAFT_0073 are separated by 33 nucleotidesB158DRAFT_0073 and B158DRAFT_0074 are separated by 133 nucleotidesB158DRAFT_0074 and B158DRAFT_0075 are separated by 210 nucleotides B158DRAFT_0072: B158DRAFT_0072 - Peptidase family M48., at 68,559 to 69,359 _0072 B158DRAFT_0073: B158DRAFT_0073 - Glutathione S-transferase, at 69,393 to 70,055 _0073 B158DRAFT_0074: B158DRAFT_0074 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 70,189 to 70,671 _0074 B158DRAFT_0075: B158DRAFT_0075 - lipoate synthase, at 70,882 to 71,907 _0075 Position (kb) 70 71Strain fitness (log2 ratio) -1 0 1at 69.192 kb on - strand, within B158DRAFT_0072at 69.255 kb on + strand, within B158DRAFT_0072at 69.259 kb on - strand, within B158DRAFT_0072at 69.263 kb on - strand, within B158DRAFT_0072at 69.263 kb on - strand, within B158DRAFT_0072at 69.320 kb on + strandat 69.349 kb on - strandat 69.537 kb on + strand, within B158DRAFT_0073at 69.766 kb on - strand, within B158DRAFT_0073at 69.865 kb on + strand, within B158DRAFT_0073at 70.024 kb on - strandat 70.024 kb on - strandat 70.048 kb on - strandat 70.115 kb on + strandat 70.195 kb on + strandat 70.195 kb on + strandat 70.339 kb on - strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.371 kb on - strand, within B158DRAFT_0074at 70.371 kb on - strand, within B158DRAFT_0074at 70.379 kb on + strand, within B158DRAFT_0074at 70.387 kb on - strand, within B158DRAFT_0074at 70.649 kb on + strandat 70.649 kb on + strandat 70.657 kb on - strandat 70.667 kb on - strandat 70.858 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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69,192 - B158DRAFT_0072 0.79 +1.0
69,255 + B158DRAFT_0072 0.87 -0.4
69,259 - B158DRAFT_0072 0.87 -0.9
69,263 - B158DRAFT_0072 0.88 +0.4
69,263 - B158DRAFT_0072 0.88 +0.1
69,320 + +0.9
69,349 - +0.2
69,537 + B158DRAFT_0073 0.22 -0.7
69,766 - B158DRAFT_0073 0.56 -0.7
69,865 + B158DRAFT_0073 0.71 -1.1
70,024 - -0.7
70,024 - -0.9
70,048 - -0.5
70,115 + -0.1
70,195 + -0.5
70,195 + -0.3
70,339 - B158DRAFT_0074 0.31 -0.3
70,356 + B158DRAFT_0074 0.35 -0.3
70,356 + B158DRAFT_0074 0.35 -0.0
70,356 + B158DRAFT_0074 0.35 -0.2
70,356 + B158DRAFT_0074 0.35 +0.3
70,356 + B158DRAFT_0074 0.35 -0.1
70,356 + B158DRAFT_0074 0.35 -0.4
70,364 - B158DRAFT_0074 0.36 +0.1
70,364 - B158DRAFT_0074 0.36 -0.0
70,364 - B158DRAFT_0074 0.36 -0.5
70,364 - B158DRAFT_0074 0.36 -0.4
70,364 - B158DRAFT_0074 0.36 -0.1
70,364 - B158DRAFT_0074 0.36 -0.8
70,371 - B158DRAFT_0074 0.38 -0.5
70,371 - B158DRAFT_0074 0.38 +0.4
70,379 + B158DRAFT_0074 0.39 -1.1
70,387 - B158DRAFT_0074 0.41 -0.3
70,649 + -0.5
70,649 + +0.4
70,657 - +0.2
70,667 - -0.3
70,858 + -0.2

Or see this region's nucleotide sequence