Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2246

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2245 and B158DRAFT_2246 are separated by 62 nucleotidesB158DRAFT_2246 and B158DRAFT_2247 are separated by 142 nucleotidesB158DRAFT_2247 and B158DRAFT_2248 are separated by 133 nucleotides B158DRAFT_2245: B158DRAFT_2245 - Predicted membrane protein, at 409,032 to 409,640 _2245 B158DRAFT_2246: B158DRAFT_2246 - hypothetical protein, at 409,703 to 410,605 _2246 B158DRAFT_2247: B158DRAFT_2247 - hypothetical protein, at 410,748 to 411,104 _2247 B158DRAFT_2248: B158DRAFT_2248 - hypothetical protein, at 411,238 to 411,600 _2248 Position (kb) 409 410 411Strain fitness (log2 ratio) -1 0 1at 408.804 kb on + strandat 408.804 kb on + strandat 408.817 kb on - strandat 408.831 kb on + strandat 408.918 kb on - strandat 408.946 kb on - strandat 408.946 kb on - strandat 408.961 kb on - strandat 409.200 kb on - strand, within B158DRAFT_2245at 409.240 kb on + strand, within B158DRAFT_2245at 409.241 kb on - strand, within B158DRAFT_2245at 409.260 kb on + strand, within B158DRAFT_2245at 409.428 kb on + strand, within B158DRAFT_2245at 409.479 kb on - strand, within B158DRAFT_2245at 409.511 kb on + strand, within B158DRAFT_2245at 409.539 kb on + strand, within B158DRAFT_2245at 409.674 kb on + strandat 409.674 kb on + strandat 409.709 kb on - strandat 409.732 kb on - strandat 409.771 kb on + strandat 409.779 kb on - strandat 409.779 kb on - strandat 409.905 kb on - strand, within B158DRAFT_2246at 409.917 kb on - strand, within B158DRAFT_2246at 409.917 kb on - strand, within B158DRAFT_2246at 410.025 kb on + strand, within B158DRAFT_2246at 410.107 kb on - strand, within B158DRAFT_2246at 410.203 kb on + strand, within B158DRAFT_2246at 410.208 kb on + strand, within B158DRAFT_2246at 410.234 kb on - strand, within B158DRAFT_2246at 410.358 kb on - strand, within B158DRAFT_2246at 410.542 kb on + strandat 410.542 kb on + strandat 410.542 kb on + strandat 410.542 kb on + strandat 410.542 kb on + strandat 410.550 kb on - strandat 410.550 kb on - strandat 410.550 kb on - strandat 410.552 kb on + strandat 410.556 kb on + strandat 410.556 kb on + strandat 410.556 kb on + strandat 410.556 kb on + strandat 410.556 kb on + strandat 410.829 kb on + strand, within B158DRAFT_2247at 411.037 kb on + strand, within B158DRAFT_2247at 411.227 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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408,804 + -1.0
408,804 + +0.3
408,817 - -0.5
408,831 + -0.6
408,918 - +0.2
408,946 - +0.2
408,946 - +0.0
408,961 - +0.7
409,200 - B158DRAFT_2245 0.28 -0.4
409,240 + B158DRAFT_2245 0.34 +0.2
409,241 - B158DRAFT_2245 0.34 -0.0
409,260 + B158DRAFT_2245 0.37 +0.1
409,428 + B158DRAFT_2245 0.65 +0.1
409,479 - B158DRAFT_2245 0.73 +0.0
409,511 + B158DRAFT_2245 0.79 +0.6
409,539 + B158DRAFT_2245 0.83 -0.4
409,674 + -0.1
409,674 + -0.6
409,709 - +1.1
409,732 - -1.2
409,771 + +0.1
409,779 - +0.3
409,779 - +0.1
409,905 - B158DRAFT_2246 0.22 +0.1
409,917 - B158DRAFT_2246 0.24 -0.2
409,917 - B158DRAFT_2246 0.24 -0.1
410,025 + B158DRAFT_2246 0.36 -0.2
410,107 - B158DRAFT_2246 0.45 -0.2
410,203 + B158DRAFT_2246 0.55 -0.9
410,208 + B158DRAFT_2246 0.56 +0.4
410,234 - B158DRAFT_2246 0.59 +0.3
410,358 - B158DRAFT_2246 0.73 -1.4
410,542 + +0.2
410,542 + +1.6
410,542 + +0.4
410,542 + -0.6
410,542 + -0.0
410,550 - -0.4
410,550 - -0.6
410,550 - -0.4
410,552 + +1.0
410,556 + -0.0
410,556 + -0.2
410,556 + -0.2
410,556 + +0.2
410,556 + -0.4
410,829 + B158DRAFT_2247 0.23 -1.3
411,037 + B158DRAFT_2247 0.81 +0.1
411,227 - -0.1

Or see this region's nucleotide sequence