Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2231

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2229 and B158DRAFT_2230 are separated by 98 nucleotidesB158DRAFT_2230 and B158DRAFT_2231 are separated by 133 nucleotidesB158DRAFT_2231 and B158DRAFT_2232 are separated by 272 nucleotidesB158DRAFT_2232 and B158DRAFT_2233 are separated by 28 nucleotides B158DRAFT_2229: B158DRAFT_2229 - 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52), at 381,471 to 383,627 _2229 B158DRAFT_2230: B158DRAFT_2230 - hypothetical protein, at 383,726 to 384,424 _2230 B158DRAFT_2231: B158DRAFT_2231 - Glutaredoxin-like domain (DUF836)., at 384,558 to 384,824 _2231 B158DRAFT_2232: B158DRAFT_2232 - transcriptional regulator, TetR family, at 385,097 to 385,726 _2232 B158DRAFT_2233: B158DRAFT_2233 - Acyl-CoA dehydrogenases, at 385,755 to 388,226 _2233 Position (kb) 384 385Strain fitness (log2 ratio) -1 0 1at 383.605 kb on + strandat 383.613 kb on - strandat 383.652 kb on + strandat 383.907 kb on + strand, within B158DRAFT_2230at 384.178 kb on - strand, within B158DRAFT_2230at 384.201 kb on + strand, within B158DRAFT_2230at 384.201 kb on + strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.768 kb on + strand, within B158DRAFT_2231at 384.878 kb on - strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.929 kb on - strandat 384.981 kb on + strandat 384.981 kb on + strandat 385.005 kb on - strandat 385.092 kb on - strandat 385.092 kb on - strandat 385.099 kb on + strandat 385.107 kb on - strandat 385.130 kb on - strandat 385.196 kb on + strand, within B158DRAFT_2232at 385.214 kb on - strand, within B158DRAFT_2232at 385.219 kb on - strand, within B158DRAFT_2232at 385.263 kb on - strand, within B158DRAFT_2232at 385.273 kb on - strand, within B158DRAFT_2232at 385.298 kb on + strand, within B158DRAFT_2232at 385.305 kb on + strand, within B158DRAFT_2232at 385.313 kb on - strand, within B158DRAFT_2232at 385.313 kb on - strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.328 kb on - strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.338 kb on - strand, within B158DRAFT_2232at 385.338 kb on - strand, within B158DRAFT_2232at 385.340 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.447 kb on + strand, within B158DRAFT_2232at 385.508 kb on - strand, within B158DRAFT_2232at 385.542 kb on + strand, within B158DRAFT_2232at 385.616 kb on - strand, within B158DRAFT_2232

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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383,605 + -0.4
383,613 - -0.1
383,652 + -0.4
383,907 + B158DRAFT_2230 0.26 -0.4
384,178 - B158DRAFT_2230 0.65 -1.1
384,201 + B158DRAFT_2230 0.68 -0.2
384,201 + B158DRAFT_2230 0.68 -0.3
384,209 - B158DRAFT_2230 0.69 -0.5
384,209 - B158DRAFT_2230 0.69 -0.8
384,209 - B158DRAFT_2230 0.69 -0.6
384,768 + B158DRAFT_2231 0.79 +0.3
384,878 - +0.0
384,914 + +0.3
384,914 + -0.0
384,914 + +0.3
384,914 + -0.7
384,914 + -0.1
384,914 + -0.2
384,914 + -0.5
384,914 + -0.0
384,914 + +0.2
384,914 + -0.7
384,914 + +0.1
384,914 + +0.4
384,914 + +0.1
384,914 + -0.3
384,914 + +0.9
384,914 + +0.3
384,914 + -0.4
384,914 + -0.4
384,914 + -0.1
384,914 + +0.1
384,914 + +0.2
384,914 + -0.0
384,914 + -0.2
384,914 + -0.1
384,914 + -0.2
384,914 + -0.3
384,914 + +0.7
384,922 - +0.2
384,922 - -0.6
384,922 - -0.1
384,922 - -0.2
384,922 - -0.3
384,922 - +0.3
384,922 - +0.1
384,922 - +0.4
384,922 - +0.0
384,922 - -0.6
384,922 - +0.4
384,922 - -1.4
384,922 - +0.1
384,922 - -0.5
384,922 - -0.4
384,922 - +0.2
384,922 - -0.1
384,922 - -0.7
384,922 - -0.7
384,929 - -0.1
384,981 + +0.0
384,981 + -0.4
385,005 - -1.6
385,092 - +0.5
385,092 - +0.2
385,099 + +0.4
385,107 - -0.4
385,130 - +0.6
385,196 + B158DRAFT_2232 0.16 +0.2
385,214 - B158DRAFT_2232 0.19 -0.6
385,219 - B158DRAFT_2232 0.19 +1.0
385,263 - B158DRAFT_2232 0.26 -0.1
385,273 - B158DRAFT_2232 0.28 +0.9
385,298 + B158DRAFT_2232 0.32 +0.9
385,305 + B158DRAFT_2232 0.33 -0.4
385,313 - B158DRAFT_2232 0.34 +0.2
385,313 - B158DRAFT_2232 0.34 -0.4
385,320 + B158DRAFT_2232 0.35 +0.9
385,320 + B158DRAFT_2232 0.35 -0.3
385,320 + B158DRAFT_2232 0.35 -0.2
385,328 - B158DRAFT_2232 0.37 -0.5
385,330 + B158DRAFT_2232 0.37 +0.1
385,330 + B158DRAFT_2232 0.37 +0.4
385,330 + B158DRAFT_2232 0.37 +0.7
385,338 - B158DRAFT_2232 0.38 -0.1
385,338 - B158DRAFT_2232 0.38 -0.1
385,340 + B158DRAFT_2232 0.39 +1.1
385,375 + B158DRAFT_2232 0.44 +0.2
385,375 + B158DRAFT_2232 0.44 -0.5
385,375 + B158DRAFT_2232 0.44 +0.3
385,375 + B158DRAFT_2232 0.44 +0.3
385,375 + B158DRAFT_2232 0.44 -0.2
385,375 + B158DRAFT_2232 0.44 +0.2
385,375 + B158DRAFT_2232 0.44 +0.0
385,375 + B158DRAFT_2232 0.44 -0.5
385,375 + B158DRAFT_2232 0.44 +0.2
385,375 + B158DRAFT_2232 0.44 +0.2
385,383 - B158DRAFT_2232 0.45 +0.4
385,383 - B158DRAFT_2232 0.45 -0.2
385,383 - B158DRAFT_2232 0.45 +0.1
385,383 - B158DRAFT_2232 0.45 -0.6
385,383 - B158DRAFT_2232 0.45 +0.3
385,383 - B158DRAFT_2232 0.45 +0.2
385,383 - B158DRAFT_2232 0.45 +0.4
385,383 - B158DRAFT_2232 0.45 -0.2
385,383 - B158DRAFT_2232 0.45 -0.2
385,383 - B158DRAFT_2232 0.45 +0.3
385,447 + B158DRAFT_2232 0.56 -0.0
385,508 - B158DRAFT_2232 0.65 +0.4
385,542 + B158DRAFT_2232 0.71 -0.4
385,616 - B158DRAFT_2232 0.82 +0.6

Or see this region's nucleotide sequence