Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2218

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2217 and B158DRAFT_2218 are separated by 60 nucleotidesB158DRAFT_2218 and B158DRAFT_2219 overlap by 1 nucleotides B158DRAFT_2217: B158DRAFT_2217 - TonB family C-terminal domain, at 364,480 to 366,510 _2217 B158DRAFT_2218: B158DRAFT_2218 - succinylarginine dihydrolase (EC 3.5.3.23), at 366,571 to 367,941 _2218 B158DRAFT_2219: B158DRAFT_2219 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 367,941 to 369,416 _2219 Position (kb) 366 367 368Strain fitness (log2 ratio) -3 -2 -1 0 1at 365.595 kb on + strand, within B158DRAFT_2217at 365.605 kb on + strand, within B158DRAFT_2217at 365.685 kb on - strand, within B158DRAFT_2217at 365.685 kb on - strand, within B158DRAFT_2217at 365.814 kb on + strand, within B158DRAFT_2217at 365.814 kb on + strand, within B158DRAFT_2217at 365.892 kb on - strand, within B158DRAFT_2217at 365.994 kb on - strand, within B158DRAFT_2217at 366.032 kb on - strand, within B158DRAFT_2217at 366.035 kb on + strand, within B158DRAFT_2217at 366.040 kb on + strand, within B158DRAFT_2217at 366.199 kb on - strand, within B158DRAFT_2217at 366.227 kb on + strand, within B158DRAFT_2217at 366.248 kb on - strand, within B158DRAFT_2217at 366.294 kb on + strand, within B158DRAFT_2217at 366.329 kb on + strandat 366.372 kb on - strandat 366.372 kb on - strandat 366.459 kb on + strandat 366.459 kb on + strandat 366.654 kb on + strandat 366.769 kb on + strand, within B158DRAFT_2218at 366.869 kb on + strand, within B158DRAFT_2218at 366.869 kb on + strand, within B158DRAFT_2218at 366.874 kb on + strand, within B158DRAFT_2218at 366.895 kb on - strand, within B158DRAFT_2218at 366.923 kb on - strand, within B158DRAFT_2218at 366.990 kb on + strand, within B158DRAFT_2218at 366.998 kb on - strand, within B158DRAFT_2218at 367.003 kb on - strand, within B158DRAFT_2218at 367.077 kb on + strand, within B158DRAFT_2218at 367.077 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.185 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.230 kb on - strand, within B158DRAFT_2218at 367.290 kb on + strand, within B158DRAFT_2218at 367.303 kb on - strand, within B158DRAFT_2218at 367.424 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.432 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.441 kb on + strand, within B158DRAFT_2218at 367.446 kb on + strand, within B158DRAFT_2218at 367.594 kb on + strand, within B158DRAFT_2218at 367.602 kb on - strand, within B158DRAFT_2218at 367.602 kb on - strand, within B158DRAFT_2218at 367.705 kb on + strand, within B158DRAFT_2218at 367.739 kb on - strand, within B158DRAFT_2218at 367.760 kb on - strand, within B158DRAFT_2218at 367.760 kb on - strand, within B158DRAFT_2218at 367.766 kb on - strand, within B158DRAFT_2218at 367.775 kb on + strand, within B158DRAFT_2218at 367.876 kb on + strandat 367.884 kb on - strandat 367.939 kb on + strandat 367.939 kb on + strandat 367.955 kb on - strandat 368.071 kb on + strandat 368.262 kb on - strand, within B158DRAFT_2219at 368.294 kb on - strand, within B158DRAFT_2219at 368.310 kb on + strand, within B158DRAFT_2219at 368.318 kb on - strand, within B158DRAFT_2219at 368.320 kb on + strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.341 kb on + strand, within B158DRAFT_2219at 368.349 kb on - strand, within B158DRAFT_2219at 368.377 kb on + strand, within B158DRAFT_2219at 368.377 kb on + strand, within B158DRAFT_2219at 368.385 kb on - strand, within B158DRAFT_2219at 368.390 kb on - strand, within B158DRAFT_2219at 368.399 kb on - strand, within B158DRAFT_2219at 368.414 kb on - strand, within B158DRAFT_2219at 368.414 kb on - strand, within B158DRAFT_2219at 368.435 kb on + strand, within B158DRAFT_2219at 368.435 kb on + strand, within B158DRAFT_2219at 368.443 kb on - strand, within B158DRAFT_2219at 368.443 kb on - strand, within B158DRAFT_2219at 368.566 kb on + strand, within B158DRAFT_2219at 368.566 kb on + strand, within B158DRAFT_2219at 368.571 kb on + strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.586 kb on + strand, within B158DRAFT_2219at 368.648 kb on - strand, within B158DRAFT_2219at 368.676 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.767 kb on + strand, within B158DRAFT_2219at 368.769 kb on - strand, within B158DRAFT_2219at 368.807 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.832 kb on - strand, within B158DRAFT_2219at 368.844 kb on - strand, within B158DRAFT_2219at 368.886 kb on - strand, within B158DRAFT_2219

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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365,595 + B158DRAFT_2217 0.55 +0.3
365,605 + B158DRAFT_2217 0.55 -0.2
365,685 - B158DRAFT_2217 0.59 +1.6
365,685 - B158DRAFT_2217 0.59 +0.5
365,814 + B158DRAFT_2217 0.66 +0.9
365,814 + B158DRAFT_2217 0.66 -0.4
365,892 - B158DRAFT_2217 0.70 -0.3
365,994 - B158DRAFT_2217 0.75 -0.2
366,032 - B158DRAFT_2217 0.76 +0.1
366,035 + B158DRAFT_2217 0.77 -0.4
366,040 + B158DRAFT_2217 0.77 +0.4
366,199 - B158DRAFT_2217 0.85 -0.0
366,227 + B158DRAFT_2217 0.86 +0.1
366,248 - B158DRAFT_2217 0.87 -0.4
366,294 + B158DRAFT_2217 0.89 +0.2
366,329 + +1.2
366,372 - +0.2
366,372 - -0.6
366,459 + +0.1
366,459 + -1.9
366,654 + -1.6
366,769 + B158DRAFT_2218 0.14 -3.1
366,869 + B158DRAFT_2218 0.22 -3.1
366,869 + B158DRAFT_2218 0.22 -2.1
366,874 + B158DRAFT_2218 0.22 -0.7
366,895 - B158DRAFT_2218 0.24 -0.1
366,923 - B158DRAFT_2218 0.26 -2.0
366,990 + B158DRAFT_2218 0.31 -1.6
366,998 - B158DRAFT_2218 0.31 -1.6
367,003 - B158DRAFT_2218 0.32 -0.3
367,077 + B158DRAFT_2218 0.37 -1.7
367,077 + B158DRAFT_2218 0.37 -2.5
367,082 + B158DRAFT_2218 0.37 -1.6
367,082 + B158DRAFT_2218 0.37 -1.4
367,082 + B158DRAFT_2218 0.37 -1.9
367,082 + B158DRAFT_2218 0.37 -0.4
367,082 + B158DRAFT_2218 0.37 -2.1
367,090 - B158DRAFT_2218 0.38 -0.7
367,090 - B158DRAFT_2218 0.38 -1.6
367,090 - B158DRAFT_2218 0.38 -1.6
367,090 - B158DRAFT_2218 0.38 -2.5
367,090 - B158DRAFT_2218 0.38 -1.6
367,090 - B158DRAFT_2218 0.38 -1.5
367,090 - B158DRAFT_2218 0.38 -2.1
367,090 - B158DRAFT_2218 0.38 +0.4
367,090 - B158DRAFT_2218 0.38 -2.5
367,185 + B158DRAFT_2218 0.45 -0.9
367,212 + B158DRAFT_2218 0.47 -1.1
367,212 + B158DRAFT_2218 0.47 -1.1
367,212 + B158DRAFT_2218 0.47 -3.1
367,230 - B158DRAFT_2218 0.48 -0.1
367,290 + B158DRAFT_2218 0.52 -1.4
367,303 - B158DRAFT_2218 0.53 -1.9
367,424 + B158DRAFT_2218 0.62 -1.7
367,429 + B158DRAFT_2218 0.63 -1.1
367,429 + B158DRAFT_2218 0.63 -0.8
367,429 + B158DRAFT_2218 0.63 -2.8
367,432 - B158DRAFT_2218 0.63 -0.3
367,437 - B158DRAFT_2218 0.63 -0.7
367,437 - B158DRAFT_2218 0.63 -2.7
367,437 - B158DRAFT_2218 0.63 -2.6
367,437 - B158DRAFT_2218 0.63 -0.9
367,437 - B158DRAFT_2218 0.63 -1.7
367,437 - B158DRAFT_2218 0.63 -0.4
367,437 - B158DRAFT_2218 0.63 -2.1
367,441 + B158DRAFT_2218 0.63 -2.5
367,446 + B158DRAFT_2218 0.64 -2.0
367,594 + B158DRAFT_2218 0.75 -2.5
367,602 - B158DRAFT_2218 0.75 -0.6
367,602 - B158DRAFT_2218 0.75 -1.0
367,705 + B158DRAFT_2218 0.83 -2.1
367,739 - B158DRAFT_2218 0.85 -0.3
367,760 - B158DRAFT_2218 0.87 -2.0
367,760 - B158DRAFT_2218 0.87 -1.9
367,766 - B158DRAFT_2218 0.87 -1.4
367,775 + B158DRAFT_2218 0.88 -0.7
367,876 + -2.6
367,884 - -1.6
367,939 + -0.6
367,939 + -1.9
367,955 - -0.5
368,071 + -0.6
368,262 - B158DRAFT_2219 0.22 -1.3
368,294 - B158DRAFT_2219 0.24 -1.0
368,310 + B158DRAFT_2219 0.25 -0.9
368,318 - B158DRAFT_2219 0.26 -1.2
368,320 + B158DRAFT_2219 0.26 -0.3
368,323 - B158DRAFT_2219 0.26 -1.0
368,323 - B158DRAFT_2219 0.26 -1.8
368,323 - B158DRAFT_2219 0.26 +0.6
368,323 - B158DRAFT_2219 0.26 -0.9
368,341 + B158DRAFT_2219 0.27 -1.9
368,349 - B158DRAFT_2219 0.28 -0.8
368,377 + B158DRAFT_2219 0.30 -2.4
368,377 + B158DRAFT_2219 0.30 -1.4
368,385 - B158DRAFT_2219 0.30 -1.4
368,390 - B158DRAFT_2219 0.30 -0.8
368,399 - B158DRAFT_2219 0.31 -1.4
368,414 - B158DRAFT_2219 0.32 +0.0
368,414 - B158DRAFT_2219 0.32 -0.1
368,435 + B158DRAFT_2219 0.33 -2.9
368,435 + B158DRAFT_2219 0.33 -0.6
368,443 - B158DRAFT_2219 0.34 -1.8
368,443 - B158DRAFT_2219 0.34 -1.2
368,566 + B158DRAFT_2219 0.42 -2.6
368,566 + B158DRAFT_2219 0.42 -2.0
368,571 + B158DRAFT_2219 0.43 -1.7
368,579 - B158DRAFT_2219 0.43 -0.9
368,579 - B158DRAFT_2219 0.43 -1.7
368,579 - B158DRAFT_2219 0.43 -0.1
368,586 + B158DRAFT_2219 0.44 -1.6
368,648 - B158DRAFT_2219 0.48 +0.1
368,676 + B158DRAFT_2219 0.50 -1.4
368,761 + B158DRAFT_2219 0.56 -1.0
368,761 + B158DRAFT_2219 0.56 -2.2
368,767 + B158DRAFT_2219 0.56 -1.6
368,769 - B158DRAFT_2219 0.56 -0.6
368,807 + B158DRAFT_2219 0.59 -1.3
368,824 + B158DRAFT_2219 0.60 -0.9
368,824 + B158DRAFT_2219 0.60 +0.4
368,832 - B158DRAFT_2219 0.60 -0.8
368,844 - B158DRAFT_2219 0.61 -1.4
368,886 - B158DRAFT_2219 0.64 -0.4

Or see this region's nucleotide sequence