Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1680 and B158DRAFT_1681 overlap by 53 nucleotides B158DRAFT_1681 and B158DRAFT_1682 are separated by 262 nucleotides B158DRAFT_1682 and B158DRAFT_1683 are separated by 10 nucleotides B158DRAFT_1683 and B158DRAFT_1684 are separated by 25 nucleotides B158DRAFT_1684 and B158DRAFT_1685 are separated by 8 nucleotides B158DRAFT_1685 and B158DRAFT_1686 are separated by 37 nucleotides
B158DRAFT_1680: B158DRAFT_1680 - putative thymidine phosphorylase, at 1,753,197 to 1,754,780
_1680
B158DRAFT_1681: B158DRAFT_1681 - hypothetical protein, at 1,754,728 to 1,755,096
_1681
B158DRAFT_1682: B158DRAFT_1682 - hypothetical protein, at 1,755,359 to 1,755,583
_1682
B158DRAFT_1683: B158DRAFT_1683 - Putative protein-S-isoprenylcysteine methyltransferase, at 1,755,594 to 1,756,247
_1683
B158DRAFT_1684: B158DRAFT_1684 - Protein of unknown function (DUF2933)., at 1,756,273 to 1,756,575
_1684
B158DRAFT_1685: B158DRAFT_1685 - nitrogen regulatory protein P-II family, at 1,756,584 to 1,756,922
_1685
B158DRAFT_1686: B158DRAFT_1686 - hypothetical protein, at 1,756,960 to 1,757,313
_1686
Position (kb)
1755
1756
1757 Strain fitness (log2 ratio)
-2
-1
0
1 at 1754.634 kb on + strand at 1754.656 kb on - strand at 1754.669 kb on - strand at 1754.681 kb on + strand at 1754.681 kb on + strand at 1754.681 kb on + strand at 1754.681 kb on + strand at 1754.681 kb on + strand at 1754.681 kb on + strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.689 kb on - strand at 1754.691 kb on + strand at 1754.691 kb on + strand at 1754.699 kb on - strand at 1754.699 kb on - strand at 1754.699 kb on - strand at 1754.699 kb on - strand at 1754.725 kb on + strand at 1754.768 kb on + strand at 1754.848 kb on + strand, within B158DRAFT_1681 at 1754.859 kb on + strand, within B158DRAFT_1681 at 1754.867 kb on - strand, within B158DRAFT_1681 at 1754.972 kb on + strand, within B158DRAFT_1681 at 1754.972 kb on + strand, within B158DRAFT_1681 at 1754.993 kb on + strand, within B158DRAFT_1681 at 1755.056 kb on - strand, within B158DRAFT_1681 at 1755.189 kb on + strand at 1755.189 kb on + strand at 1755.189 kb on + strand at 1755.275 kb on + strand at 1755.283 kb on - strand at 1755.283 kb on - strand at 1755.486 kb on + strand, within B158DRAFT_1682 at 1755.486 kb on - strand, within B158DRAFT_1682 at 1755.509 kb on + strand, within B158DRAFT_1682 at 1755.561 kb on - strand at 1755.561 kb on - strand at 1755.561 kb on - strand at 1755.608 kb on - strand at 1755.612 kb on + strand at 1755.643 kb on + strand at 1755.643 kb on + strand at 1755.643 kb on + strand at 1755.774 kb on + strand, within B158DRAFT_1683 at 1755.774 kb on + strand, within B158DRAFT_1683 at 1755.774 kb on + strand, within B158DRAFT_1683 at 1755.782 kb on - strand, within B158DRAFT_1683 at 1755.782 kb on - strand, within B158DRAFT_1683 at 1755.874 kb on + strand, within B158DRAFT_1683 at 1755.887 kb on - strand, within B158DRAFT_1683 at 1755.908 kb on + strand, within B158DRAFT_1683 at 1755.916 kb on - strand, within B158DRAFT_1683 at 1755.923 kb on + strand, within B158DRAFT_1683 at 1755.937 kb on - strand, within B158DRAFT_1683 at 1755.978 kb on + strand, within B158DRAFT_1683 at 1756.023 kb on + strand, within B158DRAFT_1683 at 1756.033 kb on + strand, within B158DRAFT_1683 at 1756.041 kb on - strand, within B158DRAFT_1683 at 1756.059 kb on - strand, within B158DRAFT_1683 at 1756.110 kb on + strand, within B158DRAFT_1683 at 1756.127 kb on + strand, within B158DRAFT_1683 at 1756.127 kb on + strand, within B158DRAFT_1683 at 1756.127 kb on + strand, within B158DRAFT_1683 at 1756.127 kb on + strand, within B158DRAFT_1683 at 1756.135 kb on - strand, within B158DRAFT_1683 at 1756.160 kb on - strand, within B158DRAFT_1683 at 1756.225 kb on + strand at 1756.233 kb on - strand at 1756.252 kb on - strand at 1756.271 kb on + strand at 1756.271 kb on + strand at 1756.271 kb on + strand at 1756.271 kb on + strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.279 kb on - strand at 1756.311 kb on + strand, within B158DRAFT_1684 at 1756.311 kb on + strand, within B158DRAFT_1684 at 1756.311 kb on + strand, within B158DRAFT_1684 at 1756.311 kb on + strand, within B158DRAFT_1684 at 1756.311 kb on + strand, within B158DRAFT_1684 at 1756.319 kb on - strand, within B158DRAFT_1684 at 1756.319 kb on - strand, within B158DRAFT_1684 at 1756.319 kb on - strand, within B158DRAFT_1684 at 1756.319 kb on - strand, within B158DRAFT_1684 at 1756.332 kb on - strand, within B158DRAFT_1684 at 1756.341 kb on - strand, within B158DRAFT_1684 at 1756.357 kb on - strand, within B158DRAFT_1684 at 1756.357 kb on - strand, within B158DRAFT_1684 at 1756.357 kb on - strand, within B158DRAFT_1684 at 1756.403 kb on + strand, within B158DRAFT_1684 at 1756.527 kb on + strand, within B158DRAFT_1684 at 1756.531 kb on - strand, within B158DRAFT_1684 at 1756.542 kb on + strand, within B158DRAFT_1684 at 1756.542 kb on + strand, within B158DRAFT_1684 at 1756.545 kb on - strand at 1756.550 kb on - strand at 1756.574 kb on + strand at 1756.582 kb on - strand at 1756.623 kb on - strand, within B158DRAFT_1685 at 1756.646 kb on - strand, within B158DRAFT_1685 at 1756.665 kb on + strand, within B158DRAFT_1685 at 1756.665 kb on + strand, within B158DRAFT_1685 at 1756.673 kb on - strand, within B158DRAFT_1685 at 1756.673 kb on - strand, within B158DRAFT_1685 at 1756.673 kb on - strand, within B158DRAFT_1685 at 1756.684 kb on + strand, within B158DRAFT_1685 at 1756.684 kb on + strand, within B158DRAFT_1685 at 1756.697 kb on - strand, within B158DRAFT_1685 at 1756.728 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.733 kb on + strand, within B158DRAFT_1685 at 1756.736 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.741 kb on - strand, within B158DRAFT_1685 at 1756.746 kb on - strand, within B158DRAFT_1685 at 1756.784 kb on + strand, within B158DRAFT_1685 at 1756.792 kb on - strand, within B158DRAFT_1685 at 1756.829 kb on + strand, within B158DRAFT_1685 at 1756.829 kb on + strand, within B158DRAFT_1685 at 1756.832 kb on - strand, within B158DRAFT_1685 at 1756.837 kb on - strand, within B158DRAFT_1685 at 1756.838 kb on + strand, within B158DRAFT_1685 at 1756.846 kb on - strand, within B158DRAFT_1685 at 1756.846 kb on - strand, within B158DRAFT_1685 at 1756.928 kb on + strand at 1756.939 kb on + strand at 1756.947 kb on - strand at 1756.947 kb on - strand at 1756.987 kb on + strand at 1757.016 kb on + strand, within B158DRAFT_1686 at 1757.061 kb on + strand, within B158DRAFT_1686 at 1757.069 kb on + strand, within B158DRAFT_1686 at 1757.085 kb on - strand, within B158DRAFT_1686 at 1757.162 kb on - strand, within B158DRAFT_1686 at 1757.180 kb on + strand, within B158DRAFT_1686 at 1757.180 kb on + strand, within B158DRAFT_1686 at 1757.180 kb on + strand, within B158DRAFT_1686 at 1757.188 kb on - strand, within B158DRAFT_1686 at 1757.189 kb on - strand, within B158DRAFT_1686 at 1757.219 kb on + strand, within B158DRAFT_1686 at 1757.227 kb on - strand, within B158DRAFT_1686 at 1757.229 kb on + strand, within B158DRAFT_1686 at 1757.244 kb on - strand, within B158DRAFT_1686
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,754,634 + +0.4 1,754,656 - +0.2 1,754,669 - -1.1 1,754,681 + -0.2 1,754,681 + +0.9 1,754,681 + -0.4 1,754,681 + -0.3 1,754,681 + -0.5 1,754,681 + -1.5 1,754,689 - +0.5 1,754,689 - -0.2 1,754,689 - -0.2 1,754,689 - -0.4 1,754,689 - -0.0 1,754,689 - +0.4 1,754,689 - -0.3 1,754,691 + -0.3 1,754,691 + -0.3 1,754,699 - -0.6 1,754,699 - +0.2 1,754,699 - +0.4 1,754,699 - -0.5 1,754,725 + -0.3 1,754,768 + +0.2 1,754,848 + B158DRAFT_1681 0.33 -0.1 1,754,859 + B158DRAFT_1681 0.36 -0.6 1,754,867 - B158DRAFT_1681 0.38 -0.1 1,754,972 + B158DRAFT_1681 0.66 -0.4 1,754,972 + B158DRAFT_1681 0.66 -0.1 1,754,993 + B158DRAFT_1681 0.72 +0.0 1,755,056 - B158DRAFT_1681 0.89 -0.2 1,755,189 + -0.3 1,755,189 + +0.7 1,755,189 + +0.0 1,755,275 + -0.1 1,755,283 - +0.7 1,755,283 - -0.3 1,755,486 + B158DRAFT_1682 0.56 -0.6 1,755,486 - B158DRAFT_1682 0.56 -1.2 1,755,509 + B158DRAFT_1682 0.67 -0.5 1,755,561 - -0.2 1,755,561 - +0.2 1,755,561 - -0.5 1,755,608 - -0.6 1,755,612 + +1.2 1,755,643 + +0.2 1,755,643 + +0.1 1,755,643 + +0.4 1,755,774 + B158DRAFT_1683 0.28 -0.9 1,755,774 + B158DRAFT_1683 0.28 -0.5 1,755,774 + B158DRAFT_1683 0.28 +0.1 1,755,782 - B158DRAFT_1683 0.29 -0.7 1,755,782 - B158DRAFT_1683 0.29 -0.4 1,755,874 + B158DRAFT_1683 0.43 -0.7 1,755,887 - B158DRAFT_1683 0.45 -0.1 1,755,908 + B158DRAFT_1683 0.48 +0.1 1,755,916 - B158DRAFT_1683 0.49 +0.6 1,755,923 + B158DRAFT_1683 0.50 +0.0 1,755,937 - B158DRAFT_1683 0.52 -0.6 1,755,978 + B158DRAFT_1683 0.59 +0.2 1,756,023 + B158DRAFT_1683 0.66 -0.5 1,756,033 + B158DRAFT_1683 0.67 -0.3 1,756,041 - B158DRAFT_1683 0.68 -0.2 1,756,059 - B158DRAFT_1683 0.71 -0.0 1,756,110 + B158DRAFT_1683 0.79 -0.6 1,756,127 + B158DRAFT_1683 0.81 -1.3 1,756,127 + B158DRAFT_1683 0.81 +0.1 1,756,127 + B158DRAFT_1683 0.81 -0.3 1,756,127 + B158DRAFT_1683 0.81 -0.6 1,756,135 - B158DRAFT_1683 0.83 +0.0 1,756,160 - B158DRAFT_1683 0.87 +0.2 1,756,225 + -1.4 1,756,233 - +0.2 1,756,252 - -0.1 1,756,271 + +0.1 1,756,271 + -0.8 1,756,271 + -0.1 1,756,271 + +0.1 1,756,279 - -0.3 1,756,279 - +0.3 1,756,279 - -0.1 1,756,279 - -0.5 1,756,279 - +0.1 1,756,279 - +0.7 1,756,279 - -0.8 1,756,311 + B158DRAFT_1684 0.13 -0.6 1,756,311 + B158DRAFT_1684 0.13 -0.1 1,756,311 + B158DRAFT_1684 0.13 -0.0 1,756,311 + B158DRAFT_1684 0.13 +0.2 1,756,311 + B158DRAFT_1684 0.13 +0.4 1,756,319 - B158DRAFT_1684 0.15 -0.7 1,756,319 - B158DRAFT_1684 0.15 -0.1 1,756,319 - B158DRAFT_1684 0.15 -0.6 1,756,319 - B158DRAFT_1684 0.15 -0.2 1,756,332 - B158DRAFT_1684 0.19 +0.2 1,756,341 - B158DRAFT_1684 0.22 -0.8 1,756,357 - B158DRAFT_1684 0.28 -0.8 1,756,357 - B158DRAFT_1684 0.28 +0.4 1,756,357 - B158DRAFT_1684 0.28 +0.0 1,756,403 + B158DRAFT_1684 0.43 +0.1 1,756,527 + B158DRAFT_1684 0.84 -0.3 1,756,531 - B158DRAFT_1684 0.85 -0.5 1,756,542 + B158DRAFT_1684 0.89 -0.4 1,756,542 + B158DRAFT_1684 0.89 +0.1 1,756,545 - +1.2 1,756,550 - -0.2 1,756,574 + +0.8 1,756,582 - -0.4 1,756,623 - B158DRAFT_1685 0.12 -1.0 1,756,646 - B158DRAFT_1685 0.18 +0.1 1,756,665 + B158DRAFT_1685 0.24 -0.5 1,756,665 + B158DRAFT_1685 0.24 -0.5 1,756,673 - B158DRAFT_1685 0.26 -0.1 1,756,673 - B158DRAFT_1685 0.26 -0.4 1,756,673 - B158DRAFT_1685 0.26 -0.7 1,756,684 + B158DRAFT_1685 0.29 +0.3 1,756,684 + B158DRAFT_1685 0.29 -1.0 1,756,697 - B158DRAFT_1685 0.33 -0.2 1,756,728 + B158DRAFT_1685 0.42 +0.8 1,756,733 + B158DRAFT_1685 0.44 -0.2 1,756,733 + B158DRAFT_1685 0.44 -0.4 1,756,733 + B158DRAFT_1685 0.44 +0.1 1,756,733 + B158DRAFT_1685 0.44 -0.3 1,756,733 + B158DRAFT_1685 0.44 -0.4 1,756,733 + B158DRAFT_1685 0.44 -0.6 1,756,733 + B158DRAFT_1685 0.44 -0.2 1,756,733 + B158DRAFT_1685 0.44 +0.4 1,756,733 + B158DRAFT_1685 0.44 -0.2 1,756,733 + B158DRAFT_1685 0.44 -0.0 1,756,736 - B158DRAFT_1685 0.45 -0.4 1,756,741 - B158DRAFT_1685 0.46 +0.1 1,756,741 - B158DRAFT_1685 0.46 -1.9 1,756,741 - B158DRAFT_1685 0.46 -0.1 1,756,741 - B158DRAFT_1685 0.46 +0.4 1,756,741 - B158DRAFT_1685 0.46 +0.0 1,756,741 - B158DRAFT_1685 0.46 +0.7 1,756,741 - B158DRAFT_1685 0.46 -0.1 1,756,741 - B158DRAFT_1685 0.46 -0.4 1,756,741 - B158DRAFT_1685 0.46 -1.4 1,756,741 - B158DRAFT_1685 0.46 -0.2 1,756,746 - B158DRAFT_1685 0.48 +0.0 1,756,784 + B158DRAFT_1685 0.59 +0.2 1,756,792 - B158DRAFT_1685 0.61 +0.1 1,756,829 + B158DRAFT_1685 0.72 +0.4 1,756,829 + B158DRAFT_1685 0.72 -0.1 1,756,832 - B158DRAFT_1685 0.73 +0.2 1,756,837 - B158DRAFT_1685 0.75 -0.4 1,756,838 + B158DRAFT_1685 0.75 +0.0 1,756,846 - B158DRAFT_1685 0.77 -0.6 1,756,846 - B158DRAFT_1685 0.77 +0.2 1,756,928 + +0.1 1,756,939 + -0.8 1,756,947 - -0.3 1,756,947 - -0.1 1,756,987 + +1.2 1,757,016 + B158DRAFT_1686 0.16 +0.5 1,757,061 + B158DRAFT_1686 0.29 +0.3 1,757,069 + B158DRAFT_1686 0.31 -0.1 1,757,085 - B158DRAFT_1686 0.35 -0.5 1,757,162 - B158DRAFT_1686 0.57 -0.8 1,757,180 + B158DRAFT_1686 0.62 -0.5 1,757,180 + B158DRAFT_1686 0.62 -0.3 1,757,180 + B158DRAFT_1686 0.62 +0.1 1,757,188 - B158DRAFT_1686 0.64 +0.0 1,757,189 - B158DRAFT_1686 0.65 -0.5 1,757,219 + B158DRAFT_1686 0.73 -0.2 1,757,227 - B158DRAFT_1686 0.75 +0.7 1,757,229 + B158DRAFT_1686 0.76 +0.1 1,757,244 - B158DRAFT_1686 0.80 +0.8
Or see this region's nucleotide sequence