Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1683

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1680 and B158DRAFT_1681 overlap by 53 nucleotidesB158DRAFT_1681 and B158DRAFT_1682 are separated by 262 nucleotidesB158DRAFT_1682 and B158DRAFT_1683 are separated by 10 nucleotidesB158DRAFT_1683 and B158DRAFT_1684 are separated by 25 nucleotidesB158DRAFT_1684 and B158DRAFT_1685 are separated by 8 nucleotidesB158DRAFT_1685 and B158DRAFT_1686 are separated by 37 nucleotides B158DRAFT_1680: B158DRAFT_1680 - putative thymidine phosphorylase, at 1,753,197 to 1,754,780 _1680 B158DRAFT_1681: B158DRAFT_1681 - hypothetical protein, at 1,754,728 to 1,755,096 _1681 B158DRAFT_1682: B158DRAFT_1682 - hypothetical protein, at 1,755,359 to 1,755,583 _1682 B158DRAFT_1683: B158DRAFT_1683 - Putative protein-S-isoprenylcysteine methyltransferase, at 1,755,594 to 1,756,247 _1683 B158DRAFT_1684: B158DRAFT_1684 - Protein of unknown function (DUF2933)., at 1,756,273 to 1,756,575 _1684 B158DRAFT_1685: B158DRAFT_1685 - nitrogen regulatory protein P-II family, at 1,756,584 to 1,756,922 _1685 B158DRAFT_1686: B158DRAFT_1686 - hypothetical protein, at 1,756,960 to 1,757,313 _1686 Position (kb) 1755 1756 1757Strain fitness (log2 ratio) -2 -1 0 1at 1754.634 kb on + strandat 1754.656 kb on - strandat 1754.669 kb on - strandat 1754.681 kb on + strandat 1754.681 kb on + strandat 1754.681 kb on + strandat 1754.681 kb on + strandat 1754.681 kb on + strandat 1754.681 kb on + strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.689 kb on - strandat 1754.691 kb on + strandat 1754.691 kb on + strandat 1754.699 kb on - strandat 1754.699 kb on - strandat 1754.699 kb on - strandat 1754.699 kb on - strandat 1754.725 kb on + strandat 1754.768 kb on + strandat 1754.848 kb on + strand, within B158DRAFT_1681at 1754.859 kb on + strand, within B158DRAFT_1681at 1754.867 kb on - strand, within B158DRAFT_1681at 1754.972 kb on + strand, within B158DRAFT_1681at 1754.972 kb on + strand, within B158DRAFT_1681at 1754.993 kb on + strand, within B158DRAFT_1681at 1755.056 kb on - strand, within B158DRAFT_1681at 1755.189 kb on + strandat 1755.189 kb on + strandat 1755.189 kb on + strandat 1755.275 kb on + strandat 1755.283 kb on - strandat 1755.283 kb on - strandat 1755.486 kb on + strand, within B158DRAFT_1682at 1755.486 kb on - strand, within B158DRAFT_1682at 1755.509 kb on + strand, within B158DRAFT_1682at 1755.561 kb on - strandat 1755.561 kb on - strandat 1755.561 kb on - strandat 1755.608 kb on - strandat 1755.612 kb on + strandat 1755.643 kb on + strandat 1755.643 kb on + strandat 1755.643 kb on + strandat 1755.774 kb on + strand, within B158DRAFT_1683at 1755.774 kb on + strand, within B158DRAFT_1683at 1755.774 kb on + strand, within B158DRAFT_1683at 1755.782 kb on - strand, within B158DRAFT_1683at 1755.782 kb on - strand, within B158DRAFT_1683at 1755.874 kb on + strand, within B158DRAFT_1683at 1755.887 kb on - strand, within B158DRAFT_1683at 1755.908 kb on + strand, within B158DRAFT_1683at 1755.916 kb on - strand, within B158DRAFT_1683at 1755.923 kb on + strand, within B158DRAFT_1683at 1755.937 kb on - strand, within B158DRAFT_1683at 1755.978 kb on + strand, within B158DRAFT_1683at 1756.023 kb on + strand, within B158DRAFT_1683at 1756.033 kb on + strand, within B158DRAFT_1683at 1756.041 kb on - strand, within B158DRAFT_1683at 1756.059 kb on - strand, within B158DRAFT_1683at 1756.110 kb on + strand, within B158DRAFT_1683at 1756.127 kb on + strand, within B158DRAFT_1683at 1756.127 kb on + strand, within B158DRAFT_1683at 1756.127 kb on + strand, within B158DRAFT_1683at 1756.127 kb on + strand, within B158DRAFT_1683at 1756.135 kb on - strand, within B158DRAFT_1683at 1756.160 kb on - strand, within B158DRAFT_1683at 1756.225 kb on + strandat 1756.233 kb on - strandat 1756.252 kb on - strandat 1756.271 kb on + strandat 1756.271 kb on + strandat 1756.271 kb on + strandat 1756.271 kb on + strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.279 kb on - strandat 1756.311 kb on + strand, within B158DRAFT_1684at 1756.311 kb on + strand, within B158DRAFT_1684at 1756.311 kb on + strand, within B158DRAFT_1684at 1756.311 kb on + strand, within B158DRAFT_1684at 1756.311 kb on + strand, within B158DRAFT_1684at 1756.319 kb on - strand, within B158DRAFT_1684at 1756.319 kb on - strand, within B158DRAFT_1684at 1756.319 kb on - strand, within B158DRAFT_1684at 1756.319 kb on - strand, within B158DRAFT_1684at 1756.332 kb on - strand, within B158DRAFT_1684at 1756.341 kb on - strand, within B158DRAFT_1684at 1756.357 kb on - strand, within B158DRAFT_1684at 1756.357 kb on - strand, within B158DRAFT_1684at 1756.357 kb on - strand, within B158DRAFT_1684at 1756.403 kb on + strand, within B158DRAFT_1684at 1756.527 kb on + strand, within B158DRAFT_1684at 1756.531 kb on - strand, within B158DRAFT_1684at 1756.542 kb on + strand, within B158DRAFT_1684at 1756.542 kb on + strand, within B158DRAFT_1684at 1756.545 kb on - strandat 1756.550 kb on - strandat 1756.574 kb on + strandat 1756.582 kb on - strandat 1756.623 kb on - strand, within B158DRAFT_1685at 1756.646 kb on - strand, within B158DRAFT_1685at 1756.665 kb on + strand, within B158DRAFT_1685at 1756.665 kb on + strand, within B158DRAFT_1685at 1756.673 kb on - strand, within B158DRAFT_1685at 1756.673 kb on - strand, within B158DRAFT_1685at 1756.673 kb on - strand, within B158DRAFT_1685at 1756.684 kb on + strand, within B158DRAFT_1685at 1756.684 kb on + strand, within B158DRAFT_1685at 1756.697 kb on - strand, within B158DRAFT_1685at 1756.728 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.733 kb on + strand, within B158DRAFT_1685at 1756.736 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.741 kb on - strand, within B158DRAFT_1685at 1756.746 kb on - strand, within B158DRAFT_1685at 1756.784 kb on + strand, within B158DRAFT_1685at 1756.792 kb on - strand, within B158DRAFT_1685at 1756.829 kb on + strand, within B158DRAFT_1685at 1756.829 kb on + strand, within B158DRAFT_1685at 1756.832 kb on - strand, within B158DRAFT_1685at 1756.837 kb on - strand, within B158DRAFT_1685at 1756.838 kb on + strand, within B158DRAFT_1685at 1756.846 kb on - strand, within B158DRAFT_1685at 1756.846 kb on - strand, within B158DRAFT_1685at 1756.928 kb on + strandat 1756.939 kb on + strandat 1756.947 kb on - strandat 1756.947 kb on - strandat 1756.987 kb on + strandat 1757.016 kb on + strand, within B158DRAFT_1686at 1757.061 kb on + strand, within B158DRAFT_1686at 1757.069 kb on + strand, within B158DRAFT_1686at 1757.085 kb on - strand, within B158DRAFT_1686at 1757.162 kb on - strand, within B158DRAFT_1686at 1757.180 kb on + strand, within B158DRAFT_1686at 1757.180 kb on + strand, within B158DRAFT_1686at 1757.180 kb on + strand, within B158DRAFT_1686at 1757.188 kb on - strand, within B158DRAFT_1686at 1757.189 kb on - strand, within B158DRAFT_1686at 1757.219 kb on + strand, within B158DRAFT_1686at 1757.227 kb on - strand, within B158DRAFT_1686at 1757.229 kb on + strand, within B158DRAFT_1686at 1757.244 kb on - strand, within B158DRAFT_1686

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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1,754,634 + +0.4
1,754,656 - +0.2
1,754,669 - -1.1
1,754,681 + -0.2
1,754,681 + +0.9
1,754,681 + -0.4
1,754,681 + -0.3
1,754,681 + -0.5
1,754,681 + -1.5
1,754,689 - +0.5
1,754,689 - -0.2
1,754,689 - -0.2
1,754,689 - -0.4
1,754,689 - -0.0
1,754,689 - +0.4
1,754,689 - -0.3
1,754,691 + -0.3
1,754,691 + -0.3
1,754,699 - -0.6
1,754,699 - +0.2
1,754,699 - +0.4
1,754,699 - -0.5
1,754,725 + -0.3
1,754,768 + +0.2
1,754,848 + B158DRAFT_1681 0.33 -0.1
1,754,859 + B158DRAFT_1681 0.36 -0.6
1,754,867 - B158DRAFT_1681 0.38 -0.1
1,754,972 + B158DRAFT_1681 0.66 -0.4
1,754,972 + B158DRAFT_1681 0.66 -0.1
1,754,993 + B158DRAFT_1681 0.72 +0.0
1,755,056 - B158DRAFT_1681 0.89 -0.2
1,755,189 + -0.3
1,755,189 + +0.7
1,755,189 + +0.0
1,755,275 + -0.1
1,755,283 - +0.7
1,755,283 - -0.3
1,755,486 + B158DRAFT_1682 0.56 -0.6
1,755,486 - B158DRAFT_1682 0.56 -1.2
1,755,509 + B158DRAFT_1682 0.67 -0.5
1,755,561 - -0.2
1,755,561 - +0.2
1,755,561 - -0.5
1,755,608 - -0.6
1,755,612 + +1.2
1,755,643 + +0.2
1,755,643 + +0.1
1,755,643 + +0.4
1,755,774 + B158DRAFT_1683 0.28 -0.9
1,755,774 + B158DRAFT_1683 0.28 -0.5
1,755,774 + B158DRAFT_1683 0.28 +0.1
1,755,782 - B158DRAFT_1683 0.29 -0.7
1,755,782 - B158DRAFT_1683 0.29 -0.4
1,755,874 + B158DRAFT_1683 0.43 -0.7
1,755,887 - B158DRAFT_1683 0.45 -0.1
1,755,908 + B158DRAFT_1683 0.48 +0.1
1,755,916 - B158DRAFT_1683 0.49 +0.6
1,755,923 + B158DRAFT_1683 0.50 +0.0
1,755,937 - B158DRAFT_1683 0.52 -0.6
1,755,978 + B158DRAFT_1683 0.59 +0.2
1,756,023 + B158DRAFT_1683 0.66 -0.5
1,756,033 + B158DRAFT_1683 0.67 -0.3
1,756,041 - B158DRAFT_1683 0.68 -0.2
1,756,059 - B158DRAFT_1683 0.71 -0.0
1,756,110 + B158DRAFT_1683 0.79 -0.6
1,756,127 + B158DRAFT_1683 0.81 -1.3
1,756,127 + B158DRAFT_1683 0.81 +0.1
1,756,127 + B158DRAFT_1683 0.81 -0.3
1,756,127 + B158DRAFT_1683 0.81 -0.6
1,756,135 - B158DRAFT_1683 0.83 +0.0
1,756,160 - B158DRAFT_1683 0.87 +0.2
1,756,225 + -1.4
1,756,233 - +0.2
1,756,252 - -0.1
1,756,271 + +0.1
1,756,271 + -0.8
1,756,271 + -0.1
1,756,271 + +0.1
1,756,279 - -0.3
1,756,279 - +0.3
1,756,279 - -0.1
1,756,279 - -0.5
1,756,279 - +0.1
1,756,279 - +0.7
1,756,279 - -0.8
1,756,311 + B158DRAFT_1684 0.13 -0.6
1,756,311 + B158DRAFT_1684 0.13 -0.1
1,756,311 + B158DRAFT_1684 0.13 -0.0
1,756,311 + B158DRAFT_1684 0.13 +0.2
1,756,311 + B158DRAFT_1684 0.13 +0.4
1,756,319 - B158DRAFT_1684 0.15 -0.7
1,756,319 - B158DRAFT_1684 0.15 -0.1
1,756,319 - B158DRAFT_1684 0.15 -0.6
1,756,319 - B158DRAFT_1684 0.15 -0.2
1,756,332 - B158DRAFT_1684 0.19 +0.2
1,756,341 - B158DRAFT_1684 0.22 -0.8
1,756,357 - B158DRAFT_1684 0.28 -0.8
1,756,357 - B158DRAFT_1684 0.28 +0.4
1,756,357 - B158DRAFT_1684 0.28 +0.0
1,756,403 + B158DRAFT_1684 0.43 +0.1
1,756,527 + B158DRAFT_1684 0.84 -0.3
1,756,531 - B158DRAFT_1684 0.85 -0.5
1,756,542 + B158DRAFT_1684 0.89 -0.4
1,756,542 + B158DRAFT_1684 0.89 +0.1
1,756,545 - +1.2
1,756,550 - -0.2
1,756,574 + +0.8
1,756,582 - -0.4
1,756,623 - B158DRAFT_1685 0.12 -1.0
1,756,646 - B158DRAFT_1685 0.18 +0.1
1,756,665 + B158DRAFT_1685 0.24 -0.5
1,756,665 + B158DRAFT_1685 0.24 -0.5
1,756,673 - B158DRAFT_1685 0.26 -0.1
1,756,673 - B158DRAFT_1685 0.26 -0.4
1,756,673 - B158DRAFT_1685 0.26 -0.7
1,756,684 + B158DRAFT_1685 0.29 +0.3
1,756,684 + B158DRAFT_1685 0.29 -1.0
1,756,697 - B158DRAFT_1685 0.33 -0.2
1,756,728 + B158DRAFT_1685 0.42 +0.8
1,756,733 + B158DRAFT_1685 0.44 -0.2
1,756,733 + B158DRAFT_1685 0.44 -0.4
1,756,733 + B158DRAFT_1685 0.44 +0.1
1,756,733 + B158DRAFT_1685 0.44 -0.3
1,756,733 + B158DRAFT_1685 0.44 -0.4
1,756,733 + B158DRAFT_1685 0.44 -0.6
1,756,733 + B158DRAFT_1685 0.44 -0.2
1,756,733 + B158DRAFT_1685 0.44 +0.4
1,756,733 + B158DRAFT_1685 0.44 -0.2
1,756,733 + B158DRAFT_1685 0.44 -0.0
1,756,736 - B158DRAFT_1685 0.45 -0.4
1,756,741 - B158DRAFT_1685 0.46 +0.1
1,756,741 - B158DRAFT_1685 0.46 -1.9
1,756,741 - B158DRAFT_1685 0.46 -0.1
1,756,741 - B158DRAFT_1685 0.46 +0.4
1,756,741 - B158DRAFT_1685 0.46 +0.0
1,756,741 - B158DRAFT_1685 0.46 +0.7
1,756,741 - B158DRAFT_1685 0.46 -0.1
1,756,741 - B158DRAFT_1685 0.46 -0.4
1,756,741 - B158DRAFT_1685 0.46 -1.4
1,756,741 - B158DRAFT_1685 0.46 -0.2
1,756,746 - B158DRAFT_1685 0.48 +0.0
1,756,784 + B158DRAFT_1685 0.59 +0.2
1,756,792 - B158DRAFT_1685 0.61 +0.1
1,756,829 + B158DRAFT_1685 0.72 +0.4
1,756,829 + B158DRAFT_1685 0.72 -0.1
1,756,832 - B158DRAFT_1685 0.73 +0.2
1,756,837 - B158DRAFT_1685 0.75 -0.4
1,756,838 + B158DRAFT_1685 0.75 +0.0
1,756,846 - B158DRAFT_1685 0.77 -0.6
1,756,846 - B158DRAFT_1685 0.77 +0.2
1,756,928 + +0.1
1,756,939 + -0.8
1,756,947 - -0.3
1,756,947 - -0.1
1,756,987 + +1.2
1,757,016 + B158DRAFT_1686 0.16 +0.5
1,757,061 + B158DRAFT_1686 0.29 +0.3
1,757,069 + B158DRAFT_1686 0.31 -0.1
1,757,085 - B158DRAFT_1686 0.35 -0.5
1,757,162 - B158DRAFT_1686 0.57 -0.8
1,757,180 + B158DRAFT_1686 0.62 -0.5
1,757,180 + B158DRAFT_1686 0.62 -0.3
1,757,180 + B158DRAFT_1686 0.62 +0.1
1,757,188 - B158DRAFT_1686 0.64 +0.0
1,757,189 - B158DRAFT_1686 0.65 -0.5
1,757,219 + B158DRAFT_1686 0.73 -0.2
1,757,227 - B158DRAFT_1686 0.75 +0.7
1,757,229 + B158DRAFT_1686 0.76 +0.1
1,757,244 - B158DRAFT_1686 0.80 +0.8

Or see this region's nucleotide sequence