Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1599 and B158DRAFT_1600 overlap by 11 nucleotides B158DRAFT_1600 and B158DRAFT_1601 overlap by 11 nucleotides B158DRAFT_1601 and B158DRAFT_1602 are separated by 30 nucleotides B158DRAFT_1602 and B158DRAFT_1603 are separated by 91 nucleotides
B158DRAFT_1599: B158DRAFT_1599 - lipid-A-disaccharide kinase (EC 2.7.1.130), at 1,659,786 to 1,660,751
_1599
B158DRAFT_1600: B158DRAFT_1600 - Uncharacterized conserved protein, at 1,660,741 to 1,660,926
_1600
B158DRAFT_1601: B158DRAFT_1601 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 1,660,916 to 1,661,686
_1601
B158DRAFT_1602: B158DRAFT_1602 - Protein-tyrosine-phosphatase, at 1,661,717 to 1,662,202
_1602
B158DRAFT_1603: B158DRAFT_1603 - arginyl-tRNA synthetase (EC 6.1.1.19), at 1,662,294 to 1,664,060
_1603
Position (kb)
1660
1661
1662 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1660.724 kb on + strand at 1660.724 kb on + strand at 1661.644 kb on + strand at 1661.670 kb on - strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.749 kb on + strand at 1661.749 kb on + strand at 1661.755 kb on + strand at 1661.757 kb on - strand at 1661.780 kb on - strand, within B158DRAFT_1602 at 1661.818 kb on - strand, within B158DRAFT_1602 at 1661.828 kb on - strand, within B158DRAFT_1602 at 1661.850 kb on + strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.877 kb on + strand, within B158DRAFT_1602 at 1661.885 kb on - strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.936 kb on + strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.941 kb on + strand, within B158DRAFT_1602 at 1661.942 kb on - strand, within B158DRAFT_1602 at 1661.974 kb on + strand, within B158DRAFT_1602 at 1661.982 kb on - strand, within B158DRAFT_1602 at 1662.007 kb on - strand, within B158DRAFT_1602 at 1662.024 kb on - strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on - strand, within B158DRAFT_1602 at 1662.111 kb on - strand, within B158DRAFT_1602 at 1662.148 kb on + strand, within B158DRAFT_1602 at 1662.156 kb on - strand at 1662.156 kb on - strand at 1662.170 kb on - strand at 1662.227 kb on + strand at 1662.236 kb on + strand at 1662.236 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,660,724 + -0.3 1,660,724 + +1.4 1,661,644 + -0.9 1,661,670 - +1.4 1,661,708 + -0.4 1,661,708 + -0.5 1,661,708 + -0.3 1,661,708 + -0.3 1,661,708 + -0.5 1,661,708 + +0.2 1,661,708 + +0.0 1,661,708 + -0.0 1,661,708 + +0.0 1,661,716 - -0.1 1,661,716 - -3.4 1,661,716 - +0.1 1,661,749 + -0.2 1,661,749 + -0.4 1,661,755 + -0.9 1,661,757 - -0.7 1,661,780 - B158DRAFT_1602 0.13 +0.7 1,661,818 - B158DRAFT_1602 0.21 -0.2 1,661,828 - B158DRAFT_1602 0.23 -1.9 1,661,850 + B158DRAFT_1602 0.27 +0.1 1,661,853 - B158DRAFT_1602 0.28 -1.2 1,661,853 - B158DRAFT_1602 0.28 +0.9 1,661,877 + B158DRAFT_1602 0.33 -1.3 1,661,885 - B158DRAFT_1602 0.35 -0.3 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 -2.6 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.0 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.5 1,661,909 + B158DRAFT_1602 0.40 -0.2 1,661,909 + B158DRAFT_1602 0.40 -1.0 1,661,909 + B158DRAFT_1602 0.40 +0.4 1,661,909 + B158DRAFT_1602 0.40 -0.8 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 +0.4 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -1.4 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 +0.9 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 +0.0 1,661,917 - B158DRAFT_1602 0.41 +0.3 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,917 - B158DRAFT_1602 0.41 -0.6 1,661,917 - B158DRAFT_1602 0.41 +0.3 1,661,917 - B158DRAFT_1602 0.41 +0.6 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.6 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.8 1,661,917 - B158DRAFT_1602 0.41 -1.2 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,917 - B158DRAFT_1602 0.41 -0.6 1,661,917 - B158DRAFT_1602 0.41 -1.0 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 +1.0 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,931 + B158DRAFT_1602 0.44 -0.3 1,661,931 + B158DRAFT_1602 0.44 -0.1 1,661,931 + B158DRAFT_1602 0.44 -0.7 1,661,936 + B158DRAFT_1602 0.45 +0.8 1,661,939 - B158DRAFT_1602 0.46 -0.2 1,661,939 - B158DRAFT_1602 0.46 -1.4 1,661,939 - B158DRAFT_1602 0.46 +0.2 1,661,939 - B158DRAFT_1602 0.46 +0.1 1,661,941 + B158DRAFT_1602 0.46 -0.3 1,661,942 - B158DRAFT_1602 0.46 -0.3 1,661,974 + B158DRAFT_1602 0.53 -0.2 1,661,982 - B158DRAFT_1602 0.55 -0.7 1,662,007 - B158DRAFT_1602 0.60 +1.4 1,662,024 - B158DRAFT_1602 0.63 -0.5 1,662,103 + B158DRAFT_1602 0.79 -0.5 1,662,103 + B158DRAFT_1602 0.79 -0.2 1,662,103 - B158DRAFT_1602 0.79 +0.1 1,662,111 - B158DRAFT_1602 0.81 -0.6 1,662,148 + B158DRAFT_1602 0.89 -0.3 1,662,156 - +0.0 1,662,156 - -0.9 1,662,170 - -0.4 1,662,227 + -0.9 1,662,236 + -0.4 1,662,236 + +0.5
Or see this region's nucleotide sequence