Experiment: m.b. perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1325 and B158DRAFT_1326 are separated by 3 nucleotides B158DRAFT_1326 and B158DRAFT_1327 are separated by 6 nucleotides B158DRAFT_1327 and B158DRAFT_1328 are separated by 11 nucleotides B158DRAFT_1328 and B158DRAFT_1329 overlap by 11 nucleotides B158DRAFT_1329 and B158DRAFT_1330 overlap by 4 nucleotides B158DRAFT_1330 and B158DRAFT_1331 are separated by 3 nucleotides
B158DRAFT_1325: B158DRAFT_1325 - heme exporter protein CcmC, at 1,368,295 to 1,369,068
_1325
B158DRAFT_1326: B158DRAFT_1326 - heme exporter protein CcmD, at 1,369,072 to 1,369,296
_1326
B158DRAFT_1327: B158DRAFT_1327 - Cytochrome c-type biogenesis protein CcmE, at 1,369,303 to 1,369,782
_1327
B158DRAFT_1328: B158DRAFT_1328 - c-type cytochrome biogenesis protein CcmF, at 1,369,794 to 1,371,782
_1328
B158DRAFT_1329: B158DRAFT_1329 - periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily, at 1,371,772 to 1,372,338
_1329
B158DRAFT_1330: B158DRAFT_1330 - Uncharacterized protein involved in biosynthesis of c-type cytochromes, at 1,372,335 to 1,372,769
_1330
B158DRAFT_1331: B158DRAFT_1331 - Cytochrome c biogenesis factor, at 1,372,773 to 1,373,798
_1331
Position (kb) 1369
1370
1371
1372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1368.798 kb on - strand, within B158DRAFT_1325 at 1368.798 kb on - strand, within B158DRAFT_1325 at 1369.015 kb on + strand at 1369.056 kb on + strand at 1369.248 kb on + strand, within B158DRAFT_1326 at 1369.248 kb on + strand, within B158DRAFT_1326 at 1369.251 kb on - strand, within B158DRAFT_1326 at 1369.359 kb on + strand, within B158DRAFT_1327 at 1369.367 kb on - strand, within B158DRAFT_1327 at 1369.373 kb on + strand, within B158DRAFT_1327 at 1369.410 kb on + strand, within B158DRAFT_1327 at 1369.410 kb on + strand, within B158DRAFT_1327 at 1369.447 kb on + strand, within B158DRAFT_1327 at 1369.490 kb on + strand, within B158DRAFT_1327 at 1369.552 kb on - strand, within B158DRAFT_1327 at 1370.206 kb on + strand, within B158DRAFT_1328 at 1370.206 kb on + strand, within B158DRAFT_1328 at 1370.221 kb on + strand, within B158DRAFT_1328 at 1370.221 kb on + strand, within B158DRAFT_1328 at 1370.229 kb on - strand, within B158DRAFT_1328 at 1370.293 kb on + strand, within B158DRAFT_1328 at 1370.393 kb on + strand, within B158DRAFT_1328 at 1370.463 kb on + strand, within B158DRAFT_1328 at 1370.546 kb on + strand, within B158DRAFT_1328 at 1370.551 kb on + strand, within B158DRAFT_1328 at 1370.622 kb on + strand, within B158DRAFT_1328 at 1370.657 kb on + strand, within B158DRAFT_1328 at 1370.658 kb on + strand, within B158DRAFT_1328 at 1370.785 kb on - strand, within B158DRAFT_1328 at 1370.787 kb on + strand, within B158DRAFT_1328 at 1370.874 kb on + strand, within B158DRAFT_1328 at 1370.942 kb on + strand, within B158DRAFT_1328 at 1371.013 kb on + strand, within B158DRAFT_1328 at 1371.251 kb on - strand, within B158DRAFT_1328 at 1371.501 kb on + strand, within B158DRAFT_1328 at 1371.510 kb on + strand, within B158DRAFT_1328 at 1371.511 kb on - strand, within B158DRAFT_1328 at 1371.587 kb on + strand at 1371.661 kb on + strand at 1371.797 kb on + strand at 1371.805 kb on - strand at 1371.828 kb on + strand at 1371.924 kb on + strand, within B158DRAFT_1329 at 1371.931 kb on + strand, within B158DRAFT_1329 at 1371.949 kb on + strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1372.163 kb on - strand, within B158DRAFT_1329 at 1372.191 kb on - strand, within B158DRAFT_1329 at 1372.350 kb on + strand at 1372.603 kb on + strand, within B158DRAFT_1330 at 1372.611 kb on - strand, within B158DRAFT_1330 at 1372.723 kb on + strand, within B158DRAFT_1330 at 1372.767 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM remove 1,368,798 - B158DRAFT_1325 0.65 -0.9 1,368,798 - B158DRAFT_1325 0.65 -1.3 1,369,015 + +0.1 1,369,056 + -0.4 1,369,248 + B158DRAFT_1326 0.78 -0.8 1,369,248 + B158DRAFT_1326 0.78 -0.8 1,369,251 - B158DRAFT_1326 0.80 -1.5 1,369,359 + B158DRAFT_1327 0.12 -3.0 1,369,367 - B158DRAFT_1327 0.13 -0.6 1,369,373 + B158DRAFT_1327 0.15 -0.2 1,369,410 + B158DRAFT_1327 0.22 -0.4 1,369,410 + B158DRAFT_1327 0.22 +0.3 1,369,447 + B158DRAFT_1327 0.30 +0.6 1,369,490 + B158DRAFT_1327 0.39 -0.1 1,369,552 - B158DRAFT_1327 0.52 +0.8 1,370,206 + B158DRAFT_1328 0.21 -0.9 1,370,206 + B158DRAFT_1328 0.21 +0.3 1,370,221 + B158DRAFT_1328 0.21 +0.1 1,370,221 + B158DRAFT_1328 0.21 -1.1 1,370,229 - B158DRAFT_1328 0.22 +0.1 1,370,293 + B158DRAFT_1328 0.25 +0.3 1,370,393 + B158DRAFT_1328 0.30 -0.4 1,370,463 + B158DRAFT_1328 0.34 +0.6 1,370,546 + B158DRAFT_1328 0.38 +1.1 1,370,551 + B158DRAFT_1328 0.38 +0.1 1,370,622 + B158DRAFT_1328 0.42 -0.1 1,370,657 + B158DRAFT_1328 0.43 -0.4 1,370,658 + B158DRAFT_1328 0.43 +1.0 1,370,785 - B158DRAFT_1328 0.50 -0.5 1,370,787 + B158DRAFT_1328 0.50 -0.2 1,370,874 + B158DRAFT_1328 0.54 +0.2 1,370,942 + B158DRAFT_1328 0.58 -0.2 1,371,013 + B158DRAFT_1328 0.61 -1.3 1,371,251 - B158DRAFT_1328 0.73 +0.1 1,371,501 + B158DRAFT_1328 0.86 -0.9 1,371,510 + B158DRAFT_1328 0.86 -1.3 1,371,511 - B158DRAFT_1328 0.86 +1.2 1,371,587 + -0.1 1,371,661 + -1.7 1,371,797 + -1.2 1,371,805 - -1.8 1,371,828 + -2.3 1,371,924 + B158DRAFT_1329 0.27 +1.1 1,371,931 + B158DRAFT_1329 0.28 +0.3 1,371,949 + B158DRAFT_1329 0.31 -0.5 1,371,957 - B158DRAFT_1329 0.33 +0.6 1,371,957 - B158DRAFT_1329 0.33 -0.5 1,372,163 - B158DRAFT_1329 0.69 -1.3 1,372,191 - B158DRAFT_1329 0.74 -0.8 1,372,350 + -0.0 1,372,603 + B158DRAFT_1330 0.62 +3.1 1,372,611 - B158DRAFT_1330 0.63 +0.9 1,372,723 + B158DRAFT_1330 0.89 +0.1 1,372,767 - +0.5
Or see this region's nucleotide sequence