Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0462

Experiment: m.b. perchlorate 100 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0461 and B158DRAFT_0462 are separated by 3 nucleotidesB158DRAFT_0462 and B158DRAFT_0463 are separated by 61 nucleotides B158DRAFT_0461: B158DRAFT_0461 - Uncharacterized protein conserved in bacteria, at 462,962 to 463,993 _0461 B158DRAFT_0462: B158DRAFT_0462 - hypothetical protein, at 463,997 to 464,896 _0462 B158DRAFT_0463: B158DRAFT_0463 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 464,958 to 467,390 _0463 Position (kb) 463 464 465Strain fitness (log2 ratio) -2 -1 0 1 2 3at 463.013 kb on + strandat 463.013 kb on + strandat 463.023 kb on + strandat 463.038 kb on - strandat 463.064 kb on - strandat 463.092 kb on + strand, within B158DRAFT_0461at 463.092 kb on + strand, within B158DRAFT_0461at 463.092 kb on + strand, within B158DRAFT_0461at 463.100 kb on - strand, within B158DRAFT_0461at 463.100 kb on - strand, within B158DRAFT_0461at 463.100 kb on - strand, within B158DRAFT_0461at 463.100 kb on - strand, within B158DRAFT_0461at 463.157 kb on + strand, within B158DRAFT_0461at 463.157 kb on + strand, within B158DRAFT_0461at 463.165 kb on - strand, within B158DRAFT_0461at 463.172 kb on - strand, within B158DRAFT_0461at 463.221 kb on + strand, within B158DRAFT_0461at 463.432 kb on + strand, within B158DRAFT_0461at 463.432 kb on + strand, within B158DRAFT_0461at 463.439 kb on + strand, within B158DRAFT_0461at 463.439 kb on + strand, within B158DRAFT_0461at 463.455 kb on - strand, within B158DRAFT_0461at 463.459 kb on + strand, within B158DRAFT_0461at 463.459 kb on + strand, within B158DRAFT_0461at 463.459 kb on + strand, within B158DRAFT_0461at 463.459 kb on + strand, within B158DRAFT_0461at 463.467 kb on + strand, within B158DRAFT_0461at 463.467 kb on - strand, within B158DRAFT_0461at 463.467 kb on - strand, within B158DRAFT_0461at 463.467 kb on - strand, within B158DRAFT_0461at 463.467 kb on - strand, within B158DRAFT_0461at 463.469 kb on + strand, within B158DRAFT_0461at 463.488 kb on + strand, within B158DRAFT_0461at 463.508 kb on - strand, within B158DRAFT_0461at 463.513 kb on - strand, within B158DRAFT_0461at 463.513 kb on - strand, within B158DRAFT_0461at 463.554 kb on + strand, within B158DRAFT_0461at 463.614 kb on - strand, within B158DRAFT_0461at 463.639 kb on + strand, within B158DRAFT_0461at 463.708 kb on + strand, within B158DRAFT_0461at 463.805 kb on + strand, within B158DRAFT_0461at 463.827 kb on - strand, within B158DRAFT_0461at 463.829 kb on + strand, within B158DRAFT_0461at 463.834 kb on - strand, within B158DRAFT_0461at 463.837 kb on + strand, within B158DRAFT_0461at 463.837 kb on + strand, within B158DRAFT_0461at 463.837 kb on - strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.842 kb on + strand, within B158DRAFT_0461at 463.844 kb on - strand, within B158DRAFT_0461at 463.845 kb on - strand, within B158DRAFT_0461at 463.845 kb on - strand, within B158DRAFT_0461at 463.850 kb on - strand, within B158DRAFT_0461at 463.850 kb on - strand, within B158DRAFT_0461at 463.850 kb on - strand, within B158DRAFT_0461at 463.850 kb on - strand, within B158DRAFT_0461at 463.885 kb on - strand, within B158DRAFT_0461at 463.901 kb on - strandat 463.983 kb on + strandat 463.988 kb on + strandat 464.107 kb on + strand, within B158DRAFT_0462at 464.107 kb on + strand, within B158DRAFT_0462at 464.115 kb on - strand, within B158DRAFT_0462at 464.115 kb on - strand, within B158DRAFT_0462at 464.288 kb on + strand, within B158DRAFT_0462at 464.288 kb on + strand, within B158DRAFT_0462at 464.302 kb on + strand, within B158DRAFT_0462at 464.302 kb on - strand, within B158DRAFT_0462at 464.349 kb on - strand, within B158DRAFT_0462at 464.360 kb on + strand, within B158DRAFT_0462at 464.360 kb on + strand, within B158DRAFT_0462at 464.406 kb on + strand, within B158DRAFT_0462at 464.425 kb on - strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.438 kb on + strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.446 kb on - strand, within B158DRAFT_0462at 464.492 kb on + strand, within B158DRAFT_0462at 464.500 kb on - strand, within B158DRAFT_0462at 464.500 kb on - strand, within B158DRAFT_0462at 464.523 kb on + strand, within B158DRAFT_0462at 464.523 kb on + strand, within B158DRAFT_0462at 464.531 kb on - strand, within B158DRAFT_0462at 464.531 kb on - strand, within B158DRAFT_0462at 464.531 kb on - strand, within B158DRAFT_0462at 464.531 kb on - strand, within B158DRAFT_0462at 464.605 kb on + strand, within B158DRAFT_0462at 464.666 kb on - strand, within B158DRAFT_0462at 464.680 kb on - strand, within B158DRAFT_0462at 464.775 kb on + strand, within B158DRAFT_0462at 464.775 kb on + strand, within B158DRAFT_0462at 464.775 kb on + strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.783 kb on - strand, within B158DRAFT_0462at 464.866 kb on + strandat 464.866 kb on + strandat 464.866 kb on + strandat 464.866 kb on + strandat 464.874 kb on - strandat 464.874 kb on - strandat 464.874 kb on - strandat 464.874 kb on - strandat 464.875 kb on - strandat 464.942 kb on + strandat 464.952 kb on - strandat 464.984 kb on - strandat 465.042 kb on - strandat 465.098 kb on - strandat 465.112 kb on - strandat 465.119 kb on + strandat 465.119 kb on + strandat 465.126 kb on + strandat 465.127 kb on - strandat 465.127 kb on - strandat 465.140 kb on + strandat 465.140 kb on + strandat 465.140 kb on + strandat 465.148 kb on - strandat 465.148 kb on - strandat 465.148 kb on - strandat 465.190 kb on - strandat 465.190 kb on - strandat 465.245 kb on + strand, within B158DRAFT_0463at 465.245 kb on + strand, within B158DRAFT_0463at 465.253 kb on - strand, within B158DRAFT_0463at 465.264 kb on + strand, within B158DRAFT_0463at 465.264 kb on + strand, within B158DRAFT_0463at 465.272 kb on - strand, within B158DRAFT_0463at 465.319 kb on - strand, within B158DRAFT_0463at 465.337 kb on + strand, within B158DRAFT_0463at 465.347 kb on + strand, within B158DRAFT_0463at 465.356 kb on + strand, within B158DRAFT_0463at 465.388 kb on + strandat 465.393 kb on + strand, within B158DRAFT_0463at 465.393 kb on + strand, within B158DRAFT_0463at 465.393 kb on + strand, within B158DRAFT_0463at 465.440 kb on + strand, within B158DRAFT_0463at 465.476 kb on + strand, within B158DRAFT_0463at 465.528 kb on + strand, within B158DRAFT_0463at 465.528 kb on + strand, within B158DRAFT_0463at 465.563 kb on - strand, within B158DRAFT_0463at 465.617 kb on + strand, within B158DRAFT_0463at 465.617 kb on + strand, within B158DRAFT_0463at 465.623 kb on + strand, within B158DRAFT_0463at 465.623 kb on + strand, within B158DRAFT_0463at 465.623 kb on + strand, within B158DRAFT_0463at 465.625 kb on - strand, within B158DRAFT_0463at 465.625 kb on - strand, within B158DRAFT_0463at 465.630 kb on - strand, within B158DRAFT_0463at 465.630 kb on - strand, within B158DRAFT_0463at 465.631 kb on - strand, within B158DRAFT_0463at 465.631 kb on - strand, within B158DRAFT_0463at 465.660 kb on - strand, within B158DRAFT_0463at 465.660 kb on - strand, within B158DRAFT_0463at 465.660 kb on - strand, within B158DRAFT_0463at 465.665 kb on - strand, within B158DRAFT_0463at 465.667 kb on + strand, within B158DRAFT_0463at 465.675 kb on - strand, within B158DRAFT_0463at 465.724 kb on + strand, within B158DRAFT_0463at 465.773 kb on + strand, within B158DRAFT_0463at 465.869 kb on + strand, within B158DRAFT_0463

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 100 mM
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463,013 + +0.4
463,013 + -0.3
463,023 + +0.6
463,038 - -0.4
463,064 - -0.1
463,092 + B158DRAFT_0461 0.13 -0.4
463,092 + B158DRAFT_0461 0.13 +0.1
463,092 + B158DRAFT_0461 0.13 +0.6
463,100 - B158DRAFT_0461 0.13 +0.1
463,100 - B158DRAFT_0461 0.13 -0.9
463,100 - B158DRAFT_0461 0.13 -0.2
463,100 - B158DRAFT_0461 0.13 -0.2
463,157 + B158DRAFT_0461 0.19 -0.9
463,157 + B158DRAFT_0461 0.19 -0.1
463,165 - B158DRAFT_0461 0.20 -2.0
463,172 - B158DRAFT_0461 0.20 -0.1
463,221 + B158DRAFT_0461 0.25 -0.0
463,432 + B158DRAFT_0461 0.46 -0.2
463,432 + B158DRAFT_0461 0.46 +0.4
463,439 + B158DRAFT_0461 0.46 +0.2
463,439 + B158DRAFT_0461 0.46 -0.0
463,455 - B158DRAFT_0461 0.48 -1.6
463,459 + B158DRAFT_0461 0.48 +0.1
463,459 + B158DRAFT_0461 0.48 -0.3
463,459 + B158DRAFT_0461 0.48 -0.2
463,459 + B158DRAFT_0461 0.48 +0.2
463,467 + B158DRAFT_0461 0.49 -0.1
463,467 - B158DRAFT_0461 0.49 +0.1
463,467 - B158DRAFT_0461 0.49 +0.5
463,467 - B158DRAFT_0461 0.49 -0.2
463,467 - B158DRAFT_0461 0.49 +0.3
463,469 + B158DRAFT_0461 0.49 +0.4
463,488 + B158DRAFT_0461 0.51 -0.2
463,508 - B158DRAFT_0461 0.53 +0.2
463,513 - B158DRAFT_0461 0.53 +0.2
463,513 - B158DRAFT_0461 0.53 +0.1
463,554 + B158DRAFT_0461 0.57 -0.5
463,614 - B158DRAFT_0461 0.63 +0.3
463,639 + B158DRAFT_0461 0.66 -0.3
463,708 + B158DRAFT_0461 0.72 +0.1
463,805 + B158DRAFT_0461 0.82 -0.5
463,827 - B158DRAFT_0461 0.84 -0.1
463,829 + B158DRAFT_0461 0.84 -0.2
463,834 - B158DRAFT_0461 0.84 +0.1
463,837 + B158DRAFT_0461 0.85 +0.8
463,837 + B158DRAFT_0461 0.85 -0.3
463,837 - B158DRAFT_0461 0.85 -0.3
463,842 + B158DRAFT_0461 0.85 +0.7
463,842 + B158DRAFT_0461 0.85 +0.2
463,842 + B158DRAFT_0461 0.85 +0.1
463,842 + B158DRAFT_0461 0.85 -0.2
463,842 + B158DRAFT_0461 0.85 +0.1
463,842 + B158DRAFT_0461 0.85 -0.3
463,842 + B158DRAFT_0461 0.85 -0.3
463,842 + B158DRAFT_0461 0.85 -0.4
463,844 - B158DRAFT_0461 0.85 -0.3
463,845 - B158DRAFT_0461 0.86 +0.1
463,845 - B158DRAFT_0461 0.86 -0.2
463,850 - B158DRAFT_0461 0.86 +0.0
463,850 - B158DRAFT_0461 0.86 -0.4
463,850 - B158DRAFT_0461 0.86 +0.7
463,850 - B158DRAFT_0461 0.86 +0.2
463,885 - B158DRAFT_0461 0.89 -0.3
463,901 - +0.2
463,983 + -0.2
463,988 + +0.1
464,107 + B158DRAFT_0462 0.12 -0.3
464,107 + B158DRAFT_0462 0.12 +0.3
464,115 - B158DRAFT_0462 0.13 -0.1
464,115 - B158DRAFT_0462 0.13 -0.6
464,288 + B158DRAFT_0462 0.32 -0.2
464,288 + B158DRAFT_0462 0.32 -0.2
464,302 + B158DRAFT_0462 0.34 +0.3
464,302 - B158DRAFT_0462 0.34 -0.4
464,349 - B158DRAFT_0462 0.39 -0.0
464,360 + B158DRAFT_0462 0.40 +0.1
464,360 + B158DRAFT_0462 0.40 +0.5
464,406 + B158DRAFT_0462 0.45 +0.2
464,425 - B158DRAFT_0462 0.48 +0.3
464,438 + B158DRAFT_0462 0.49 +0.1
464,438 + B158DRAFT_0462 0.49 -0.2
464,438 + B158DRAFT_0462 0.49 -0.0
464,438 + B158DRAFT_0462 0.49 +1.1
464,438 + B158DRAFT_0462 0.49 -0.2
464,438 + B158DRAFT_0462 0.49 -0.6
464,438 + B158DRAFT_0462 0.49 -0.2
464,438 + B158DRAFT_0462 0.49 +0.0
464,438 + B158DRAFT_0462 0.49 -0.1
464,446 - B158DRAFT_0462 0.50 -0.2
464,446 - B158DRAFT_0462 0.50 -1.4
464,446 - B158DRAFT_0462 0.50 +0.0
464,446 - B158DRAFT_0462 0.50 +0.0
464,446 - B158DRAFT_0462 0.50 -0.1
464,446 - B158DRAFT_0462 0.50 -0.4
464,446 - B158DRAFT_0462 0.50 +1.0
464,446 - B158DRAFT_0462 0.50 +0.0
464,446 - B158DRAFT_0462 0.50 +0.1
464,446 - B158DRAFT_0462 0.50 -0.5
464,446 - B158DRAFT_0462 0.50 +0.1
464,446 - B158DRAFT_0462 0.50 -0.3
464,446 - B158DRAFT_0462 0.50 +0.0
464,492 + B158DRAFT_0462 0.55 +0.1
464,500 - B158DRAFT_0462 0.56 -0.7
464,500 - B158DRAFT_0462 0.56 -1.2
464,523 + B158DRAFT_0462 0.58 -0.4
464,523 + B158DRAFT_0462 0.58 -0.5
464,531 - B158DRAFT_0462 0.59 -0.1
464,531 - B158DRAFT_0462 0.59 -0.1
464,531 - B158DRAFT_0462 0.59 +0.0
464,531 - B158DRAFT_0462 0.59 -0.4
464,605 + B158DRAFT_0462 0.68 +0.6
464,666 - B158DRAFT_0462 0.74 -0.2
464,680 - B158DRAFT_0462 0.76 -0.1
464,775 + B158DRAFT_0462 0.86 -0.3
464,775 + B158DRAFT_0462 0.86 +0.3
464,775 + B158DRAFT_0462 0.86 -0.3
464,783 - B158DRAFT_0462 0.87 -0.7
464,783 - B158DRAFT_0462 0.87 -1.2
464,783 - B158DRAFT_0462 0.87 +0.4
464,783 - B158DRAFT_0462 0.87 +0.1
464,783 - B158DRAFT_0462 0.87 -0.6
464,783 - B158DRAFT_0462 0.87 -0.9
464,866 + +0.8
464,866 + -0.1
464,866 + +0.1
464,866 + -0.6
464,874 - +0.0
464,874 - -0.1
464,874 - -0.6
464,874 - -0.1
464,875 - -0.2
464,942 + +0.4
464,952 - -0.1
464,984 - +0.0
465,042 - -0.9
465,098 - +0.6
465,112 - -0.1
465,119 + +0.2
465,119 + +0.4
465,126 + +0.7
465,127 - +0.5
465,127 - +0.3
465,140 + -0.2
465,140 + -0.1
465,140 + -0.4
465,148 - -0.1
465,148 - +0.1
465,148 - +1.1
465,190 - -0.1
465,190 - +0.3
465,245 + B158DRAFT_0463 0.12 -1.2
465,245 + B158DRAFT_0463 0.12 +0.2
465,253 - B158DRAFT_0463 0.12 -0.0
465,264 + B158DRAFT_0463 0.13 +0.1
465,264 + B158DRAFT_0463 0.13 -0.3
465,272 - B158DRAFT_0463 0.13 +0.3
465,319 - B158DRAFT_0463 0.15 -0.5
465,337 + B158DRAFT_0463 0.16 -1.0
465,347 + B158DRAFT_0463 0.16 +0.1
465,356 + B158DRAFT_0463 0.16 +0.3
465,388 + +3.4
465,393 + B158DRAFT_0463 0.18 -0.3
465,393 + B158DRAFT_0463 0.18 -0.2
465,393 + B158DRAFT_0463 0.18 +0.3
465,440 + B158DRAFT_0463 0.20 +0.2
465,476 + B158DRAFT_0463 0.21 -0.1
465,528 + B158DRAFT_0463 0.23 +0.1
465,528 + B158DRAFT_0463 0.23 -0.3
465,563 - B158DRAFT_0463 0.25 -0.5
465,617 + B158DRAFT_0463 0.27 -0.5
465,617 + B158DRAFT_0463 0.27 +0.1
465,623 + B158DRAFT_0463 0.27 -0.5
465,623 + B158DRAFT_0463 0.27 +0.6
465,623 + B158DRAFT_0463 0.27 +0.3
465,625 - B158DRAFT_0463 0.27 -0.3
465,625 - B158DRAFT_0463 0.27 +0.2
465,630 - B158DRAFT_0463 0.28 +0.3
465,630 - B158DRAFT_0463 0.28 +1.6
465,631 - B158DRAFT_0463 0.28 -1.1
465,631 - B158DRAFT_0463 0.28 +0.5
465,660 - B158DRAFT_0463 0.29 -0.0
465,660 - B158DRAFT_0463 0.29 +0.4
465,660 - B158DRAFT_0463 0.29 +0.3
465,665 - B158DRAFT_0463 0.29 -0.3
465,667 + B158DRAFT_0463 0.29 -0.2
465,675 - B158DRAFT_0463 0.29 +0.8
465,724 + B158DRAFT_0463 0.31 -0.2
465,773 + B158DRAFT_0463 0.33 +0.1
465,869 + B158DRAFT_0463 0.37 +0.0

Or see this region's nucleotide sequence