Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2453

Experiment: m.b. Chlorate 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2452 and B158DRAFT_2453 are separated by 141 nucleotidesB158DRAFT_2453 and B158DRAFT_2454 are separated by 20 nucleotides B158DRAFT_2452: B158DRAFT_2452 - Protease II, at 626,029 to 628,182 _2452 B158DRAFT_2453: B158DRAFT_2453 - quinolinate synthetase (EC 2.5.1.72), at 628,324 to 629,385 _2453 B158DRAFT_2454: B158DRAFT_2454 - Predicted methyltransferase, at 629,406 to 630,344 _2454 Position (kb) 628 629 630Strain fitness (log2 ratio) -1 0 1at 627.326 kb on + strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.334 kb on - strand, within B158DRAFT_2452at 627.349 kb on + strand, within B158DRAFT_2452at 627.357 kb on - strand, within B158DRAFT_2452at 627.369 kb on + strand, within B158DRAFT_2452at 627.369 kb on + strand, within B158DRAFT_2452at 627.377 kb on - strand, within B158DRAFT_2452at 627.402 kb on - strand, within B158DRAFT_2452at 627.404 kb on - strand, within B158DRAFT_2452at 627.417 kb on + strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.425 kb on - strand, within B158DRAFT_2452at 627.457 kb on - strand, within B158DRAFT_2452at 627.483 kb on + strand, within B158DRAFT_2452at 627.485 kb on - strand, within B158DRAFT_2452at 627.667 kb on + strand, within B158DRAFT_2452at 627.716 kb on + strand, within B158DRAFT_2452at 627.723 kb on + strand, within B158DRAFT_2452at 627.756 kb on + strand, within B158DRAFT_2452at 627.756 kb on + strand, within B158DRAFT_2452at 627.756 kb on - strand, within B158DRAFT_2452at 627.764 kb on - strand, within B158DRAFT_2452at 627.764 kb on - strand, within B158DRAFT_2452at 627.843 kb on - strand, within B158DRAFT_2452at 627.853 kb on - strand, within B158DRAFT_2452at 627.855 kb on + strand, within B158DRAFT_2452at 627.914 kb on - strand, within B158DRAFT_2452at 627.952 kb on - strand, within B158DRAFT_2452at 627.986 kb on + strandat 627.986 kb on + strandat 627.994 kb on - strandat 628.053 kb on + strandat 628.068 kb on + strandat 628.087 kb on - strandat 628.092 kb on - strandat 628.105 kb on + strandat 628.107 kb on - strandat 628.107 kb on - strandat 628.133 kb on + strandat 628.197 kb on + strandat 628.200 kb on - strandat 628.282 kb on - strandat 629.424 kb on + strandat 629.432 kb on - strandat 629.432 kb on - strandat 629.448 kb on + strandat 629.448 kb on + strandat 629.448 kb on + strandat 629.448 kb on + strandat 629.456 kb on - strandat 629.456 kb on - strandat 629.456 kb on - strandat 629.472 kb on - strandat 629.472 kb on - strandat 629.481 kb on - strandat 629.517 kb on + strand, within B158DRAFT_2454at 629.522 kb on + strand, within B158DRAFT_2454at 629.522 kb on + strand, within B158DRAFT_2454at 629.522 kb on + strand, within B158DRAFT_2454at 629.530 kb on - strand, within B158DRAFT_2454at 629.566 kb on - strand, within B158DRAFT_2454at 629.698 kb on + strand, within B158DRAFT_2454at 629.710 kb on - strand, within B158DRAFT_2454at 629.711 kb on - strand, within B158DRAFT_2454at 629.783 kb on + strand, within B158DRAFT_2454at 629.783 kb on + strand, within B158DRAFT_2454at 629.783 kb on + strand, within B158DRAFT_2454at 629.783 kb on + strand, within B158DRAFT_2454at 629.791 kb on - strand, within B158DRAFT_2454at 629.791 kb on - strand, within B158DRAFT_2454at 629.791 kb on - strand, within B158DRAFT_2454at 629.791 kb on - strand, within B158DRAFT_2454at 629.869 kb on + strand, within B158DRAFT_2454at 629.869 kb on + strand, within B158DRAFT_2454at 629.869 kb on + strand, within B158DRAFT_2454at 629.934 kb on + strand, within B158DRAFT_2454at 629.944 kb on + strand, within B158DRAFT_2454at 629.973 kb on + strand, within B158DRAFT_2454at 629.975 kb on + strand, within B158DRAFT_2454at 630.016 kb on + strand, within B158DRAFT_2454at 630.024 kb on - strand, within B158DRAFT_2454at 630.025 kb on - strand, within B158DRAFT_2454at 630.061 kb on + strand, within B158DRAFT_2454at 630.061 kb on + strand, within B158DRAFT_2454at 630.163 kb on + strand, within B158DRAFT_2454at 630.163 kb on + strand, within B158DRAFT_2454at 630.171 kb on - strand, within B158DRAFT_2454at 630.200 kb on + strand, within B158DRAFT_2454at 630.221 kb on + strand, within B158DRAFT_2454at 630.221 kb on + strand, within B158DRAFT_2454at 630.228 kb on + strand, within B158DRAFT_2454at 630.238 kb on - strand, within B158DRAFT_2454

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM
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627,326 + B158DRAFT_2452 0.60 +0.1
627,334 - B158DRAFT_2452 0.61 -0.7
627,334 - B158DRAFT_2452 0.61 -0.4
627,334 - B158DRAFT_2452 0.61 -0.1
627,334 - B158DRAFT_2452 0.61 +0.4
627,349 + B158DRAFT_2452 0.61 +0.5
627,357 - B158DRAFT_2452 0.62 +0.1
627,369 + B158DRAFT_2452 0.62 -0.4
627,369 + B158DRAFT_2452 0.62 -0.9
627,377 - B158DRAFT_2452 0.63 +0.3
627,402 - B158DRAFT_2452 0.64 -0.9
627,404 - B158DRAFT_2452 0.64 +0.2
627,417 + B158DRAFT_2452 0.64 -0.7
627,425 - B158DRAFT_2452 0.65 -0.3
627,425 - B158DRAFT_2452 0.65 -0.0
627,425 - B158DRAFT_2452 0.65 -1.2
627,425 - B158DRAFT_2452 0.65 -0.3
627,425 - B158DRAFT_2452 0.65 +0.4
627,425 - B158DRAFT_2452 0.65 -0.8
627,457 - B158DRAFT_2452 0.66 -0.8
627,483 + B158DRAFT_2452 0.68 -0.2
627,485 - B158DRAFT_2452 0.68 +0.1
627,667 + B158DRAFT_2452 0.76 -0.8
627,716 + B158DRAFT_2452 0.78 -0.0
627,723 + B158DRAFT_2452 0.79 +0.3
627,756 + B158DRAFT_2452 0.80 -1.0
627,756 + B158DRAFT_2452 0.80 +0.2
627,756 - B158DRAFT_2452 0.80 -0.5
627,764 - B158DRAFT_2452 0.81 +0.3
627,764 - B158DRAFT_2452 0.81 -0.6
627,843 - B158DRAFT_2452 0.84 -0.1
627,853 - B158DRAFT_2452 0.85 -0.6
627,855 + B158DRAFT_2452 0.85 -0.5
627,914 - B158DRAFT_2452 0.88 -1.7
627,952 - B158DRAFT_2452 0.89 -0.0
627,986 + -0.6
627,986 + -0.0
627,994 - -1.1
628,053 + -0.3
628,068 + +0.2
628,087 - -0.5
628,092 - +1.0
628,105 + -0.2
628,107 - -0.6
628,107 - +0.4
628,133 + -0.3
628,197 + +0.1
628,200 - -0.1
628,282 - -0.2
629,424 + -0.5
629,432 - -0.2
629,432 - +0.0
629,448 + +0.0
629,448 + +0.0
629,448 + +0.8
629,448 + -0.2
629,456 - -0.4
629,456 - -0.4
629,456 - -0.3
629,472 - +0.1
629,472 - +0.2
629,481 - -1.2
629,517 + B158DRAFT_2454 0.12 -0.2
629,522 + B158DRAFT_2454 0.12 -0.1
629,522 + B158DRAFT_2454 0.12 -0.4
629,522 + B158DRAFT_2454 0.12 -0.2
629,530 - B158DRAFT_2454 0.13 +0.1
629,566 - B158DRAFT_2454 0.17 -0.2
629,698 + B158DRAFT_2454 0.31 -0.1
629,710 - B158DRAFT_2454 0.32 +0.3
629,711 - B158DRAFT_2454 0.32 -0.0
629,783 + B158DRAFT_2454 0.40 -0.8
629,783 + B158DRAFT_2454 0.40 +0.2
629,783 + B158DRAFT_2454 0.40 -0.6
629,783 + B158DRAFT_2454 0.40 -0.2
629,791 - B158DRAFT_2454 0.41 +0.1
629,791 - B158DRAFT_2454 0.41 -0.7
629,791 - B158DRAFT_2454 0.41 -0.1
629,791 - B158DRAFT_2454 0.41 +0.1
629,869 + B158DRAFT_2454 0.49 -0.6
629,869 + B158DRAFT_2454 0.49 -0.4
629,869 + B158DRAFT_2454 0.49 -1.0
629,934 + B158DRAFT_2454 0.56 -0.3
629,944 + B158DRAFT_2454 0.57 +0.0
629,973 + B158DRAFT_2454 0.60 -0.4
629,975 + B158DRAFT_2454 0.61 +0.5
630,016 + B158DRAFT_2454 0.65 -0.1
630,024 - B158DRAFT_2454 0.66 -0.2
630,025 - B158DRAFT_2454 0.66 +0.1
630,061 + B158DRAFT_2454 0.70 +0.1
630,061 + B158DRAFT_2454 0.70 -0.0
630,163 + B158DRAFT_2454 0.81 -0.4
630,163 + B158DRAFT_2454 0.81 +0.4
630,171 - B158DRAFT_2454 0.81 -0.1
630,200 + B158DRAFT_2454 0.85 -0.1
630,221 + B158DRAFT_2454 0.87 +0.3
630,221 + B158DRAFT_2454 0.87 +0.4
630,228 + B158DRAFT_2454 0.88 +0.0
630,238 - B158DRAFT_2454 0.89 -0.3

Or see this region's nucleotide sequence