Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2182

Experiment: m.b. Chlorate 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2181 and B158DRAFT_2182 are separated by 149 nucleotidesB158DRAFT_2182 and B158DRAFT_2183 are separated by 154 nucleotides B158DRAFT_2181: B158DRAFT_2181 - Negative regulator of sigma E activity, at 328,361 to 329,041 _2181 B158DRAFT_2182: B158DRAFT_2182 - positive regulator of sigma(E), RseC/MucC, at 329,191 to 329,682 _2182 B158DRAFT_2183: B158DRAFT_2183 - periplasmic serine protease, Do/DeqQ family, at 329,837 to 331,138 _2183 Position (kb) 329 330Strain fitness (log2 ratio) -2 -1 0 1at 328.593 kb on + strand, within B158DRAFT_2181at 328.629 kb on + strand, within B158DRAFT_2181at 328.637 kb on - strand, within B158DRAFT_2181at 328.637 kb on - strand, within B158DRAFT_2181at 328.644 kb on + strand, within B158DRAFT_2181at 328.644 kb on + strand, within B158DRAFT_2181at 328.765 kb on + strand, within B158DRAFT_2181at 328.947 kb on - strand, within B158DRAFT_2181at 328.981 kb on + strandat 329.083 kb on + strandat 329.201 kb on + strandat 329.561 kb on + strand, within B158DRAFT_2182at 329.596 kb on + strand, within B158DRAFT_2182at 329.671 kb on + strandat 329.691 kb on - strandat 329.839 kb on - strandat 329.864 kb on + strandat 329.967 kb on - strandat 329.980 kb on + strand, within B158DRAFT_2183at 329.988 kb on - strand, within B158DRAFT_2183at 329.988 kb on - strand, within B158DRAFT_2183at 329.988 kb on - strand, within B158DRAFT_2183at 330.011 kb on - strand, within B158DRAFT_2183at 330.016 kb on + strand, within B158DRAFT_2183at 330.031 kb on - strand, within B158DRAFT_2183at 330.031 kb on - strand, within B158DRAFT_2183at 330.032 kb on - strand, within B158DRAFT_2183at 330.099 kb on + strand, within B158DRAFT_2183at 330.107 kb on - strand, within B158DRAFT_2183at 330.124 kb on + strand, within B158DRAFT_2183at 330.124 kb on + strand, within B158DRAFT_2183at 330.132 kb on - strand, within B158DRAFT_2183at 330.132 kb on - strand, within B158DRAFT_2183at 330.137 kb on - strand, within B158DRAFT_2183at 330.144 kb on - strand, within B158DRAFT_2183at 330.147 kb on + strand, within B158DRAFT_2183at 330.162 kb on + strand, within B158DRAFT_2183at 330.207 kb on + strand, within B158DRAFT_2183at 330.207 kb on + strand, within B158DRAFT_2183at 330.231 kb on + strand, within B158DRAFT_2183at 330.304 kb on + strand, within B158DRAFT_2183at 330.307 kb on - strand, within B158DRAFT_2183at 330.309 kb on + strand, within B158DRAFT_2183at 330.317 kb on - strand, within B158DRAFT_2183at 330.317 kb on - strand, within B158DRAFT_2183at 330.317 kb on - strand, within B158DRAFT_2183at 330.317 kb on - strand, within B158DRAFT_2183at 330.393 kb on - strand, within B158DRAFT_2183at 330.395 kb on + strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.413 kb on - strand, within B158DRAFT_2183at 330.532 kb on + strand, within B158DRAFT_2183at 330.546 kb on + strand, within B158DRAFT_2183at 330.555 kb on - strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.572 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.577 kb on + strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.580 kb on - strand, within B158DRAFT_2183at 330.585 kb on - strand, within B158DRAFT_2183at 330.590 kb on - strand, within B158DRAFT_2183at 330.635 kb on - strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.662 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.663 kb on + strand, within B158DRAFT_2183at 330.670 kb on + strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183at 330.671 kb on - strand, within B158DRAFT_2183

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM
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328,593 + B158DRAFT_2181 0.34 -0.8
328,629 + B158DRAFT_2181 0.39 -0.3
328,637 - B158DRAFT_2181 0.41 -0.2
328,637 - B158DRAFT_2181 0.41 -0.5
328,644 + B158DRAFT_2181 0.42 -0.1
328,644 + B158DRAFT_2181 0.42 -0.3
328,765 + B158DRAFT_2181 0.59 -2.4
328,947 - B158DRAFT_2181 0.86 +0.6
328,981 + -0.4
329,083 + -0.2
329,201 + -0.1
329,561 + B158DRAFT_2182 0.75 -2.7
329,596 + B158DRAFT_2182 0.82 -1.5
329,671 + +0.0
329,691 - -0.4
329,839 - +0.1
329,864 + +0.1
329,967 - +0.1
329,980 + B158DRAFT_2183 0.11 +0.1
329,988 - B158DRAFT_2183 0.12 +0.3
329,988 - B158DRAFT_2183 0.12 -1.6
329,988 - B158DRAFT_2183 0.12 +0.1
330,011 - B158DRAFT_2183 0.13 +0.2
330,016 + B158DRAFT_2183 0.14 +0.3
330,031 - B158DRAFT_2183 0.15 -0.1
330,031 - B158DRAFT_2183 0.15 -0.7
330,032 - B158DRAFT_2183 0.15 +0.3
330,099 + B158DRAFT_2183 0.20 +0.6
330,107 - B158DRAFT_2183 0.21 -0.5
330,124 + B158DRAFT_2183 0.22 +0.1
330,124 + B158DRAFT_2183 0.22 -0.2
330,132 - B158DRAFT_2183 0.23 +0.4
330,132 - B158DRAFT_2183 0.23 -0.3
330,137 - B158DRAFT_2183 0.23 -2.7
330,144 - B158DRAFT_2183 0.24 -0.4
330,147 + B158DRAFT_2183 0.24 -0.1
330,162 + B158DRAFT_2183 0.25 -0.2
330,207 + B158DRAFT_2183 0.28 +0.2
330,207 + B158DRAFT_2183 0.28 -0.3
330,231 + B158DRAFT_2183 0.30 -0.2
330,304 + B158DRAFT_2183 0.36 -0.1
330,307 - B158DRAFT_2183 0.36 -0.1
330,309 + B158DRAFT_2183 0.36 -0.7
330,317 - B158DRAFT_2183 0.37 +0.1
330,317 - B158DRAFT_2183 0.37 +0.1
330,317 - B158DRAFT_2183 0.37 +0.2
330,317 - B158DRAFT_2183 0.37 -0.4
330,393 - B158DRAFT_2183 0.43 -0.9
330,395 + B158DRAFT_2183 0.43 +0.2
330,413 - B158DRAFT_2183 0.44 +0.1
330,413 - B158DRAFT_2183 0.44 +0.1
330,532 + B158DRAFT_2183 0.53 -0.2
330,546 + B158DRAFT_2183 0.54 +0.1
330,555 - B158DRAFT_2183 0.55 -0.6
330,572 + B158DRAFT_2183 0.56 +0.2
330,572 + B158DRAFT_2183 0.56 +0.1
330,572 + B158DRAFT_2183 0.56 -0.9
330,577 + B158DRAFT_2183 0.57 -1.2
330,577 + B158DRAFT_2183 0.57 -0.3
330,577 + B158DRAFT_2183 0.57 -0.1
330,577 + B158DRAFT_2183 0.57 +0.2
330,580 - B158DRAFT_2183 0.57 -0.2
330,580 - B158DRAFT_2183 0.57 +0.2
330,580 - B158DRAFT_2183 0.57 +0.0
330,580 - B158DRAFT_2183 0.57 -0.6
330,585 - B158DRAFT_2183 0.57 -0.4
330,590 - B158DRAFT_2183 0.58 +0.2
330,635 - B158DRAFT_2183 0.61 +0.9
330,662 + B158DRAFT_2183 0.63 -0.5
330,662 + B158DRAFT_2183 0.63 +0.4
330,663 + B158DRAFT_2183 0.63 -0.2
330,663 + B158DRAFT_2183 0.63 -0.2
330,670 + B158DRAFT_2183 0.64 -0.5
330,671 - B158DRAFT_2183 0.64 -0.1
330,671 - B158DRAFT_2183 0.64 +0.0
330,671 - B158DRAFT_2183 0.64 +0.2

Or see this region's nucleotide sequence