Experiment: m.b. Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2080 and B158DRAFT_2081 are separated by 206 nucleotides B158DRAFT_2081 and B158DRAFT_2082 overlap by 4 nucleotides B158DRAFT_2082 and B158DRAFT_2083 overlap by 4 nucleotides
B158DRAFT_2080: B158DRAFT_2080 - RNA polymerase, sigma 54 subunit, RpoN/SigL, at 219,130 to 220,602
_2080
B158DRAFT_2081: B158DRAFT_2081 - ABC-type (unclassified) transport system, ATPase component, at 220,809 to 221,534
_2081
B158DRAFT_2082: B158DRAFT_2082 - Uncharacterized protein conserved in bacteria, at 221,531 to 222,292
_2082
B158DRAFT_2083: B158DRAFT_2083 - Uncharacterized protein conserved in bacteria, at 222,289 to 222,846
_2083
Position (kb) 220
221
222 Strain fitness (log2 ratio) -2
-1
0
1 at 220.195 kb on - strand, within B158DRAFT_2080 at 220.212 kb on - strand, within B158DRAFT_2080 at 220.314 kb on - strand, within B158DRAFT_2080 at 220.317 kb on + strand, within B158DRAFT_2080 at 220.434 kb on + strand, within B158DRAFT_2080 at 220.434 kb on + strand, within B158DRAFT_2080 at 220.434 kb on + strand, within B158DRAFT_2080 at 220.434 kb on + strand, within B158DRAFT_2080 at 220.434 kb on + strand, within B158DRAFT_2080 at 220.442 kb on - strand, within B158DRAFT_2080 at 220.442 kb on - strand, within B158DRAFT_2080 at 220.510 kb on - strand at 220.542 kb on + strand at 220.661 kb on + strand at 220.765 kb on + strand at 220.773 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM remove 220,195 - B158DRAFT_2080 0.72 +0.3 220,212 - B158DRAFT_2080 0.73 +0.0 220,314 - B158DRAFT_2080 0.80 -0.1 220,317 + B158DRAFT_2080 0.81 +0.2 220,434 + B158DRAFT_2080 0.89 -0.1 220,434 + B158DRAFT_2080 0.89 -0.0 220,434 + B158DRAFT_2080 0.89 +0.1 220,434 + B158DRAFT_2080 0.89 +0.7 220,434 + B158DRAFT_2080 0.89 -0.4 220,442 - B158DRAFT_2080 0.89 +0.0 220,442 - B158DRAFT_2080 0.89 -0.1 220,510 - -0.2 220,542 + -0.1 220,661 + -0.5 220,765 + +0.1 220,773 - -2.4
Or see this region's nucleotide sequence