Experiment: m.b. Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1585 and B158DRAFT_1586 are separated by 33 nucleotides B158DRAFT_1586 and B158DRAFT_1587 are separated by 75 nucleotides B158DRAFT_1587 and B158DRAFT_1588 are separated by 157 nucleotides
B158DRAFT_1585: B158DRAFT_1585 - Beta-glucosidase-related glycosidases, at 1,647,130 to 1,648,140
_1585
B158DRAFT_1586: B158DRAFT_1586 - Uncharacterized conserved small protein, at 1,648,174 to 1,648,530
_1586
B158DRAFT_1587: B158DRAFT_1587 - hypothetical protein, at 1,648,606 to 1,648,896
_1587
B158DRAFT_1588: B158DRAFT_1588 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 1,649,054 to 1,650,298
_1588
Position (kb)
1648
1649 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1647.615 kb on + strand, within B158DRAFT_1585 at 1647.647 kb on + strand, within B158DRAFT_1585 at 1647.655 kb on - strand, within B158DRAFT_1585 at 1647.655 kb on - strand, within B158DRAFT_1585 at 1647.718 kb on + strand, within B158DRAFT_1585 at 1647.750 kb on - strand at 1647.772 kb on + strand, within B158DRAFT_1585 at 1647.772 kb on + strand, within B158DRAFT_1585 at 1647.780 kb on - strand, within B158DRAFT_1585 at 1647.857 kb on - strand, within B158DRAFT_1585 at 1647.896 kb on + strand, within B158DRAFT_1585 at 1647.896 kb on + strand, within B158DRAFT_1585 at 1647.904 kb on - strand, within B158DRAFT_1585 at 1647.922 kb on - strand, within B158DRAFT_1585 at 1647.922 kb on - strand, within B158DRAFT_1585 at 1647.966 kb on + strand, within B158DRAFT_1585 at 1647.978 kb on + strand, within B158DRAFT_1585 at 1647.986 kb on - strand, within B158DRAFT_1585 at 1647.986 kb on - strand, within B158DRAFT_1585 at 1648.026 kb on + strand, within B158DRAFT_1585 at 1648.034 kb on - strand, within B158DRAFT_1585 at 1648.066 kb on + strand at 1648.066 kb on + strand at 1648.066 kb on + strand at 1648.071 kb on + strand at 1648.074 kb on - strand at 1648.079 kb on - strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.097 kb on + strand at 1648.098 kb on - strand at 1648.098 kb on - strand at 1648.109 kb on + strand at 1648.109 kb on + strand at 1648.109 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.172 kb on + strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.190 kb on + strand at 1648.190 kb on + strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.208 kb on - strand at 1648.244 kb on - strand, within B158DRAFT_1586 at 1648.282 kb on + strand, within B158DRAFT_1586 at 1648.290 kb on - strand, within B158DRAFT_1586 at 1648.300 kb on + strand, within B158DRAFT_1586 at 1648.300 kb on + strand, within B158DRAFT_1586 at 1648.349 kb on + strand, within B158DRAFT_1586 at 1648.349 kb on + strand, within B158DRAFT_1586 at 1648.357 kb on - strand, within B158DRAFT_1586 at 1648.357 kb on - strand, within B158DRAFT_1586 at 1648.359 kb on + strand, within B158DRAFT_1586 at 1648.416 kb on - strand, within B158DRAFT_1586 at 1648.487 kb on + strand, within B158DRAFT_1586 at 1648.487 kb on + strand, within B158DRAFT_1586 at 1648.490 kb on - strand, within B158DRAFT_1586 at 1648.495 kb on - strand at 1648.495 kb on - strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.601 kb on - strand at 1648.603 kb on + strand at 1648.606 kb on - strand at 1648.662 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.771 kb on - strand, within B158DRAFT_1587 at 1648.873 kb on + strand at 1648.881 kb on - strand at 1648.882 kb on + strand at 1648.889 kb on + strand at 1648.889 kb on + strand at 1648.897 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM remove 1,647,615 + B158DRAFT_1585 0.48 -1.6 1,647,647 + B158DRAFT_1585 0.51 -3.1 1,647,655 - B158DRAFT_1585 0.52 -1.0 1,647,655 - B158DRAFT_1585 0.52 -3.8 1,647,718 + B158DRAFT_1585 0.58 -2.6 1,647,750 - -0.3 1,647,772 + B158DRAFT_1585 0.64 -1.5 1,647,772 + B158DRAFT_1585 0.64 -2.4 1,647,780 - B158DRAFT_1585 0.64 -0.6 1,647,857 - B158DRAFT_1585 0.72 -2.3 1,647,896 + B158DRAFT_1585 0.76 -2.1 1,647,896 + B158DRAFT_1585 0.76 -2.9 1,647,904 - B158DRAFT_1585 0.77 -3.0 1,647,922 - B158DRAFT_1585 0.78 -1.4 1,647,922 - B158DRAFT_1585 0.78 +0.4 1,647,966 + B158DRAFT_1585 0.83 -2.5 1,647,978 + B158DRAFT_1585 0.84 -3.2 1,647,986 - B158DRAFT_1585 0.85 -2.0 1,647,986 - B158DRAFT_1585 0.85 -3.2 1,648,026 + B158DRAFT_1585 0.89 -4.0 1,648,034 - B158DRAFT_1585 0.89 -0.9 1,648,066 + -2.1 1,648,066 + -3.0 1,648,066 + -3.1 1,648,071 + -1.8 1,648,074 - -0.6 1,648,079 - -1.8 1,648,090 + -2.7 1,648,090 + -2.3 1,648,090 + -1.8 1,648,090 + -1.3 1,648,097 + -0.9 1,648,098 - -4.3 1,648,098 - -2.0 1,648,109 + -0.9 1,648,109 + -1.5 1,648,109 + -0.2 1,648,166 + -0.1 1,648,166 + +0.4 1,648,166 + +0.1 1,648,166 + +0.5 1,648,172 + +0.0 1,648,174 - -0.0 1,648,174 - -1.2 1,648,174 - -0.6 1,648,174 - -0.0 1,648,174 - +0.4 1,648,190 + +0.1 1,648,190 + -0.2 1,648,198 - -0.5 1,648,198 - +0.2 1,648,198 - -1.8 1,648,198 - +0.5 1,648,198 - -0.5 1,648,208 - +0.1 1,648,244 - B158DRAFT_1586 0.20 -0.3 1,648,282 + B158DRAFT_1586 0.30 +0.4 1,648,290 - B158DRAFT_1586 0.32 -0.3 1,648,300 + B158DRAFT_1586 0.35 -0.0 1,648,300 + B158DRAFT_1586 0.35 +0.2 1,648,349 + B158DRAFT_1586 0.49 +0.2 1,648,349 + B158DRAFT_1586 0.49 -0.1 1,648,357 - B158DRAFT_1586 0.51 -0.2 1,648,357 - B158DRAFT_1586 0.51 +0.1 1,648,359 + B158DRAFT_1586 0.52 +0.2 1,648,416 - B158DRAFT_1586 0.68 +0.2 1,648,487 + B158DRAFT_1586 0.88 -0.3 1,648,487 + B158DRAFT_1586 0.88 -0.2 1,648,490 - B158DRAFT_1586 0.89 -0.2 1,648,495 - -0.5 1,648,495 - -0.3 1,648,593 + +0.0 1,648,593 + +0.0 1,648,593 + +0.4 1,648,593 + +0.7 1,648,593 + -0.2 1,648,601 - -0.2 1,648,603 + -0.5 1,648,606 - +0.0 1,648,662 + B158DRAFT_1587 0.19 -0.5 1,648,705 + B158DRAFT_1587 0.34 -0.7 1,648,705 + B158DRAFT_1587 0.34 -0.4 1,648,705 + B158DRAFT_1587 0.34 -0.4 1,648,705 + B158DRAFT_1587 0.34 +0.6 1,648,705 + B158DRAFT_1587 0.34 -0.5 1,648,705 + B158DRAFT_1587 0.34 -0.2 1,648,713 - B158DRAFT_1587 0.37 -0.2 1,648,713 - B158DRAFT_1587 0.37 -0.2 1,648,713 - B158DRAFT_1587 0.37 -0.4 1,648,713 - B158DRAFT_1587 0.37 +0.5 1,648,771 - B158DRAFT_1587 0.57 -0.5 1,648,873 + +0.2 1,648,881 - -0.3 1,648,882 + +0.6 1,648,889 + +0.3 1,648,889 + -0.5 1,648,897 - +1.1
Or see this region's nucleotide sequence