Experiment: m.b. Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1187 and B158DRAFT_1188 are separated by 34 nucleotides B158DRAFT_1188 and B158DRAFT_1189 are separated by 95 nucleotides B158DRAFT_1189 and B158DRAFT_1190 are separated by 193 nucleotides
B158DRAFT_1187: B158DRAFT_1187 - DNA-directed RNA polymerase specialized sigma subunit, at 1,225,678 to 1,226,307
_1187
B158DRAFT_1188: B158DRAFT_1188 - Protein of unknown function (DUF3307)., at 1,226,342 to 1,227,082
_1188
B158DRAFT_1189: B158DRAFT_1189 - hypothetical protein, at 1,227,178 to 1,228,029
_1189
B158DRAFT_1190: B158DRAFT_1190 - hypothetical protein, at 1,228,223 to 1,230,346
_1190
Position (kb)
1227
1228
1229 Strain fitness (log2 ratio)
-1
0
1 at 1226.204 kb on + strand, within B158DRAFT_1187 at 1226.346 kb on - strand at 1226.346 kb on - strand at 1226.412 kb on + strand at 1226.471 kb on + strand, within B158DRAFT_1188 at 1226.482 kb on + strand, within B158DRAFT_1188 at 1226.482 kb on + strand, within B158DRAFT_1188 at 1226.490 kb on - strand, within B158DRAFT_1188 at 1226.490 kb on - strand, within B158DRAFT_1188 at 1226.572 kb on + strand, within B158DRAFT_1188 at 1226.572 kb on + strand, within B158DRAFT_1188 at 1226.587 kb on - strand, within B158DRAFT_1188 at 1226.591 kb on + strand, within B158DRAFT_1188 at 1226.710 kb on - strand, within B158DRAFT_1188 at 1226.897 kb on + strand, within B158DRAFT_1188 at 1226.933 kb on - strand, within B158DRAFT_1188 at 1227.028 kb on - strand at 1227.038 kb on - strand at 1227.058 kb on + strand at 1227.061 kb on - strand at 1227.061 kb on - strand at 1227.061 kb on - strand at 1227.066 kb on - strand at 1227.066 kb on - strand at 1227.094 kb on - strand at 1227.113 kb on + strand at 1227.125 kb on + strand at 1227.125 kb on + strand at 1227.125 kb on + strand at 1227.125 kb on + strand at 1227.125 kb on + strand at 1227.133 kb on - strand at 1227.133 kb on - strand at 1227.133 kb on - strand at 1227.135 kb on - strand at 1227.138 kb on + strand at 1227.317 kb on + strand, within B158DRAFT_1189 at 1227.317 kb on + strand, within B158DRAFT_1189 at 1227.325 kb on - strand, within B158DRAFT_1189 at 1227.325 kb on - strand, within B158DRAFT_1189 at 1227.386 kb on + strand, within B158DRAFT_1189 at 1227.389 kb on + strand, within B158DRAFT_1189 at 1227.399 kb on + strand, within B158DRAFT_1189 at 1227.399 kb on + strand, within B158DRAFT_1189 at 1227.399 kb on + strand, within B158DRAFT_1189 at 1227.399 kb on + strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.407 kb on - strand, within B158DRAFT_1189 at 1227.410 kb on - strand, within B158DRAFT_1189 at 1227.439 kb on + strand, within B158DRAFT_1189 at 1227.447 kb on + strand, within B158DRAFT_1189 at 1227.464 kb on + strand, within B158DRAFT_1189 at 1227.518 kb on + strand, within B158DRAFT_1189 at 1227.526 kb on - strand, within B158DRAFT_1189 at 1227.580 kb on - strand, within B158DRAFT_1189 at 1227.609 kb on + strand, within B158DRAFT_1189 at 1227.644 kb on + strand, within B158DRAFT_1189 at 1227.654 kb on + strand, within B158DRAFT_1189 at 1227.662 kb on - strand, within B158DRAFT_1189 at 1227.687 kb on + strand, within B158DRAFT_1189 at 1227.755 kb on - strand, within B158DRAFT_1189 at 1227.878 kb on - strand, within B158DRAFT_1189 at 1227.894 kb on + strand, within B158DRAFT_1189 at 1227.894 kb on + strand, within B158DRAFT_1189 at 1227.897 kb on + strand, within B158DRAFT_1189 at 1227.926 kb on + strand, within B158DRAFT_1189 at 1227.926 kb on + strand, within B158DRAFT_1189 at 1227.926 kb on + strand, within B158DRAFT_1189 at 1227.926 kb on + strand, within B158DRAFT_1189 at 1227.934 kb on - strand, within B158DRAFT_1189 at 1227.934 kb on - strand, within B158DRAFT_1189 at 1228.136 kb on + strand at 1228.136 kb on + strand at 1228.144 kb on - strand at 1228.144 kb on - strand at 1228.144 kb on - strand at 1228.144 kb on - strand at 1228.187 kb on + strand at 1228.187 kb on + strand at 1228.187 kb on + strand at 1228.187 kb on + strand at 1228.187 kb on + strand at 1228.195 kb on - strand at 1228.195 kb on - strand at 1228.195 kb on - strand at 1228.202 kb on + strand at 1228.202 kb on + strand at 1228.202 kb on + strand at 1228.202 kb on + strand at 1228.202 kb on + strand at 1228.202 kb on + strand at 1228.210 kb on - strand at 1228.210 kb on - strand at 1228.210 kb on - strand at 1228.286 kb on + strand at 1228.302 kb on + strand at 1228.345 kb on - strand at 1228.355 kb on + strand at 1228.355 kb on + strand at 1228.355 kb on + strand at 1228.365 kb on + strand at 1228.405 kb on + strand at 1228.413 kb on - strand at 1228.425 kb on - strand at 1228.425 kb on - strand at 1228.425 kb on - strand at 1228.552 kb on + strand, within B158DRAFT_1190 at 1228.555 kb on + strand, within B158DRAFT_1190 at 1228.555 kb on + strand, within B158DRAFT_1190 at 1228.563 kb on - strand, within B158DRAFT_1190 at 1228.623 kb on + strand, within B158DRAFT_1190 at 1228.631 kb on - strand, within B158DRAFT_1190 at 1228.631 kb on - strand, within B158DRAFT_1190 at 1228.655 kb on + strand, within B158DRAFT_1190 at 1228.729 kb on + strand, within B158DRAFT_1190 at 1228.750 kb on + strand, within B158DRAFT_1190 at 1228.788 kb on - strand, within B158DRAFT_1190 at 1228.819 kb on - strand, within B158DRAFT_1190 at 1228.837 kb on + strand, within B158DRAFT_1190 at 1228.844 kb on + strand, within B158DRAFT_1190 at 1228.844 kb on + strand, within B158DRAFT_1190 at 1228.852 kb on - strand, within B158DRAFT_1190 at 1228.852 kb on - strand, within B158DRAFT_1190 at 1228.854 kb on + strand, within B158DRAFT_1190 at 1228.889 kb on + strand, within B158DRAFT_1190 at 1228.889 kb on + strand, within B158DRAFT_1190 at 1228.933 kb on + strand, within B158DRAFT_1190 at 1228.933 kb on + strand, within B158DRAFT_1190 at 1228.941 kb on - strand, within B158DRAFT_1190 at 1229.004 kb on - strand, within B158DRAFT_1190 at 1229.005 kb on + strand, within B158DRAFT_1190 at 1229.010 kb on + strand, within B158DRAFT_1190 at 1229.018 kb on - strand, within B158DRAFT_1190 at 1229.018 kb on - strand, within B158DRAFT_1190 at 1229.018 kb on - strand, within B158DRAFT_1190 at 1229.028 kb on - strand, within B158DRAFT_1190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM remove 1,226,204 + B158DRAFT_1187 0.83 +0.3 1,226,346 - +0.1 1,226,346 - -1.2 1,226,412 + -0.6 1,226,471 + B158DRAFT_1188 0.17 -0.1 1,226,482 + B158DRAFT_1188 0.19 -0.3 1,226,482 + B158DRAFT_1188 0.19 -0.2 1,226,490 - B158DRAFT_1188 0.20 +0.4 1,226,490 - B158DRAFT_1188 0.20 -0.3 1,226,572 + B158DRAFT_1188 0.31 +0.3 1,226,572 + B158DRAFT_1188 0.31 -0.1 1,226,587 - B158DRAFT_1188 0.33 -0.0 1,226,591 + B158DRAFT_1188 0.34 +0.4 1,226,710 - B158DRAFT_1188 0.50 +0.1 1,226,897 + B158DRAFT_1188 0.75 +0.2 1,226,933 - B158DRAFT_1188 0.80 -0.3 1,227,028 - -0.5 1,227,038 - -0.2 1,227,058 + -0.4 1,227,061 - -0.3 1,227,061 - -0.9 1,227,061 - -0.8 1,227,066 - +0.9 1,227,066 - -0.5 1,227,094 - +0.0 1,227,113 + -0.3 1,227,125 + +0.2 1,227,125 + +0.1 1,227,125 + +0.1 1,227,125 + +1.2 1,227,125 + -0.6 1,227,133 - +0.2 1,227,133 - -0.1 1,227,133 - -0.2 1,227,135 - -0.0 1,227,138 + -0.1 1,227,317 + B158DRAFT_1189 0.16 +0.2 1,227,317 + B158DRAFT_1189 0.16 -0.5 1,227,325 - B158DRAFT_1189 0.17 +0.3 1,227,325 - B158DRAFT_1189 0.17 -0.0 1,227,386 + B158DRAFT_1189 0.24 +0.1 1,227,389 + B158DRAFT_1189 0.25 -0.3 1,227,399 + B158DRAFT_1189 0.26 -0.3 1,227,399 + B158DRAFT_1189 0.26 +0.2 1,227,399 + B158DRAFT_1189 0.26 -0.0 1,227,399 + B158DRAFT_1189 0.26 -0.3 1,227,407 - B158DRAFT_1189 0.27 +0.1 1,227,407 - B158DRAFT_1189 0.27 -0.6 1,227,407 - B158DRAFT_1189 0.27 -0.1 1,227,407 - B158DRAFT_1189 0.27 -0.4 1,227,407 - B158DRAFT_1189 0.27 -0.2 1,227,407 - B158DRAFT_1189 0.27 -0.2 1,227,410 - B158DRAFT_1189 0.27 -0.5 1,227,439 + B158DRAFT_1189 0.31 +0.5 1,227,447 + B158DRAFT_1189 0.32 -0.0 1,227,464 + B158DRAFT_1189 0.34 +0.3 1,227,518 + B158DRAFT_1189 0.40 +0.0 1,227,526 - B158DRAFT_1189 0.41 +0.5 1,227,580 - B158DRAFT_1189 0.47 +0.0 1,227,609 + B158DRAFT_1189 0.51 -0.3 1,227,644 + B158DRAFT_1189 0.55 +0.8 1,227,654 + B158DRAFT_1189 0.56 -0.2 1,227,662 - B158DRAFT_1189 0.57 -0.8 1,227,687 + B158DRAFT_1189 0.60 +0.3 1,227,755 - B158DRAFT_1189 0.68 -0.1 1,227,878 - B158DRAFT_1189 0.82 -0.8 1,227,894 + B158DRAFT_1189 0.84 -0.6 1,227,894 + B158DRAFT_1189 0.84 +0.5 1,227,897 + B158DRAFT_1189 0.84 -0.3 1,227,926 + B158DRAFT_1189 0.88 +0.1 1,227,926 + B158DRAFT_1189 0.88 +0.2 1,227,926 + B158DRAFT_1189 0.88 -0.2 1,227,926 + B158DRAFT_1189 0.88 -0.5 1,227,934 - B158DRAFT_1189 0.89 +0.7 1,227,934 - B158DRAFT_1189 0.89 -0.2 1,228,136 + -0.4 1,228,136 + +0.2 1,228,144 - -0.1 1,228,144 - +0.2 1,228,144 - -0.1 1,228,144 - -0.1 1,228,187 + -0.3 1,228,187 + -0.2 1,228,187 + -0.0 1,228,187 + -0.2 1,228,187 + -0.5 1,228,195 - -1.1 1,228,195 - -0.4 1,228,195 - +0.8 1,228,202 + -0.3 1,228,202 + -0.1 1,228,202 + +0.1 1,228,202 + -1.1 1,228,202 + -0.2 1,228,202 + +0.6 1,228,210 - -0.3 1,228,210 - +0.1 1,228,210 - +0.3 1,228,286 + +0.7 1,228,302 + +0.1 1,228,345 - +0.4 1,228,355 + -0.2 1,228,355 + -0.1 1,228,355 + -0.4 1,228,365 + +0.7 1,228,405 + +0.2 1,228,413 - -0.6 1,228,425 - +0.2 1,228,425 - -0.5 1,228,425 - -0.3 1,228,552 + B158DRAFT_1190 0.15 +0.1 1,228,555 + B158DRAFT_1190 0.16 -0.2 1,228,555 + B158DRAFT_1190 0.16 -0.2 1,228,563 - B158DRAFT_1190 0.16 -0.3 1,228,623 + B158DRAFT_1190 0.19 -0.2 1,228,631 - B158DRAFT_1190 0.19 +0.0 1,228,631 - B158DRAFT_1190 0.19 +0.3 1,228,655 + B158DRAFT_1190 0.20 +0.1 1,228,729 + B158DRAFT_1190 0.24 -0.5 1,228,750 + B158DRAFT_1190 0.25 -0.8 1,228,788 - B158DRAFT_1190 0.27 -1.2 1,228,819 - B158DRAFT_1190 0.28 +0.1 1,228,837 + B158DRAFT_1190 0.29 -0.7 1,228,844 + B158DRAFT_1190 0.29 +0.0 1,228,844 + B158DRAFT_1190 0.29 -0.4 1,228,852 - B158DRAFT_1190 0.30 +0.2 1,228,852 - B158DRAFT_1190 0.30 +0.1 1,228,854 + B158DRAFT_1190 0.30 +0.0 1,228,889 + B158DRAFT_1190 0.31 +0.5 1,228,889 + B158DRAFT_1190 0.31 -0.8 1,228,933 + B158DRAFT_1190 0.33 +0.3 1,228,933 + B158DRAFT_1190 0.33 +0.1 1,228,941 - B158DRAFT_1190 0.34 -0.1 1,229,004 - B158DRAFT_1190 0.37 -0.3 1,229,005 + B158DRAFT_1190 0.37 -0.3 1,229,010 + B158DRAFT_1190 0.37 +0.2 1,229,018 - B158DRAFT_1190 0.37 +0.0 1,229,018 - B158DRAFT_1190 0.37 -0.4 1,229,018 - B158DRAFT_1190 0.37 +0.1 1,229,028 - B158DRAFT_1190 0.38 +0.1
Or see this region's nucleotide sequence