Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0787

Experiment: m.b. Chlorate 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0785 and B158DRAFT_0786 are separated by 21 nucleotidesB158DRAFT_0786 and B158DRAFT_0787 are separated by 137 nucleotidesB158DRAFT_0787 and B158DRAFT_0788 are separated by 90 nucleotidesB158DRAFT_0788 and B158DRAFT_0789 are separated by 19 nucleotides B158DRAFT_0785: B158DRAFT_0785 - hypothetical protein, at 789,382 to 790,347 _0785 B158DRAFT_0786: B158DRAFT_0786 - orotate phosphoribosyltransferase (EC 2.4.2.10), at 790,369 to 791,016 _0786 B158DRAFT_0787: B158DRAFT_0787 - PilZ domain., at 791,154 to 791,447 _0787 B158DRAFT_0788: B158DRAFT_0788 - dimethyladenosine transferase, at 791,538 to 792,347 _0788 B158DRAFT_0789: B158DRAFT_0789 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 792,367 to 793,365 _0789 Position (kb) 791 792Strain fitness (log2 ratio) -2 -1 0 1at 790.288 kb on + strandat 790.368 kb on + strandat 791.133 kb on - strandat 791.349 kb on - strand, within B158DRAFT_0787at 791.384 kb on + strand, within B158DRAFT_0787at 791.384 kb on + strand, within B158DRAFT_0787at 791.384 kb on + strand, within B158DRAFT_0787at 791.384 kb on + strand, within B158DRAFT_0787at 791.434 kb on + strandat 791.442 kb on - strandat 791.503 kb on + strandat 791.511 kb on - strandat 791.571 kb on + strandat 791.579 kb on - strandat 791.595 kb on + strandat 791.595 kb on + strandat 791.605 kb on + strandat 791.608 kb on - strandat 791.618 kb on + strandat 791.633 kb on + strand, within B158DRAFT_0788at 791.680 kb on + strand, within B158DRAFT_0788at 791.703 kb on + strand, within B158DRAFT_0788at 791.727 kb on + strand, within B158DRAFT_0788at 791.745 kb on + strand, within B158DRAFT_0788at 791.758 kb on - strand, within B158DRAFT_0788at 791.763 kb on - strand, within B158DRAFT_0788at 791.779 kb on - strand, within B158DRAFT_0788at 791.779 kb on - strand, within B158DRAFT_0788at 791.813 kb on - strand, within B158DRAFT_0788at 791.832 kb on - strand, within B158DRAFT_0788at 791.889 kb on + strand, within B158DRAFT_0788at 791.897 kb on + strand, within B158DRAFT_0788at 791.905 kb on - strand, within B158DRAFT_0788at 791.915 kb on - strand, within B158DRAFT_0788at 791.955 kb on + strand, within B158DRAFT_0788at 791.999 kb on - strand, within B158DRAFT_0788at 792.006 kb on + strand, within B158DRAFT_0788at 792.030 kb on - strand, within B158DRAFT_0788at 792.030 kb on - strand, within B158DRAFT_0788at 792.030 kb on - strand, within B158DRAFT_0788at 792.030 kb on - strand, within B158DRAFT_0788at 792.085 kb on + strand, within B158DRAFT_0788at 792.136 kb on + strand, within B158DRAFT_0788at 792.169 kb on + strand, within B158DRAFT_0788at 792.177 kb on - strand, within B158DRAFT_0788at 792.205 kb on - strand, within B158DRAFT_0788at 792.211 kb on - strand, within B158DRAFT_0788at 792.254 kb on + strand, within B158DRAFT_0788at 792.268 kb on + strandat 792.312 kb on + strandat 792.322 kb on + strandat 792.322 kb on + strandat 792.329 kb on - strandat 792.388 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorate 20 mM
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790,288 + -0.1
790,368 + -0.0
791,133 - -0.1
791,349 - B158DRAFT_0787 0.66 -0.0
791,384 + B158DRAFT_0787 0.78 -0.1
791,384 + B158DRAFT_0787 0.78 +0.5
791,384 + B158DRAFT_0787 0.78 +0.4
791,384 + B158DRAFT_0787 0.78 +0.6
791,434 + +0.1
791,442 - +0.0
791,503 + +1.2
791,511 - +0.1
791,571 + -0.3
791,579 - -0.1
791,595 + +0.3
791,595 + +0.2
791,605 + -0.8
791,608 - -0.6
791,618 + -0.6
791,633 + B158DRAFT_0788 0.12 +1.1
791,680 + B158DRAFT_0788 0.18 -0.8
791,703 + B158DRAFT_0788 0.20 -0.2
791,727 + B158DRAFT_0788 0.23 -0.3
791,745 + B158DRAFT_0788 0.26 -0.1
791,758 - B158DRAFT_0788 0.27 +0.4
791,763 - B158DRAFT_0788 0.28 -0.7
791,779 - B158DRAFT_0788 0.30 -0.6
791,779 - B158DRAFT_0788 0.30 +0.0
791,813 - B158DRAFT_0788 0.34 -0.5
791,832 - B158DRAFT_0788 0.36 -1.5
791,889 + B158DRAFT_0788 0.43 -0.5
791,897 + B158DRAFT_0788 0.44 -0.2
791,905 - B158DRAFT_0788 0.45 -0.4
791,915 - B158DRAFT_0788 0.47 +0.0
791,955 + B158DRAFT_0788 0.51 -0.8
791,999 - B158DRAFT_0788 0.57 -0.8
792,006 + B158DRAFT_0788 0.58 +0.3
792,030 - B158DRAFT_0788 0.61 -0.4
792,030 - B158DRAFT_0788 0.61 -0.1
792,030 - B158DRAFT_0788 0.61 -1.0
792,030 - B158DRAFT_0788 0.61 -1.1
792,085 + B158DRAFT_0788 0.68 -0.3
792,136 + B158DRAFT_0788 0.74 -0.6
792,169 + B158DRAFT_0788 0.78 -0.4
792,177 - B158DRAFT_0788 0.79 -0.6
792,205 - B158DRAFT_0788 0.82 +0.7
792,211 - B158DRAFT_0788 0.83 -0.0
792,254 + B158DRAFT_0788 0.88 -0.3
792,268 + -0.6
792,312 + -0.5
792,322 + -0.6
792,322 + -1.1
792,329 - -0.1
792,388 + -2.0

Or see this region's nucleotide sequence