Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1710 and B158DRAFT_1711 are separated by 33 nucleotides B158DRAFT_1711 and B158DRAFT_1712 are separated by 78 nucleotides B158DRAFT_1712 and B158DRAFT_1713 are separated by 13 nucleotides B158DRAFT_1713 and B158DRAFT_1714 are separated by 27 nucleotides
B158DRAFT_1710: B158DRAFT_1710 - Uncharacterized membrane protein, at 1,786,207 to 1,786,662
_1710
B158DRAFT_1711: B158DRAFT_1711 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2, at 1,786,696 to 1,787,442
_1711
B158DRAFT_1712: B158DRAFT_1712 - hypothetical protein, at 1,787,521 to 1,788,528
_1712
B158DRAFT_1713: B158DRAFT_1713 - hypothetical protein, at 1,788,542 to 1,789,270
_1713
B158DRAFT_1714: B158DRAFT_1714 - hypothetical protein, at 1,789,298 to 1,789,897
_1714
Position (kb)
1787
1788
1789 Strain fitness (log2 ratio)
-2
-1
0
1 at 1786.540 kb on + strand, within B158DRAFT_1710 at 1786.540 kb on + strand, within B158DRAFT_1710 at 1786.572 kb on - strand, within B158DRAFT_1710 at 1786.631 kb on - strand at 1786.656 kb on - strand at 1786.674 kb on + strand at 1786.703 kb on + strand at 1786.703 kb on + strand at 1786.782 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.794 kb on + strand, within B158DRAFT_1711 at 1786.802 kb on - strand, within B158DRAFT_1711 at 1786.863 kb on + strand, within B158DRAFT_1711 at 1786.875 kb on + strand, within B158DRAFT_1711 at 1786.930 kb on - strand, within B158DRAFT_1711 at 1786.985 kb on - strand, within B158DRAFT_1711 at 1786.994 kb on + strand, within B158DRAFT_1711 at 1786.997 kb on - strand, within B158DRAFT_1711 at 1787.003 kb on - strand, within B158DRAFT_1711 at 1787.046 kb on + strand, within B158DRAFT_1711 at 1787.046 kb on + strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.114 kb on + strand, within B158DRAFT_1711 at 1787.114 kb on + strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.131 kb on + strand, within B158DRAFT_1711 at 1787.185 kb on - strand, within B158DRAFT_1711 at 1787.213 kb on + strand, within B158DRAFT_1711 at 1787.221 kb on - strand, within B158DRAFT_1711 at 1787.381 kb on - strand at 1787.401 kb on - strand at 1787.417 kb on + strand at 1787.417 kb on + strand at 1787.443 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.489 kb on + strand at 1787.510 kb on + strand at 1787.511 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.520 kb on - strand at 1787.520 kb on - strand at 1787.520 kb on - strand at 1787.523 kb on + strand at 1787.531 kb on - strand at 1787.531 kb on - strand at 1787.580 kb on - strand at 1787.600 kb on + strand at 1787.765 kb on + strand, within B158DRAFT_1712 at 1787.773 kb on - strand, within B158DRAFT_1712 at 1787.819 kb on + strand, within B158DRAFT_1712 at 1787.912 kb on + strand, within B158DRAFT_1712 at 1787.912 kb on - strand, within B158DRAFT_1712 at 1788.000 kb on + strand, within B158DRAFT_1712 at 1788.001 kb on + strand, within B158DRAFT_1712 at 1788.001 kb on + strand, within B158DRAFT_1712 at 1788.087 kb on - strand, within B158DRAFT_1712 at 1788.143 kb on - strand, within B158DRAFT_1712 at 1788.153 kb on + strand, within B158DRAFT_1712 at 1788.246 kb on + strand, within B158DRAFT_1712 at 1788.305 kb on + strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.381 kb on - strand, within B158DRAFT_1712 at 1788.439 kb on + strand at 1788.450 kb on + strand at 1788.458 kb on - strand at 1788.503 kb on - strand at 1788.504 kb on + strand at 1788.512 kb on - strand at 1788.512 kb on - strand at 1788.640 kb on - strand, within B158DRAFT_1713 at 1788.676 kb on + strand, within B158DRAFT_1713 at 1788.698 kb on - strand, within B158DRAFT_1713 at 1788.731 kb on - strand, within B158DRAFT_1713 at 1788.740 kb on + strand, within B158DRAFT_1713 at 1788.741 kb on - strand, within B158DRAFT_1713 at 1788.763 kb on - strand, within B158DRAFT_1713 at 1788.976 kb on + strand, within B158DRAFT_1713 at 1788.994 kb on - strand, within B158DRAFT_1713 at 1789.026 kb on - strand, within B158DRAFT_1713 at 1789.100 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.118 kb on - strand, within B158DRAFT_1713 at 1789.262 kb on - strand at 1789.276 kb on - strand at 1789.320 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,786,540 + B158DRAFT_1710 0.73 -1.7 1,786,540 + B158DRAFT_1710 0.73 +0.3 1,786,572 - B158DRAFT_1710 0.80 +0.1 1,786,631 - -0.3 1,786,656 - -0.1 1,786,674 + +0.1 1,786,703 + -0.4 1,786,703 + -0.6 1,786,782 + B158DRAFT_1711 0.12 +0.1 1,786,784 + B158DRAFT_1711 0.12 -2.2 1,786,784 + B158DRAFT_1711 0.12 -2.4 1,786,784 + B158DRAFT_1711 0.12 -0.6 1,786,784 + B158DRAFT_1711 0.12 -1.3 1,786,784 + B158DRAFT_1711 0.12 -1.0 1,786,784 + B158DRAFT_1711 0.12 -0.5 1,786,784 + B158DRAFT_1711 0.12 +0.9 1,786,784 + B158DRAFT_1711 0.12 -1.6 1,786,784 + B158DRAFT_1711 0.12 -1.5 1,786,792 - B158DRAFT_1711 0.13 +0.3 1,786,792 - B158DRAFT_1711 0.13 -0.9 1,786,792 - B158DRAFT_1711 0.13 -0.7 1,786,792 - B158DRAFT_1711 0.13 -0.7 1,786,792 - B158DRAFT_1711 0.13 -0.9 1,786,794 + B158DRAFT_1711 0.13 +0.1 1,786,802 - B158DRAFT_1711 0.14 -0.0 1,786,863 + B158DRAFT_1711 0.22 -0.3 1,786,875 + B158DRAFT_1711 0.24 -1.7 1,786,930 - B158DRAFT_1711 0.31 -0.1 1,786,985 - B158DRAFT_1711 0.39 -1.3 1,786,994 + B158DRAFT_1711 0.40 -1.9 1,786,997 - B158DRAFT_1711 0.40 -0.7 1,787,003 - B158DRAFT_1711 0.41 -1.0 1,787,046 + B158DRAFT_1711 0.47 -1.1 1,787,046 + B158DRAFT_1711 0.47 -1.2 1,787,054 - B158DRAFT_1711 0.48 -1.9 1,787,054 - B158DRAFT_1711 0.48 -1.9 1,787,054 - B158DRAFT_1711 0.48 -0.9 1,787,114 + B158DRAFT_1711 0.56 -1.7 1,787,114 + B158DRAFT_1711 0.56 -0.7 1,787,122 - B158DRAFT_1711 0.57 +0.3 1,787,122 - B158DRAFT_1711 0.57 -1.1 1,787,122 - B158DRAFT_1711 0.57 -0.9 1,787,122 - B158DRAFT_1711 0.57 -0.9 1,787,131 + B158DRAFT_1711 0.58 +0.4 1,787,185 - B158DRAFT_1711 0.65 -1.1 1,787,213 + B158DRAFT_1711 0.69 -0.7 1,787,221 - B158DRAFT_1711 0.70 -1.6 1,787,381 - -0.9 1,787,401 - -0.8 1,787,417 + -0.5 1,787,417 + -1.4 1,787,443 + -0.9 1,787,462 + -0.5 1,787,462 + -0.3 1,787,462 + -0.3 1,787,462 + -0.3 1,787,462 + -0.5 1,787,462 + -0.6 1,787,462 + -0.1 1,787,462 + +0.1 1,787,462 + +0.2 1,787,462 + +0.1 1,787,470 - +0.5 1,787,470 - +0.3 1,787,470 - -0.6 1,787,470 - +0.4 1,787,470 - -0.3 1,787,470 - +0.3 1,787,470 - +0.2 1,787,489 + -0.2 1,787,510 + -1.3 1,787,511 + -0.2 1,787,512 + -0.1 1,787,512 + +0.2 1,787,512 + +0.0 1,787,512 + -1.4 1,787,512 + +0.2 1,787,520 - +0.7 1,787,520 - -0.9 1,787,520 - +0.4 1,787,523 + +0.6 1,787,531 - +0.3 1,787,531 - +0.3 1,787,580 - -1.3 1,787,600 + +0.4 1,787,765 + B158DRAFT_1712 0.24 -0.4 1,787,773 - B158DRAFT_1712 0.25 +0.2 1,787,819 + B158DRAFT_1712 0.30 +0.3 1,787,912 + B158DRAFT_1712 0.39 -0.1 1,787,912 - B158DRAFT_1712 0.39 +0.2 1,788,000 + B158DRAFT_1712 0.48 -0.2 1,788,001 + B158DRAFT_1712 0.48 +1.3 1,788,001 + B158DRAFT_1712 0.48 +0.1 1,788,087 - B158DRAFT_1712 0.56 +1.2 1,788,143 - B158DRAFT_1712 0.62 +0.0 1,788,153 + B158DRAFT_1712 0.63 +0.7 1,788,246 + B158DRAFT_1712 0.72 -0.2 1,788,305 + B158DRAFT_1712 0.78 +0.0 1,788,311 - B158DRAFT_1712 0.78 +0.3 1,788,311 - B158DRAFT_1712 0.78 -0.6 1,788,381 - B158DRAFT_1712 0.85 -0.2 1,788,439 + -0.0 1,788,450 + +0.5 1,788,458 - -0.3 1,788,503 - +0.3 1,788,504 + +0.1 1,788,512 - +0.1 1,788,512 - -0.2 1,788,640 - B158DRAFT_1713 0.13 +0.1 1,788,676 + B158DRAFT_1713 0.18 -0.1 1,788,698 - B158DRAFT_1713 0.21 +0.3 1,788,731 - B158DRAFT_1713 0.26 +0.2 1,788,740 + B158DRAFT_1713 0.27 +0.3 1,788,741 - B158DRAFT_1713 0.27 -0.5 1,788,763 - B158DRAFT_1713 0.30 -0.4 1,788,976 + B158DRAFT_1713 0.60 +0.5 1,788,994 - B158DRAFT_1713 0.62 -0.2 1,789,026 - B158DRAFT_1713 0.66 +0.1 1,789,100 + B158DRAFT_1713 0.77 -0.3 1,789,110 + B158DRAFT_1713 0.78 -0.3 1,789,110 + B158DRAFT_1713 0.78 -0.0 1,789,110 + B158DRAFT_1713 0.78 -0.4 1,789,118 - B158DRAFT_1713 0.79 +0.8 1,789,262 - +0.5 1,789,276 - -0.3 1,789,320 + -0.2
Or see this region's nucleotide sequence