Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1445 and B158DRAFT_1446 are separated by 381 nucleotides B158DRAFT_1446 and B158DRAFT_1447 are separated by 1 nucleotides
B158DRAFT_1445: B158DRAFT_1445 - Phenylalanine 4-hydroxylase (EC 1.14.16.1), at 1,498,797 to 1,499,600
_1445
B158DRAFT_1446: B158DRAFT_1446 - 4-hydroxyphenylpyruvate dioxygenase, at 1,499,982 to 1,501,043
_1446
B158DRAFT_1447: B158DRAFT_1447 - homogentisate 1,2-dioxygenase (EC 1.13.11.5), at 1,501,045 to 1,502,175
_1447
Position (kb)
1499
1500
1501
1502 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1499.036 kb on - strand, within B158DRAFT_1445 at 1499.085 kb on + strand, within B158DRAFT_1445 at 1499.085 kb on + strand, within B158DRAFT_1445 at 1499.106 kb on + strand, within B158DRAFT_1445 at 1499.216 kb on - strand, within B158DRAFT_1445 at 1499.229 kb on + strand, within B158DRAFT_1445 at 1499.254 kb on - strand, within B158DRAFT_1445 at 1499.303 kb on - strand, within B158DRAFT_1445 at 1499.325 kb on - strand, within B158DRAFT_1445 at 1499.348 kb on + strand, within B158DRAFT_1445 at 1499.386 kb on + strand, within B158DRAFT_1445 at 1499.435 kb on + strand, within B158DRAFT_1445 at 1499.439 kb on - strand, within B158DRAFT_1445 at 1499.460 kb on + strand, within B158DRAFT_1445 at 1499.509 kb on + strand, within B158DRAFT_1445 at 1499.510 kb on + strand, within B158DRAFT_1445 at 1499.528 kb on + strand at 1499.545 kb on + strand at 1499.555 kb on + strand at 1499.558 kb on - strand at 1499.562 kb on + strand at 1499.563 kb on - strand at 1499.600 kb on + strand at 1499.605 kb on + strand at 1499.717 kb on - strand at 1499.747 kb on + strand at 1499.747 kb on + strand at 1499.755 kb on - strand at 1499.758 kb on + strand at 1499.785 kb on - strand at 1499.795 kb on - strand at 1499.808 kb on + strand at 1499.867 kb on + strand at 1499.867 kb on + strand at 1499.874 kb on - strand at 1499.875 kb on - strand at 1499.875 kb on - strand at 1499.929 kb on - strand at 1500.010 kb on + strand at 1500.037 kb on + strand at 1500.177 kb on - strand, within B158DRAFT_1446 at 1500.187 kb on + strand, within B158DRAFT_1446 at 1500.224 kb on - strand, within B158DRAFT_1446 at 1500.226 kb on + strand, within B158DRAFT_1446 at 1500.233 kb on + strand, within B158DRAFT_1446 at 1500.276 kb on + strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.294 kb on - strand, within B158DRAFT_1446 at 1500.323 kb on - strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.354 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.392 kb on - strand, within B158DRAFT_1446 at 1500.445 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on - strand, within B158DRAFT_1446 at 1500.481 kb on + strand, within B158DRAFT_1446 at 1500.488 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on - strand, within B158DRAFT_1446 at 1500.504 kb on - strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.593 kb on + strand, within B158DRAFT_1446 at 1500.680 kb on + strand, within B158DRAFT_1446 at 1500.680 kb on + strand, within B158DRAFT_1446 at 1500.686 kb on - strand, within B158DRAFT_1446 at 1500.687 kb on + strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.696 kb on + strand, within B158DRAFT_1446 at 1500.696 kb on + strand, within B158DRAFT_1446 at 1500.702 kb on - strand, within B158DRAFT_1446 at 1500.704 kb on - strand, within B158DRAFT_1446 at 1500.778 kb on + strand, within B158DRAFT_1446 at 1500.824 kb on + strand, within B158DRAFT_1446 at 1500.881 kb on - strand, within B158DRAFT_1446 at 1500.931 kb on - strand, within B158DRAFT_1446 at 1500.953 kb on + strand at 1500.961 kb on - strand at 1500.961 kb on - strand at 1500.971 kb on - strand at 1500.994 kb on - strand at 1500.994 kb on - strand at 1501.006 kb on - strand at 1501.023 kb on + strand at 1501.037 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.095 kb on + strand at 1501.098 kb on - strand at 1501.108 kb on - strand at 1501.139 kb on - strand at 1501.155 kb on + strand at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.278 kb on - strand, within B158DRAFT_1447 at 1501.283 kb on + strand, within B158DRAFT_1447 at 1501.291 kb on + strand, within B158DRAFT_1447 at 1501.291 kb on - strand, within B158DRAFT_1447 at 1501.354 kb on - strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.405 kb on + strand, within B158DRAFT_1447 at 1501.413 kb on - strand, within B158DRAFT_1447 at 1501.469 kb on + strand, within B158DRAFT_1447 at 1501.609 kb on - strand, within B158DRAFT_1447 at 1501.615 kb on + strand, within B158DRAFT_1447 at 1501.651 kb on - strand, within B158DRAFT_1447 at 1501.801 kb on + strand, within B158DRAFT_1447 at 1501.801 kb on + strand, within B158DRAFT_1447 at 1501.810 kb on + strand, within B158DRAFT_1447 at 1501.876 kb on - strand, within B158DRAFT_1447 at 1501.881 kb on - strand, within B158DRAFT_1447 at 1501.924 kb on - strand, within B158DRAFT_1447 at 1501.986 kb on - strand, within B158DRAFT_1447 at 1502.002 kb on + strand, within B158DRAFT_1447 at 1502.009 kb on + strand, within B158DRAFT_1447 at 1502.030 kb on - strand, within B158DRAFT_1447 at 1502.039 kb on - strand, within B158DRAFT_1447 at 1502.041 kb on + strand, within B158DRAFT_1447 at 1502.041 kb on + strand, within B158DRAFT_1447
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,499,036 - B158DRAFT_1445 0.30 -0.7 1,499,085 + B158DRAFT_1445 0.36 -0.4 1,499,085 + B158DRAFT_1445 0.36 -1.3 1,499,106 + B158DRAFT_1445 0.38 -0.1 1,499,216 - B158DRAFT_1445 0.52 +0.1 1,499,229 + B158DRAFT_1445 0.54 -0.8 1,499,254 - B158DRAFT_1445 0.57 -0.2 1,499,303 - B158DRAFT_1445 0.63 -1.2 1,499,325 - B158DRAFT_1445 0.66 +0.2 1,499,348 + B158DRAFT_1445 0.69 -0.4 1,499,386 + B158DRAFT_1445 0.73 -0.5 1,499,435 + B158DRAFT_1445 0.79 -1.4 1,499,439 - B158DRAFT_1445 0.80 -0.5 1,499,460 + B158DRAFT_1445 0.82 -0.5 1,499,509 + B158DRAFT_1445 0.89 +0.1 1,499,510 + B158DRAFT_1445 0.89 -0.5 1,499,528 + -0.5 1,499,545 + -0.5 1,499,555 + -0.5 1,499,558 - -0.9 1,499,562 + -0.1 1,499,563 - -0.1 1,499,600 + -0.2 1,499,605 + -0.0 1,499,717 - -1.3 1,499,747 + -0.7 1,499,747 + -0.6 1,499,755 - -1.2 1,499,758 + +0.2 1,499,785 - -0.8 1,499,795 - -1.3 1,499,808 + -0.8 1,499,867 + -0.2 1,499,867 + -0.4 1,499,874 - -1.7 1,499,875 - -2.5 1,499,875 - -0.9 1,499,929 - -2.0 1,500,010 + -0.8 1,500,037 + -1.3 1,500,177 - B158DRAFT_1446 0.18 -0.6 1,500,187 + B158DRAFT_1446 0.19 -0.8 1,500,224 - B158DRAFT_1446 0.23 -1.6 1,500,226 + B158DRAFT_1446 0.23 -1.3 1,500,233 + B158DRAFT_1446 0.24 -0.8 1,500,276 + B158DRAFT_1446 0.28 +0.7 1,500,284 - B158DRAFT_1446 0.28 -0.8 1,500,284 - B158DRAFT_1446 0.28 -1.5 1,500,286 + B158DRAFT_1446 0.29 -3.2 1,500,286 + B158DRAFT_1446 0.29 -1.3 1,500,294 - B158DRAFT_1446 0.29 -1.6 1,500,323 - B158DRAFT_1446 0.32 -2.3 1,500,351 + B158DRAFT_1446 0.35 -1.1 1,500,351 + B158DRAFT_1446 0.35 -0.9 1,500,351 + B158DRAFT_1446 0.35 -0.8 1,500,351 + B158DRAFT_1446 0.35 -0.6 1,500,351 + B158DRAFT_1446 0.35 -0.6 1,500,354 - B158DRAFT_1446 0.35 -1.5 1,500,359 - B158DRAFT_1446 0.35 -1.9 1,500,359 - B158DRAFT_1446 0.35 -1.7 1,500,359 - B158DRAFT_1446 0.35 -1.5 1,500,359 - B158DRAFT_1446 0.35 -2.2 1,500,359 - B158DRAFT_1446 0.35 -2.5 1,500,359 - B158DRAFT_1446 0.35 -1.8 1,500,359 - B158DRAFT_1446 0.35 -1.5 1,500,359 - B158DRAFT_1446 0.35 -2.2 1,500,359 - B158DRAFT_1446 0.35 -1.8 1,500,359 - B158DRAFT_1446 0.35 -1.8 1,500,359 - B158DRAFT_1446 0.35 -1.2 1,500,359 - B158DRAFT_1446 0.35 -1.9 1,500,359 - B158DRAFT_1446 0.35 -1.5 1,500,392 - B158DRAFT_1446 0.39 -2.0 1,500,445 + B158DRAFT_1446 0.44 -1.6 1,500,460 + B158DRAFT_1446 0.45 -1.3 1,500,460 + B158DRAFT_1446 0.45 -1.4 1,500,460 - B158DRAFT_1446 0.45 -3.7 1,500,481 + B158DRAFT_1446 0.47 +0.5 1,500,488 + B158DRAFT_1446 0.48 -1.0 1,500,496 + B158DRAFT_1446 0.48 -1.1 1,500,496 + B158DRAFT_1446 0.48 -0.7 1,500,496 - B158DRAFT_1446 0.48 -1.3 1,500,504 - B158DRAFT_1446 0.49 -2.5 1,500,579 + B158DRAFT_1446 0.56 -0.0 1,500,579 + B158DRAFT_1446 0.56 -0.1 1,500,579 + -0.3 1,500,579 + B158DRAFT_1446 0.56 -0.6 1,500,587 - B158DRAFT_1446 0.57 -1.8 1,500,587 - B158DRAFT_1446 0.57 -1.0 1,500,587 - B158DRAFT_1446 0.57 -1.8 1,500,593 + B158DRAFT_1446 0.58 -0.7 1,500,680 + B158DRAFT_1446 0.66 -1.2 1,500,680 + B158DRAFT_1446 0.66 -0.1 1,500,686 - B158DRAFT_1446 0.66 -1.8 1,500,687 + B158DRAFT_1446 0.66 -0.3 1,500,688 - B158DRAFT_1446 0.66 +0.4 1,500,688 - B158DRAFT_1446 0.66 -0.7 1,500,688 - B158DRAFT_1446 0.66 +0.5 1,500,688 - B158DRAFT_1446 0.66 -0.1 1,500,696 + B158DRAFT_1446 0.67 -0.0 1,500,696 + B158DRAFT_1446 0.67 -0.6 1,500,702 - B158DRAFT_1446 0.68 -1.4 1,500,704 - B158DRAFT_1446 0.68 -1.5 1,500,778 + B158DRAFT_1446 0.75 -1.1 1,500,824 + B158DRAFT_1446 0.79 -0.5 1,500,881 - B158DRAFT_1446 0.85 -1.5 1,500,931 - B158DRAFT_1446 0.89 -2.6 1,500,953 + -1.3 1,500,961 - -1.0 1,500,961 - -2.4 1,500,971 - -0.9 1,500,994 - -0.8 1,500,994 - -2.7 1,501,006 - -2.2 1,501,023 + +0.9 1,501,037 + -1.8 1,501,090 + -1.4 1,501,090 + -0.5 1,501,090 + -2.3 1,501,090 + -1.7 1,501,090 + -1.2 1,501,095 + -1.3 1,501,098 - -1.8 1,501,108 - -1.9 1,501,139 - -2.7 1,501,155 + -1.3 1,501,260 + B158DRAFT_1447 0.19 -2.2 1,501,260 + B158DRAFT_1447 0.19 +0.3 1,501,260 + B158DRAFT_1447 0.19 -1.2 1,501,260 + B158DRAFT_1447 0.19 -0.8 1,501,260 + B158DRAFT_1447 0.19 -1.0 1,501,260 + B158DRAFT_1447 0.19 -0.7 1,501,260 + B158DRAFT_1447 0.19 -0.5 1,501,260 + B158DRAFT_1447 0.19 -1.0 1,501,268 - B158DRAFT_1447 0.20 -3.2 1,501,268 - B158DRAFT_1447 0.20 -2.6 1,501,268 - B158DRAFT_1447 0.20 -3.6 1,501,268 - B158DRAFT_1447 0.20 -2.3 1,501,268 - B158DRAFT_1447 0.20 -4.0 1,501,268 - B158DRAFT_1447 0.20 -2.5 1,501,278 - B158DRAFT_1447 0.21 -2.3 1,501,283 + B158DRAFT_1447 0.21 -1.7 1,501,291 + B158DRAFT_1447 0.22 -2.3 1,501,291 - B158DRAFT_1447 0.22 -4.1 1,501,354 - B158DRAFT_1447 0.27 -2.4 1,501,395 + B158DRAFT_1447 0.31 -0.3 1,501,395 + B158DRAFT_1447 0.31 -1.1 1,501,395 + B158DRAFT_1447 0.31 -0.9 1,501,395 + B158DRAFT_1447 0.31 -2.2 1,501,403 - B158DRAFT_1447 0.32 -2.1 1,501,403 - B158DRAFT_1447 0.32 -3.6 1,501,403 - B158DRAFT_1447 0.32 -4.3 1,501,403 - B158DRAFT_1447 0.32 +0.3 1,501,403 - B158DRAFT_1447 0.32 -2.1 1,501,403 - B158DRAFT_1447 0.32 -1.4 1,501,403 - B158DRAFT_1447 0.32 -3.5 1,501,405 + B158DRAFT_1447 0.32 -0.7 1,501,413 - B158DRAFT_1447 0.33 -3.7 1,501,469 + B158DRAFT_1447 0.37 -1.6 1,501,609 - B158DRAFT_1447 0.50 -2.5 1,501,615 + B158DRAFT_1447 0.50 -2.2 1,501,651 - B158DRAFT_1447 0.54 -3.5 1,501,801 + B158DRAFT_1447 0.67 -0.8 1,501,801 + B158DRAFT_1447 0.67 -0.2 1,501,810 + B158DRAFT_1447 0.68 -0.4 1,501,876 - B158DRAFT_1447 0.73 -1.8 1,501,881 - B158DRAFT_1447 0.74 -4.1 1,501,924 - B158DRAFT_1447 0.78 -3.9 1,501,986 - B158DRAFT_1447 0.83 -1.3 1,502,002 + B158DRAFT_1447 0.85 -0.4 1,502,009 + B158DRAFT_1447 0.85 +0.1 1,502,030 - B158DRAFT_1447 0.87 -2.4 1,502,039 - B158DRAFT_1447 0.88 -3.6 1,502,041 + B158DRAFT_1447 0.88 +0.0 1,502,041 + B158DRAFT_1447 0.88 -0.5
Or see this region's nucleotide sequence