Experiment: m.b. nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1227 and B158DRAFT_1228 are separated by 212 nucleotides B158DRAFT_1228 and B158DRAFT_1229 are separated by 72 nucleotides B158DRAFT_1229 and B158DRAFT_1230 are separated by 1 nucleotides
B158DRAFT_1227: B158DRAFT_1227 - ABC-type spermidine/putrescine transport systems, ATPase components, at 1,266,840 to 1,267,910
_1227
B158DRAFT_1228: B158DRAFT_1228 - monothiol glutaredoxin, Grx4 family, at 1,268,123 to 1,268,452
_1228
B158DRAFT_1229: B158DRAFT_1229 - Uncharacterized conserved protein, at 1,268,525 to 1,269,235
_1229
B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917
_1230
Position (kb)
1268
1269 Strain fitness (log2 ratio)
-2
-1
0
1 at 1268.002 kb on - strand at 1268.048 kb on - strand at 1268.133 kb on + strand at 1268.141 kb on - strand at 1268.172 kb on - strand, within B158DRAFT_1228 at 1268.286 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.349 kb on - strand, within B158DRAFT_1228 at 1268.391 kb on + strand, within B158DRAFT_1228 at 1268.409 kb on - strand, within B158DRAFT_1228 at 1268.417 kb on + strand, within B158DRAFT_1228 at 1268.447 kb on + strand at 1268.481 kb on - strand at 1268.531 kb on - strand at 1268.647 kb on - strand, within B158DRAFT_1229 at 1268.673 kb on + strand, within B158DRAFT_1229 at 1268.728 kb on + strand, within B158DRAFT_1229 at 1268.731 kb on - strand, within B158DRAFT_1229 at 1268.866 kb on + strand, within B158DRAFT_1229 at 1268.881 kb on + strand, within B158DRAFT_1229 at 1268.901 kb on + strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.964 kb on - strand, within B158DRAFT_1229 at 1269.053 kb on - strand, within B158DRAFT_1229 at 1269.225 kb on + strand at 1269.233 kb on - strand at 1269.243 kb on + strand at 1269.243 kb on - strand at 1269.267 kb on + strand at 1269.269 kb on - strand at 1269.276 kb on + strand at 1269.276 kb on + strand at 1269.284 kb on - strand at 1269.288 kb on + strand at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.307 kb on + strand, within B158DRAFT_1230 at 1269.334 kb on + strand, within B158DRAFT_1230 at 1269.419 kb on - strand, within B158DRAFT_1230 at 1269.432 kb on + strand, within B158DRAFT_1230 at 1269.448 kb on - strand, within B158DRAFT_1230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM remove 1,268,002 - -2.2 1,268,048 - +0.3 1,268,133 + -0.8 1,268,141 - +0.2 1,268,172 - B158DRAFT_1228 0.15 -0.1 1,268,286 + B158DRAFT_1228 0.49 -0.3 1,268,341 + B158DRAFT_1228 0.66 -1.1 1,268,341 + B158DRAFT_1228 0.66 -2.0 1,268,341 + B158DRAFT_1228 0.66 +0.3 1,268,341 + B158DRAFT_1228 0.66 -0.7 1,268,349 - B158DRAFT_1228 0.68 -1.5 1,268,391 + B158DRAFT_1228 0.81 -1.3 1,268,409 - B158DRAFT_1228 0.87 -1.0 1,268,417 + B158DRAFT_1228 0.89 +0.5 1,268,447 + -0.5 1,268,481 - -1.0 1,268,531 - -0.3 1,268,647 - B158DRAFT_1229 0.17 -0.3 1,268,673 + B158DRAFT_1229 0.21 -1.0 1,268,728 + B158DRAFT_1229 0.29 +0.1 1,268,731 - B158DRAFT_1229 0.29 -0.1 1,268,866 + B158DRAFT_1229 0.48 -0.2 1,268,881 + B158DRAFT_1229 0.50 -0.4 1,268,901 + B158DRAFT_1229 0.53 +0.0 1,268,942 - B158DRAFT_1229 0.59 -0.1 1,268,942 - B158DRAFT_1229 0.59 -0.9 1,268,964 - B158DRAFT_1229 0.62 -0.8 1,269,053 - B158DRAFT_1229 0.74 -0.7 1,269,225 + -0.3 1,269,233 - +0.0 1,269,243 + -0.2 1,269,243 - -0.1 1,269,267 + -0.3 1,269,269 - -0.3 1,269,276 + -0.2 1,269,276 + -0.1 1,269,284 - +0.2 1,269,288 + +0.3 1,269,306 + B158DRAFT_1230 0.10 +0.3 1,269,306 + B158DRAFT_1230 0.10 +0.3 1,269,307 + B158DRAFT_1230 0.10 +0.1 1,269,334 + B158DRAFT_1230 0.14 -0.1 1,269,419 - B158DRAFT_1230 0.27 -0.1 1,269,432 + B158DRAFT_1230 0.29 +0.4 1,269,448 - B158DRAFT_1230 0.31 -0.5
Or see this region's nucleotide sequence