Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0585

Experiment: m.b. nitrate 200 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0583 and B158DRAFT_0584 are separated by 5 nucleotidesB158DRAFT_0584 and B158DRAFT_0585 are separated by 216 nucleotidesB158DRAFT_0585 and B158DRAFT_0586 are separated by 25 nucleotidesB158DRAFT_0586 and B158DRAFT_0587 are separated by 2 nucleotides B158DRAFT_0583: B158DRAFT_0583 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 589,457 to 590,266 _0583 B158DRAFT_0584: B158DRAFT_0584 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 590,272 to 590,649 _0584 B158DRAFT_0585: B158DRAFT_0585 - Short-chain alcohol dehydrogenase of unknown specificity, at 590,866 to 591,648 _0585 B158DRAFT_0586: B158DRAFT_0586 - Uncharacterized protein conserved in bacteria, at 591,674 to 592,102 _0586 B158DRAFT_0587: B158DRAFT_0587 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 592,105 to 592,587 _0587 Position (kb) 590 591 592Strain fitness (log2 ratio) -2 -1 0 1at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.919 kb on - strand, within B158DRAFT_0583at 589.993 kb on - strand, within B158DRAFT_0583at 590.040 kb on + strand, within B158DRAFT_0583at 590.083 kb on - strand, within B158DRAFT_0583at 590.125 kb on - strand, within B158DRAFT_0583at 590.183 kb on - strand, within B158DRAFT_0583at 590.185 kb on - strand, within B158DRAFT_0583at 590.195 kb on - strandat 590.381 kb on + strand, within B158DRAFT_0584at 590.381 kb on + strand, within B158DRAFT_0584at 590.381 kb on + strand, within B158DRAFT_0584at 590.388 kb on + strand, within B158DRAFT_0584at 590.388 kb on + strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.391 kb on - strand, within B158DRAFT_0584at 590.391 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.442 kb on - strand, within B158DRAFT_0584at 590.452 kb on + strand, within B158DRAFT_0584at 590.460 kb on - strand, within B158DRAFT_0584at 590.460 kb on - strand, within B158DRAFT_0584at 590.520 kb on - strand, within B158DRAFT_0584at 590.525 kb on + strand, within B158DRAFT_0584at 590.535 kb on - strand, within B158DRAFT_0584at 590.545 kb on - strand, within B158DRAFT_0584at 590.554 kb on + strand, within B158DRAFT_0584at 590.558 kb on - strand, within B158DRAFT_0584at 590.568 kb on - strand, within B158DRAFT_0584at 590.663 kb on - strandat 590.715 kb on - strandat 590.730 kb on + strandat 590.738 kb on - strandat 590.808 kb on + strandat 590.808 kb on + strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.854 kb on + strandat 590.917 kb on - strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.972 kb on - strand, within B158DRAFT_0585at 591.017 kb on + strand, within B158DRAFT_0585at 591.024 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.103 kb on + strand, within B158DRAFT_0585at 591.132 kb on + strand, within B158DRAFT_0585at 591.167 kb on - strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.398 kb on + strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.408 kb on - strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.502 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.520 kb on + strand, within B158DRAFT_0585at 591.526 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.543 kb on + strand, within B158DRAFT_0585at 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.653 kb on + strandat 591.661 kb on - strandat 591.733 kb on - strand, within B158DRAFT_0586at 591.771 kb on - strand, within B158DRAFT_0586at 591.888 kb on - strand, within B158DRAFT_0586at 591.913 kb on - strand, within B158DRAFT_0586at 591.929 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.946 kb on - strand, within B158DRAFT_0586at 592.004 kb on + strand, within B158DRAFT_0586at 592.012 kb on - strand, within B158DRAFT_0586at 592.052 kb on + strand, within B158DRAFT_0586at 592.129 kb on + strandat 592.162 kb on + strand, within B158DRAFT_0587at 592.162 kb on + strand, within B158DRAFT_0587at 592.170 kb on - strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.283 kb on - strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.342 kb on - strand, within B158DRAFT_0587at 592.351 kb on + strand, within B158DRAFT_0587at 592.374 kb on + strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.389 kb on - strand, within B158DRAFT_0587at 592.390 kb on - strand, within B158DRAFT_0587at 592.421 kb on + strand, within B158DRAFT_0587at 592.448 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.528 kb on + strand, within B158DRAFT_0587

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. nitrate 200 mM
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589,873 - B158DRAFT_0583 0.51 -0.3
589,873 - B158DRAFT_0583 0.51 -0.3
589,873 - B158DRAFT_0583 0.51 -0.4
589,919 - B158DRAFT_0583 0.57 -0.3
589,993 - B158DRAFT_0583 0.66 +0.1
590,040 + B158DRAFT_0583 0.72 -0.2
590,083 - B158DRAFT_0583 0.77 -0.1
590,125 - B158DRAFT_0583 0.82 +0.0
590,183 - B158DRAFT_0583 0.90 -0.3
590,185 - B158DRAFT_0583 0.90 -0.2
590,195 - -0.7
590,381 + B158DRAFT_0584 0.29 -0.5
590,381 + B158DRAFT_0584 0.29 -0.7
590,381 + B158DRAFT_0584 0.29 -0.3
590,388 + B158DRAFT_0584 0.31 +0.1
590,388 + B158DRAFT_0584 0.31 -0.5
590,389 - B158DRAFT_0584 0.31 -0.2
590,389 - B158DRAFT_0584 0.31 +0.1
590,389 - B158DRAFT_0584 0.31 -0.6
590,389 - B158DRAFT_0584 0.31 -0.3
590,389 - B158DRAFT_0584 0.31 -0.3
590,389 - B158DRAFT_0584 0.31 -0.3
590,391 - B158DRAFT_0584 0.31 -0.4
590,391 - B158DRAFT_0584 0.31 -0.6
590,396 - B158DRAFT_0584 0.33 +0.5
590,396 - B158DRAFT_0584 0.33 -0.3
590,396 - B158DRAFT_0584 0.33 -1.4
590,396 - B158DRAFT_0584 0.33 +0.4
590,424 + B158DRAFT_0584 0.40 -0.3
590,424 + B158DRAFT_0584 0.40 -0.3
590,424 + B158DRAFT_0584 0.40 -0.5
590,424 + B158DRAFT_0584 0.40 -0.3
590,429 + B158DRAFT_0584 0.42 -0.4
590,429 + B158DRAFT_0584 0.42 -1.7
590,429 + B158DRAFT_0584 0.42 -0.1
590,437 - B158DRAFT_0584 0.44 +0.0
590,437 - B158DRAFT_0584 0.44 -0.1
590,437 - B158DRAFT_0584 0.44 -0.1
590,437 - B158DRAFT_0584 0.44 -2.3
590,437 - B158DRAFT_0584 0.44 -0.2
590,437 - B158DRAFT_0584 0.44 -0.3
590,442 - B158DRAFT_0584 0.45 -0.1
590,452 + B158DRAFT_0584 0.48 -0.4
590,460 - B158DRAFT_0584 0.50 +0.3
590,460 - B158DRAFT_0584 0.50 +0.4
590,520 - B158DRAFT_0584 0.66 -0.4
590,525 + B158DRAFT_0584 0.67 -0.3
590,535 - B158DRAFT_0584 0.70 -0.3
590,545 - B158DRAFT_0584 0.72 +0.4
590,554 + B158DRAFT_0584 0.75 -0.2
590,558 - B158DRAFT_0584 0.76 -0.5
590,568 - B158DRAFT_0584 0.78 -0.1
590,663 - +0.1
590,715 - +1.6
590,730 + -0.5
590,738 - -0.1
590,808 + -0.5
590,808 + -0.4
590,816 - -0.8
590,816 - -0.1
590,816 - +0.0
590,816 - -0.6
590,816 - -0.4
590,854 + -0.1
590,917 - -0.1
590,920 + -0.0
590,920 + +0.1
590,920 + -0.5
590,920 + -0.3
590,920 + +0.2
590,920 + -0.0
590,920 + -0.3
590,928 - -0.3
590,928 - -0.4
590,928 - +0.7
590,928 - -0.3
590,928 - -0.6
590,928 - -1.1
590,928 - +0.0
590,972 - B158DRAFT_0585 0.14 -1.0
591,017 + B158DRAFT_0585 0.19 -0.7
591,024 + B158DRAFT_0585 0.20 +0.9
591,078 + B158DRAFT_0585 0.27 -0.1
591,078 + B158DRAFT_0585 0.27 -0.2
591,078 + B158DRAFT_0585 0.27 +0.0
591,078 + B158DRAFT_0585 0.27 +0.2
591,086 - B158DRAFT_0585 0.28 -0.1
591,086 - B158DRAFT_0585 0.28 -0.2
591,086 - B158DRAFT_0585 0.28 +0.4
591,086 - B158DRAFT_0585 0.28 -0.5
591,086 - B158DRAFT_0585 0.28 -0.1
591,086 - B158DRAFT_0585 0.28 -1.1
591,086 - B158DRAFT_0585 0.28 -0.4
591,103 + B158DRAFT_0585 0.30 -0.0
591,132 + B158DRAFT_0585 0.34 +0.3
591,167 - B158DRAFT_0585 0.38 +0.0
591,190 + B158DRAFT_0585 0.41 +1.3
591,190 + B158DRAFT_0585 0.41 -0.2
591,198 - B158DRAFT_0585 0.42 -1.0
591,198 - B158DRAFT_0585 0.42 -0.2
591,398 + B158DRAFT_0585 0.68 -0.4
591,406 - B158DRAFT_0585 0.69 -0.2
591,406 - B158DRAFT_0585 0.69 +0.3
591,408 - B158DRAFT_0585 0.69 +0.3
591,495 + B158DRAFT_0585 0.80 -0.2
591,495 + B158DRAFT_0585 0.80 -0.0
591,502 + B158DRAFT_0585 0.81 -0.2
591,518 + B158DRAFT_0585 0.83 -0.2
591,518 + B158DRAFT_0585 0.83 -0.4
591,518 + B158DRAFT_0585 0.83 -0.5
591,518 + B158DRAFT_0585 0.83 -0.1
591,520 + B158DRAFT_0585 0.84 -1.9
591,526 - B158DRAFT_0585 0.84 -1.6
591,528 - B158DRAFT_0585 0.85 -0.4
591,528 - B158DRAFT_0585 0.85 -0.4
591,543 + B158DRAFT_0585 0.86 -0.5
591,609 + +0.0
591,609 + +0.1
591,609 + -0.3
591,609 + -0.3
591,609 + +0.3
591,609 + +0.4
591,609 + -0.0
591,609 + -0.1
591,609 + -0.5
591,609 + -0.0
591,609 + -0.8
591,609 + -0.1
591,609 + -0.2
591,609 + -0.3
591,609 + +0.0
591,609 + -0.1
591,609 + -0.2
591,609 + +0.0
591,609 + -0.4
591,609 + -0.5
591,617 - -0.9
591,617 - +0.0
591,617 - -2.3
591,617 - +0.6
591,617 - -0.5
591,617 - -1.3
591,617 - +0.1
591,617 - -0.5
591,617 - +0.4
591,617 - -0.3
591,617 - +0.3
591,617 - -0.3
591,617 - -0.2
591,617 - -0.2
591,617 - +1.3
591,617 - -0.3
591,651 - -0.1
591,651 - +0.0
591,651 - -0.3
591,653 + +1.1
591,661 - +0.2
591,733 - B158DRAFT_0586 0.14 -0.4
591,771 - B158DRAFT_0586 0.23 -1.1
591,888 - B158DRAFT_0586 0.50 -0.5
591,913 - B158DRAFT_0586 0.56 -0.5
591,929 - B158DRAFT_0586 0.59 -0.3
591,934 - B158DRAFT_0586 0.61 -0.1
591,934 - B158DRAFT_0586 0.61 -0.4
591,946 - B158DRAFT_0586 0.63 -0.5
592,004 + B158DRAFT_0586 0.77 -0.3
592,012 - B158DRAFT_0586 0.79 -0.0
592,052 + B158DRAFT_0586 0.88 -0.1
592,129 + -0.3
592,162 + B158DRAFT_0587 0.12 -0.4
592,162 + B158DRAFT_0587 0.12 +0.3
592,170 - B158DRAFT_0587 0.13 -0.3
592,178 + B158DRAFT_0587 0.15 +0.9
592,178 + B158DRAFT_0587 0.15 +0.7
592,275 + B158DRAFT_0587 0.35 -0.7
592,275 + B158DRAFT_0587 0.35 -0.8
592,275 + B158DRAFT_0587 0.35 -0.3
592,283 - B158DRAFT_0587 0.37 -0.5
592,334 + B158DRAFT_0587 0.47 -0.8
592,334 + B158DRAFT_0587 0.47 -0.5
592,342 - B158DRAFT_0587 0.49 -0.3
592,351 + B158DRAFT_0587 0.51 +0.3
592,374 + B158DRAFT_0587 0.56 +0.6
592,382 - B158DRAFT_0587 0.57 +0.2
592,382 - B158DRAFT_0587 0.57 -0.6
592,382 - B158DRAFT_0587 0.57 -0.1
592,389 - B158DRAFT_0587 0.59 -1.1
592,390 - B158DRAFT_0587 0.59 -0.6
592,421 + B158DRAFT_0587 0.65 -1.0
592,448 + B158DRAFT_0587 0.71 +0.7
592,473 + B158DRAFT_0587 0.76 -0.5
592,473 + B158DRAFT_0587 0.76 -0.9
592,473 + B158DRAFT_0587 0.76 +0.1
592,528 + B158DRAFT_0587 0.88 -0.7

Or see this region's nucleotide sequence