Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2422 and B158DRAFT_2423 are separated by 89 nucleotides B158DRAFT_2423 and B158DRAFT_2424 are separated by 467 nucleotides
B158DRAFT_2422: B158DRAFT_2422 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 592,523 to 595,474
_2422
B158DRAFT_2423: B158DRAFT_2423 - ATPases involved in chromosome partitioning, at 595,564 to 596,274
_2423
B158DRAFT_2424: B158DRAFT_2424 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 596,742 to 597,776
_2424
Position (kb) 595
596
597 Strain fitness (log2 ratio) -1
0
1 at 594.757 kb on - strand, within B158DRAFT_2422 at 594.805 kb on + strand, within B158DRAFT_2422 at 594.835 kb on + strand, within B158DRAFT_2422 at 594.835 kb on + strand, within B158DRAFT_2422 at 594.835 kb on - strand, within B158DRAFT_2422 at 594.843 kb on - strand, within B158DRAFT_2422 at 594.843 kb on - strand, within B158DRAFT_2422 at 594.910 kb on + strand, within B158DRAFT_2422 at 594.915 kb on + strand, within B158DRAFT_2422 at 594.915 kb on + strand, within B158DRAFT_2422 at 594.915 kb on + strand, within B158DRAFT_2422 at 594.984 kb on - strand, within B158DRAFT_2422 at 595.053 kb on + strand, within B158DRAFT_2422 at 595.126 kb on + strand, within B158DRAFT_2422 at 595.133 kb on - strand, within B158DRAFT_2422 at 595.134 kb on - strand, within B158DRAFT_2422 at 595.199 kb on - strand at 595.213 kb on + strand at 595.221 kb on - strand at 595.296 kb on + strand at 595.365 kb on + strand at 595.368 kb on - strand at 595.373 kb on - strand at 595.428 kb on + strand at 595.522 kb on - strand at 595.522 kb on - strand at 595.564 kb on - strand at 595.609 kb on + strand at 595.663 kb on + strand, within B158DRAFT_2423 at 595.671 kb on - strand, within B158DRAFT_2423 at 595.734 kb on - strand, within B158DRAFT_2423 at 595.762 kb on + strand, within B158DRAFT_2423 at 595.770 kb on - strand, within B158DRAFT_2423 at 595.865 kb on - strand, within B158DRAFT_2423 at 595.898 kb on + strand, within B158DRAFT_2423 at 595.905 kb on - strand, within B158DRAFT_2423 at 595.930 kb on + strand, within B158DRAFT_2423 at 595.930 kb on + strand, within B158DRAFT_2423 at 595.938 kb on - strand, within B158DRAFT_2423 at 595.938 kb on - strand, within B158DRAFT_2423 at 596.116 kb on - strand, within B158DRAFT_2423 at 596.117 kb on + strand, within B158DRAFT_2423 at 596.117 kb on + strand, within B158DRAFT_2423 at 596.125 kb on - strand, within B158DRAFT_2423 at 596.127 kb on + strand, within B158DRAFT_2423 at 596.127 kb on + strand, within B158DRAFT_2423 at 596.217 kb on + strand at 596.225 kb on - strand at 596.293 kb on + strand at 596.775 kb on - strand at 596.823 kb on + strand at 596.838 kb on + strand at 596.924 kb on + strand, within B158DRAFT_2424 at 596.971 kb on + strand, within B158DRAFT_2424 at 596.978 kb on + strand, within B158DRAFT_2424 at 596.996 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.013 kb on + strand, within B158DRAFT_2424 at 597.021 kb on - strand, within B158DRAFT_2424 at 597.079 kb on - strand, within B158DRAFT_2424 at 597.108 kb on + strand, within B158DRAFT_2424 at 597.114 kb on - strand, within B158DRAFT_2424 at 597.146 kb on + strand, within B158DRAFT_2424 at 597.146 kb on + strand, within B158DRAFT_2424 at 597.202 kb on + strand, within B158DRAFT_2424
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 594,757 - B158DRAFT_2422 0.76 -0.3 594,805 + B158DRAFT_2422 0.77 -0.2 594,835 + B158DRAFT_2422 0.78 -1.2 594,835 + B158DRAFT_2422 0.78 +0.4 594,835 - B158DRAFT_2422 0.78 +0.6 594,843 - B158DRAFT_2422 0.79 +0.3 594,843 - B158DRAFT_2422 0.79 +0.5 594,910 + B158DRAFT_2422 0.81 +0.6 594,915 + B158DRAFT_2422 0.81 -0.7 594,915 + B158DRAFT_2422 0.81 +0.2 594,915 + B158DRAFT_2422 0.81 +1.0 594,984 - B158DRAFT_2422 0.83 +0.3 595,053 + B158DRAFT_2422 0.86 -0.2 595,126 + B158DRAFT_2422 0.88 +0.5 595,133 - B158DRAFT_2422 0.88 +0.7 595,134 - B158DRAFT_2422 0.88 +1.0 595,199 - -0.1 595,213 + +0.1 595,221 - -0.0 595,296 + +1.5 595,365 + +0.2 595,368 - -0.2 595,373 - -0.7 595,428 + -0.0 595,522 - -0.5 595,522 - -0.5 595,564 - -0.8 595,609 + -0.1 595,663 + B158DRAFT_2423 0.14 -0.2 595,671 - B158DRAFT_2423 0.15 -0.9 595,734 - B158DRAFT_2423 0.24 -0.9 595,762 + B158DRAFT_2423 0.28 -0.1 595,770 - B158DRAFT_2423 0.29 -1.2 595,865 - B158DRAFT_2423 0.42 -0.8 595,898 + B158DRAFT_2423 0.47 -0.3 595,905 - B158DRAFT_2423 0.48 -1.0 595,930 + B158DRAFT_2423 0.51 -0.0 595,930 + B158DRAFT_2423 0.51 -0.2 595,938 - B158DRAFT_2423 0.53 -0.8 595,938 - B158DRAFT_2423 0.53 -0.5 596,116 - B158DRAFT_2423 0.78 -1.1 596,117 + B158DRAFT_2423 0.78 +0.2 596,117 + B158DRAFT_2423 0.78 -0.2 596,125 - B158DRAFT_2423 0.79 -1.5 596,127 + B158DRAFT_2423 0.79 -1.3 596,127 + B158DRAFT_2423 0.79 -1.2 596,217 + -0.4 596,225 - -0.3 596,293 + -0.2 596,775 - -0.7 596,823 + -1.0 596,838 + -0.7 596,924 + B158DRAFT_2424 0.18 -1.0 596,971 + B158DRAFT_2424 0.22 -0.5 596,978 + B158DRAFT_2424 0.23 -0.5 596,996 + B158DRAFT_2424 0.25 -0.2 597,013 + B158DRAFT_2424 0.26 -1.0 597,013 + B158DRAFT_2424 0.26 -0.6 597,013 + B158DRAFT_2424 0.26 -1.7 597,013 + B158DRAFT_2424 0.26 -1.7 597,013 + B158DRAFT_2424 0.26 -1.5 597,013 + B158DRAFT_2424 0.26 -1.1 597,013 + B158DRAFT_2424 0.26 -1.3 597,013 + B158DRAFT_2424 0.26 -0.7 597,021 - B158DRAFT_2424 0.27 -0.7 597,079 - B158DRAFT_2424 0.33 -1.3 597,108 + B158DRAFT_2424 0.35 -1.7 597,114 - B158DRAFT_2424 0.36 -0.9 597,146 + B158DRAFT_2424 0.39 -0.6 597,146 + B158DRAFT_2424 0.39 -1.0 597,202 + B158DRAFT_2424 0.44 -1.0
Or see this region's nucleotide sequence