Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2397 and B158DRAFT_2398 are separated by 3 nucleotides B158DRAFT_2398 and B158DRAFT_2399 are separated by 129 nucleotides B158DRAFT_2399 and B158DRAFT_2400 are separated by 37 nucleotides B158DRAFT_2400 and B158DRAFT_2401 are separated by 138 nucleotides
B158DRAFT_2397: B158DRAFT_2397 - ribosomal protein L21, at 569,269 to 569,850
_2397
B158DRAFT_2398: B158DRAFT_2398 - ribosomal protein L27, at 569,854 to 570,108
_2398
B158DRAFT_2399: B158DRAFT_2399 - Obg family GTPase CgtA, at 570,238 to 571,509
_2399
B158DRAFT_2400: B158DRAFT_2400 - Uncharacterized conserved protein, at 571,547 to 572,089
_2400
B158DRAFT_2401: B158DRAFT_2401 - Protein of unknown function (DUF1329)., at 572,228 to 573,580
_2401
Position (kb) 570
571
572 Strain fitness (log2 ratio) -2
-1
0
1 at 570.137 kb on - strand at 570.214 kb on + strand at 570.214 kb on + strand at 570.214 kb on + strand at 570.214 kb on + strand at 571.294 kb on + strand, within B158DRAFT_2399 at 571.302 kb on - strand, within B158DRAFT_2399 at 571.342 kb on + strand, within B158DRAFT_2399 at 571.473 kb on + strand at 571.595 kb on + strand at 571.595 kb on + strand at 571.595 kb on + strand at 571.615 kb on + strand, within B158DRAFT_2400 at 571.618 kb on - strand, within B158DRAFT_2400 at 571.623 kb on - strand, within B158DRAFT_2400 at 571.733 kb on + strand, within B158DRAFT_2400 at 571.733 kb on + strand, within B158DRAFT_2400 at 571.836 kb on + strand, within B158DRAFT_2400 at 571.975 kb on + strand, within B158DRAFT_2400 at 572.118 kb on - strand at 572.157 kb on + strand at 572.157 kb on + strand at 572.163 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.165 kb on - strand at 572.194 kb on + strand at 572.196 kb on + strand at 572.202 kb on - strand at 572.202 kb on - strand at 572.242 kb on - strand at 572.281 kb on - strand at 572.312 kb on + strand at 572.359 kb on + strand at 572.375 kb on - strand, within B158DRAFT_2401 at 572.411 kb on - strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.421 kb on + strand, within B158DRAFT_2401 at 572.429 kb on - strand, within B158DRAFT_2401 at 572.431 kb on - strand, within B158DRAFT_2401 at 572.455 kb on + strand, within B158DRAFT_2401
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 570,137 - +0.5 570,214 + +0.2 570,214 + +0.6 570,214 + -1.2 570,214 + -0.1 571,294 + B158DRAFT_2399 0.83 -0.8 571,302 - B158DRAFT_2399 0.84 -0.9 571,342 + B158DRAFT_2399 0.87 -0.2 571,473 + -1.0 571,595 + +0.5 571,595 + -0.4 571,595 + -0.0 571,615 + B158DRAFT_2400 0.13 -0.0 571,618 - B158DRAFT_2400 0.13 -0.2 571,623 - B158DRAFT_2400 0.14 +0.5 571,733 + B158DRAFT_2400 0.34 -0.1 571,733 + B158DRAFT_2400 0.34 +0.6 571,836 + B158DRAFT_2400 0.53 -0.5 571,975 + B158DRAFT_2400 0.79 +0.8 572,118 - -0.1 572,157 + +0.2 572,157 + -0.2 572,163 - -0.2 572,165 - +0.3 572,165 - -0.3 572,165 - +0.3 572,165 - -0.8 572,194 + -0.6 572,196 + +0.0 572,202 - -0.2 572,202 - -0.2 572,242 - -1.8 572,281 - -0.2 572,312 + -0.5 572,359 + -0.6 572,375 - B158DRAFT_2401 0.11 -0.6 572,411 - B158DRAFT_2401 0.14 -0.2 572,421 + B158DRAFT_2401 0.14 -0.8 572,421 + B158DRAFT_2401 0.14 +0.2 572,421 + B158DRAFT_2401 0.14 -1.6 572,429 - B158DRAFT_2401 0.15 +0.2 572,431 - B158DRAFT_2401 0.15 -0.6 572,455 + B158DRAFT_2401 0.17 -0.4
Or see this region's nucleotide sequence