Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2395 and B158DRAFT_2396 are separated by 265 nucleotides B158DRAFT_2396 and B158DRAFT_2397 are separated by 283 nucleotides B158DRAFT_2397 and B158DRAFT_2398 are separated by 3 nucleotides
B158DRAFT_2395: B158DRAFT_2395 - phosphoenolpyruvate carboxykinase (ATP), at 566,147 to 567,748
_2395
B158DRAFT_2396: B158DRAFT_2396 - Geranylgeranyl pyrophosphate synthase, at 568,014 to 568,985
_2396
B158DRAFT_2397: B158DRAFT_2397 - ribosomal protein L21, at 569,269 to 569,850
_2397
B158DRAFT_2398: B158DRAFT_2398 - ribosomal protein L27, at 569,854 to 570,108
_2398
Position (kb) 568
569 Strain fitness (log2 ratio) -2
-1
0
1 at 567.014 kb on - strand, within B158DRAFT_2395 at 567.071 kb on + strand, within B158DRAFT_2395 at 567.071 kb on + strand, within B158DRAFT_2395 at 567.084 kb on - strand, within B158DRAFT_2395 at 567.084 kb on - strand, within B158DRAFT_2395 at 567.091 kb on - strand, within B158DRAFT_2395 at 567.130 kb on - strand, within B158DRAFT_2395 at 567.240 kb on - strand, within B158DRAFT_2395 at 567.247 kb on + strand, within B158DRAFT_2395 at 567.255 kb on - strand, within B158DRAFT_2395 at 567.255 kb on - strand, within B158DRAFT_2395 at 567.285 kb on - strand, within B158DRAFT_2395 at 567.449 kb on - strand, within B158DRAFT_2395 at 567.647 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.774 kb on + strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.782 kb on - strand at 567.802 kb on + strand at 567.835 kb on + strand at 567.876 kb on - strand at 567.935 kb on + strand at 567.936 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.941 kb on + strand at 567.944 kb on - strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.946 kb on + strand at 567.948 kb on + strand at 567.948 kb on + strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.954 kb on - strand at 567.956 kb on - strand at 568.012 kb on + strand at 569.070 kb on - strand at 569.097 kb on + strand at 569.104 kb on - strand at 569.105 kb on - strand at 569.105 kb on - strand at 569.107 kb on + strand at 569.108 kb on + strand at 569.108 kb on + strand at 569.108 kb on + strand at 569.115 kb on - strand at 569.116 kb on - strand at 569.116 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 567,014 - B158DRAFT_2395 0.54 +0.9 567,071 + B158DRAFT_2395 0.58 -0.2 567,071 + B158DRAFT_2395 0.58 -0.3 567,084 - B158DRAFT_2395 0.58 -0.9 567,084 - B158DRAFT_2395 0.58 +0.1 567,091 - B158DRAFT_2395 0.59 -0.3 567,130 - B158DRAFT_2395 0.61 -0.0 567,240 - B158DRAFT_2395 0.68 +0.5 567,247 + B158DRAFT_2395 0.69 -0.3 567,255 - B158DRAFT_2395 0.69 -0.4 567,255 - B158DRAFT_2395 0.69 +0.1 567,285 - B158DRAFT_2395 0.71 +0.2 567,449 - B158DRAFT_2395 0.81 -0.1 567,647 + -0.4 567,774 + -0.1 567,774 + +0.0 567,774 + -0.7 567,774 + +0.1 567,782 - +0.1 567,782 - +0.2 567,782 - -1.6 567,782 - +0.3 567,802 + -1.7 567,835 + -0.8 567,876 - -0.0 567,935 + -0.3 567,936 + +0.2 567,941 + -0.0 567,941 + +0.7 567,941 + +0.1 567,941 + -0.2 567,941 + +0.9 567,944 - -1.1 567,946 + -0.4 567,946 + +0.8 567,946 + -0.5 567,946 + -0.0 567,946 + +0.4 567,946 + -0.3 567,946 + -0.3 567,948 + +1.1 567,948 + -0.8 567,954 - -0.8 567,954 - +0.4 567,954 - -0.2 567,954 - +0.2 567,954 - -0.6 567,954 - -0.2 567,954 - +0.2 567,954 - +0.1 567,954 - +0.2 567,954 - +0.5 567,954 - -1.0 567,954 - -0.7 567,956 - -0.9 568,012 + +0.9 569,070 - -0.2 569,097 + +0.6 569,104 - -0.7 569,105 - -0.3 569,105 - -1.9 569,107 + -1.5 569,108 + -0.0 569,108 + -0.3 569,108 + -0.2 569,115 - +0.3 569,116 - -1.2 569,116 - -0.3
Or see this region's nucleotide sequence