Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1744 and B158DRAFT_1745 are separated by 51 nucleotides B158DRAFT_1745 and B158DRAFT_1746 are separated by 27 nucleotides B158DRAFT_1746 and B158DRAFT_1747 are separated by 57 nucleotides
B158DRAFT_1744: B158DRAFT_1744 - Predicted Zn-dependent peptidases, at 1,826,354 to 1,829,209
_1744
B158DRAFT_1745: B158DRAFT_1745 - hydrolase, TatD family, at 1,829,261 to 1,830,055
_1745
B158DRAFT_1746: B158DRAFT_1746 - Tfp pilus assembly protein PilZ, at 1,830,083 to 1,830,433
_1746
B158DRAFT_1747: B158DRAFT_1747 - DNA polymerase III, delta' subunit, at 1,830,491 to 1,831,489
_1747
Position (kb)
1829
1830
1831 Strain fitness (log2 ratio)
-1
0
1 at 1828.321 kb on + strand, within B158DRAFT_1744 at 1828.321 kb on + strand, within B158DRAFT_1744 at 1828.435 kb on + strand, within B158DRAFT_1744 at 1828.578 kb on + strand, within B158DRAFT_1744 at 1828.640 kb on - strand, within B158DRAFT_1744 at 1828.660 kb on + strand, within B158DRAFT_1744 at 1828.660 kb on + strand, within B158DRAFT_1744 at 1828.668 kb on - strand, within B158DRAFT_1744 at 1828.827 kb on - strand, within B158DRAFT_1744 at 1828.836 kb on - strand, within B158DRAFT_1744 at 1828.868 kb on + strand, within B158DRAFT_1744 at 1828.868 kb on + strand, within B158DRAFT_1744 at 1828.876 kb on - strand, within B158DRAFT_1744 at 1828.884 kb on + strand, within B158DRAFT_1744 at 1828.900 kb on - strand, within B158DRAFT_1744 at 1829.025 kb on + strand at 1829.025 kb on + strand at 1829.223 kb on - strand at 1829.345 kb on + strand, within B158DRAFT_1745 at 1829.353 kb on - strand, within B158DRAFT_1745 at 1829.482 kb on - strand, within B158DRAFT_1745 at 1829.543 kb on + strand, within B158DRAFT_1745 at 1829.551 kb on - strand, within B158DRAFT_1745 at 1829.575 kb on + strand, within B158DRAFT_1745 at 1829.575 kb on + strand, within B158DRAFT_1745 at 1829.575 kb on + strand, within B158DRAFT_1745 at 1829.583 kb on - strand, within B158DRAFT_1745 at 1829.583 kb on - strand, within B158DRAFT_1745 at 1829.585 kb on + strand, within B158DRAFT_1745 at 1829.585 kb on + strand, within B158DRAFT_1745 at 1829.593 kb on - strand, within B158DRAFT_1745 at 1829.593 kb on - strand, within B158DRAFT_1745 at 1829.593 kb on - strand, within B158DRAFT_1745 at 1829.593 kb on - strand, within B158DRAFT_1745 at 1829.593 kb on - strand, within B158DRAFT_1745 at 1829.647 kb on - strand, within B158DRAFT_1745 at 1829.657 kb on + strand, within B158DRAFT_1745 at 1829.657 kb on + strand, within B158DRAFT_1745 at 1829.765 kb on - strand, within B158DRAFT_1745 at 1829.790 kb on + strand, within B158DRAFT_1745 at 1829.822 kb on + strand, within B158DRAFT_1745 at 1829.829 kb on - strand, within B158DRAFT_1745 at 1829.850 kb on - strand, within B158DRAFT_1745 at 1829.869 kb on - strand, within B158DRAFT_1745 at 1829.919 kb on + strand, within B158DRAFT_1745 at 1829.919 kb on + strand, within B158DRAFT_1745 at 1829.927 kb on - strand, within B158DRAFT_1745 at 1829.937 kb on - strand, within B158DRAFT_1745 at 1829.937 kb on - strand, within B158DRAFT_1745 at 1829.951 kb on - strand, within B158DRAFT_1745 at 1829.953 kb on + strand, within B158DRAFT_1745 at 1829.978 kb on + strand at 1829.978 kb on + strand at 1829.985 kb on + strand at 1830.016 kb on + strand at 1830.016 kb on + strand at 1830.024 kb on - strand at 1830.028 kb on + strand at 1830.046 kb on - strand at 1830.080 kb on + strand at 1830.088 kb on - strand at 1830.305 kb on + strand, within B158DRAFT_1746 at 1830.412 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,828,321 + B158DRAFT_1744 0.69 -0.5 1,828,321 + B158DRAFT_1744 0.69 -0.3 1,828,435 + B158DRAFT_1744 0.73 -0.5 1,828,578 + B158DRAFT_1744 0.78 -0.7 1,828,640 - B158DRAFT_1744 0.80 +0.2 1,828,660 + B158DRAFT_1744 0.81 -0.1 1,828,660 + B158DRAFT_1744 0.81 +1.6 1,828,668 - B158DRAFT_1744 0.81 -1.1 1,828,827 - B158DRAFT_1744 0.87 +0.9 1,828,836 - B158DRAFT_1744 0.87 +0.2 1,828,868 + B158DRAFT_1744 0.88 -0.2 1,828,868 + B158DRAFT_1744 0.88 +0.2 1,828,876 - B158DRAFT_1744 0.88 -0.3 1,828,884 + B158DRAFT_1744 0.89 -0.4 1,828,900 - B158DRAFT_1744 0.89 +0.0 1,829,025 + -1.4 1,829,025 + -0.2 1,829,223 - -0.8 1,829,345 + B158DRAFT_1745 0.11 +0.1 1,829,353 - B158DRAFT_1745 0.12 -0.3 1,829,482 - B158DRAFT_1745 0.28 -1.3 1,829,543 + B158DRAFT_1745 0.35 -0.1 1,829,551 - B158DRAFT_1745 0.36 -0.9 1,829,575 + B158DRAFT_1745 0.39 -1.1 1,829,575 + B158DRAFT_1745 0.39 -0.4 1,829,575 + B158DRAFT_1745 0.39 +0.3 1,829,583 - B158DRAFT_1745 0.41 -1.0 1,829,583 - B158DRAFT_1745 0.41 +0.4 1,829,585 + B158DRAFT_1745 0.41 -0.8 1,829,585 + B158DRAFT_1745 0.41 -0.5 1,829,593 - B158DRAFT_1745 0.42 +0.3 1,829,593 - B158DRAFT_1745 0.42 -1.4 1,829,593 - B158DRAFT_1745 0.42 +0.0 1,829,593 - B158DRAFT_1745 0.42 -0.7 1,829,593 - B158DRAFT_1745 0.42 +0.2 1,829,647 - B158DRAFT_1745 0.49 -0.0 1,829,657 + B158DRAFT_1745 0.50 -0.3 1,829,657 + B158DRAFT_1745 0.50 +0.3 1,829,765 - B158DRAFT_1745 0.63 -0.3 1,829,790 + B158DRAFT_1745 0.67 +0.1 1,829,822 + B158DRAFT_1745 0.71 -0.4 1,829,829 - B158DRAFT_1745 0.71 -0.3 1,829,850 - B158DRAFT_1745 0.74 -0.2 1,829,869 - B158DRAFT_1745 0.76 +0.1 1,829,919 + B158DRAFT_1745 0.83 -0.9 1,829,919 + B158DRAFT_1745 0.83 -0.4 1,829,927 - B158DRAFT_1745 0.84 -0.2 1,829,937 - B158DRAFT_1745 0.85 -0.1 1,829,937 - B158DRAFT_1745 0.85 +0.7 1,829,951 - B158DRAFT_1745 0.87 -0.8 1,829,953 + B158DRAFT_1745 0.87 -0.6 1,829,978 + -1.1 1,829,978 + -0.0 1,829,985 + -1.0 1,830,016 + -0.4 1,830,016 + -0.8 1,830,024 - -1.1 1,830,028 + +0.0 1,830,046 - -0.2 1,830,080 + +0.4 1,830,088 - -0.4 1,830,305 + B158DRAFT_1746 0.63 +0.7 1,830,412 + +0.4
Or see this region's nucleotide sequence