Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1077

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1074 and B158DRAFT_1075 are separated by 38 nucleotidesB158DRAFT_1075 and B158DRAFT_1076 are separated by 9 nucleotidesB158DRAFT_1076 and B158DRAFT_1077 are separated by 135 nucleotidesB158DRAFT_1077 and B158DRAFT_1078 are separated by 6 nucleotidesB158DRAFT_1078 and B158DRAFT_1080 are separated by 417 nucleotides B158DRAFT_1074: B158DRAFT_1074 - hypothetical protein, at 1,114,542 to 1,114,988 _1074 B158DRAFT_1075: B158DRAFT_1075 - hypothetical protein, at 1,115,027 to 1,115,227 _1075 B158DRAFT_1076: B158DRAFT_1076 - Protein of unknown function (DUF3617)., at 1,115,237 to 1,115,671 _1076 B158DRAFT_1077: B158DRAFT_1077 - Fatty-acid desaturase, at 1,115,807 to 1,116,718 _1077 B158DRAFT_1078: B158DRAFT_1078 - hypothetical protein, at 1,116,725 to 1,117,114 _1078 B158DRAFT_1080: B158DRAFT_1080 - ribosomal protein S2, bacterial type, at 1,117,532 to 1,118,266 _1080 Position (kb) 1115 1116 1117Strain fitness (log2 ratio) -2 -1 0 1at 1114.912 kb on - strand, within B158DRAFT_1074at 1114.926 kb on + strand, within B158DRAFT_1074at 1114.929 kb on - strand, within B158DRAFT_1074at 1114.929 kb on - strand, within B158DRAFT_1074at 1114.929 kb on - strand, within B158DRAFT_1074at 1114.931 kb on + strand, within B158DRAFT_1074at 1114.934 kb on - strand, within B158DRAFT_1074at 1114.939 kb on - strand, within B158DRAFT_1074at 1114.939 kb on - strand, within B158DRAFT_1074at 1114.939 kb on - strand, within B158DRAFT_1074at 1114.999 kb on + strandat 1115.017 kb on - strandat 1115.025 kb on - strandat 1115.083 kb on - strand, within B158DRAFT_1075at 1115.114 kb on + strand, within B158DRAFT_1075at 1115.126 kb on + strand, within B158DRAFT_1075at 1115.126 kb on + strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.134 kb on - strand, within B158DRAFT_1075at 1115.177 kb on + strand, within B158DRAFT_1075at 1115.185 kb on - strand, within B158DRAFT_1075at 1115.353 kb on - strand, within B158DRAFT_1076at 1115.368 kb on + strand, within B158DRAFT_1076at 1115.409 kb on + strand, within B158DRAFT_1076at 1115.421 kb on + strand, within B158DRAFT_1076at 1115.461 kb on + strand, within B158DRAFT_1076at 1115.488 kb on + strand, within B158DRAFT_1076at 1115.573 kb on - strand, within B158DRAFT_1076at 1115.573 kb on - strand, within B158DRAFT_1076at 1115.573 kb on - strand, within B158DRAFT_1076at 1115.578 kb on - strand, within B158DRAFT_1076at 1115.609 kb on - strand, within B158DRAFT_1076at 1115.635 kb on + strandat 1115.635 kb on + strandat 1115.635 kb on + strandat 1115.635 kb on + strandat 1115.640 kb on + strandat 1115.640 kb on + strandat 1115.643 kb on - strandat 1115.643 kb on - strandat 1115.703 kb on + strandat 1115.730 kb on - strandat 1115.735 kb on - strandat 1115.751 kb on + strandat 1115.764 kb on + strandat 1115.764 kb on + strandat 1115.764 kb on + strandat 1115.772 kb on + strandat 1115.772 kb on - strandat 1115.772 kb on - strandat 1115.785 kb on + strandat 1115.845 kb on - strandat 1115.845 kb on - strandat 1115.870 kb on - strandat 1115.879 kb on - strandat 1115.880 kb on - strandat 1115.899 kb on - strand, within B158DRAFT_1077at 1115.984 kb on - strand, within B158DRAFT_1077at 1116.043 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.076 kb on + strand, within B158DRAFT_1077at 1116.079 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.084 kb on - strand, within B158DRAFT_1077at 1116.184 kb on + strand, within B158DRAFT_1077at 1116.192 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.199 kb on - strand, within B158DRAFT_1077at 1116.201 kb on + strand, within B158DRAFT_1077at 1116.317 kb on + strand, within B158DRAFT_1077at 1116.325 kb on - strand, within B158DRAFT_1077at 1116.387 kb on - strand, within B158DRAFT_1077at 1116.420 kb on + strand, within B158DRAFT_1077at 1116.420 kb on + strand, within B158DRAFT_1077at 1116.426 kb on + strand, within B158DRAFT_1077at 1116.428 kb on - strand, within B158DRAFT_1077at 1116.428 kb on - strand, within B158DRAFT_1077at 1116.429 kb on - strand, within B158DRAFT_1077at 1116.478 kb on - strand, within B158DRAFT_1077at 1116.509 kb on + strand, within B158DRAFT_1077at 1116.509 kb on + strand, within B158DRAFT_1077at 1116.517 kb on - strand, within B158DRAFT_1077at 1116.517 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.546 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.556 kb on - strand, within B158DRAFT_1077at 1116.584 kb on + strand, within B158DRAFT_1077at 1116.639 kb on + strandat 1116.639 kb on + strandat 1116.647 kb on - strandat 1116.660 kb on + strandat 1116.660 kb on + strandat 1116.665 kb on + strandat 1116.798 kb on + strand, within B158DRAFT_1078at 1116.899 kb on + strand, within B158DRAFT_1078at 1116.935 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.033 kb on + strand, within B158DRAFT_1078at 1117.041 kb on - strand, within B158DRAFT_1078at 1117.088 kb on + strandat 1117.111 kb on + strandat 1117.118 kb on + strandat 1117.149 kb on - strandat 1117.157 kb on + strandat 1117.179 kb on - strandat 1117.184 kb on - strandat 1117.219 kb on + strandat 1117.219 kb on + strandat 1117.227 kb on - strandat 1117.227 kb on - strandat 1117.258 kb on + strandat 1117.258 kb on + strandat 1117.277 kb on - strandat 1117.296 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,114,912 - B158DRAFT_1074 0.83 -0.5
1,114,926 + B158DRAFT_1074 0.86 -0.1
1,114,929 - B158DRAFT_1074 0.87 -0.8
1,114,929 - B158DRAFT_1074 0.87 -0.2
1,114,929 - B158DRAFT_1074 0.87 -0.6
1,114,931 + B158DRAFT_1074 0.87 -1.3
1,114,934 - B158DRAFT_1074 0.88 -0.7
1,114,939 - B158DRAFT_1074 0.89 +0.1
1,114,939 - B158DRAFT_1074 0.89 +0.6
1,114,939 - B158DRAFT_1074 0.89 +0.5
1,114,999 + -0.4
1,115,017 - -0.4
1,115,025 - +0.1
1,115,083 - B158DRAFT_1075 0.28 -0.6
1,115,114 + B158DRAFT_1075 0.43 -1.9
1,115,126 + B158DRAFT_1075 0.49 -0.2
1,115,126 + B158DRAFT_1075 0.49 +0.3
1,115,134 - B158DRAFT_1075 0.53 -0.5
1,115,134 - B158DRAFT_1075 0.53 -0.3
1,115,134 - B158DRAFT_1075 0.53 -0.2
1,115,134 - B158DRAFT_1075 0.53 -1.0
1,115,134 - B158DRAFT_1075 0.53 -0.1
1,115,134 - B158DRAFT_1075 0.53 +0.7
1,115,177 + B158DRAFT_1075 0.75 -0.0
1,115,185 - B158DRAFT_1075 0.79 -0.4
1,115,353 - B158DRAFT_1076 0.27 -0.4
1,115,368 + B158DRAFT_1076 0.30 -1.1
1,115,409 + B158DRAFT_1076 0.40 -0.0
1,115,421 + B158DRAFT_1076 0.42 -0.2
1,115,461 + B158DRAFT_1076 0.51 -0.2
1,115,488 + B158DRAFT_1076 0.58 +0.0
1,115,573 - B158DRAFT_1076 0.77 -0.1
1,115,573 - B158DRAFT_1076 0.77 -0.3
1,115,573 - B158DRAFT_1076 0.77 -0.6
1,115,578 - B158DRAFT_1076 0.78 +0.2
1,115,609 - B158DRAFT_1076 0.86 +1.0
1,115,635 + -0.6
1,115,635 + -0.3
1,115,635 + +0.2
1,115,635 + -0.3
1,115,640 + -0.4
1,115,640 + -0.1
1,115,643 - -0.2
1,115,643 - -0.1
1,115,703 + -0.1
1,115,730 - -0.3
1,115,735 - -0.1
1,115,751 + +0.2
1,115,764 + -0.8
1,115,764 + +0.1
1,115,764 + -0.6
1,115,772 + -0.4
1,115,772 - +0.3
1,115,772 - -0.1
1,115,785 + -0.7
1,115,845 - +0.2
1,115,845 - +0.1
1,115,870 - +0.1
1,115,879 - -0.6
1,115,880 - -0.2
1,115,899 - B158DRAFT_1077 0.10 +0.2
1,115,984 - B158DRAFT_1077 0.19 -0.2
1,116,043 + B158DRAFT_1077 0.26 +0.5
1,116,076 + B158DRAFT_1077 0.29 -0.4
1,116,076 + B158DRAFT_1077 0.29 -0.2
1,116,076 + B158DRAFT_1077 0.29 -0.4
1,116,079 - B158DRAFT_1077 0.30 -0.0
1,116,084 - B158DRAFT_1077 0.30 -0.3
1,116,084 - B158DRAFT_1077 0.30 +0.0
1,116,084 - B158DRAFT_1077 0.30 -1.7
1,116,084 - B158DRAFT_1077 0.30 -0.3
1,116,084 - B158DRAFT_1077 0.30 -1.0
1,116,184 + B158DRAFT_1077 0.41 -0.1
1,116,192 - B158DRAFT_1077 0.42 -0.4
1,116,199 - B158DRAFT_1077 0.43 -0.4
1,116,199 - B158DRAFT_1077 0.43 -0.1
1,116,199 - B158DRAFT_1077 0.43 -2.0
1,116,201 + B158DRAFT_1077 0.43 +0.2
1,116,317 + B158DRAFT_1077 0.56 -0.0
1,116,325 - B158DRAFT_1077 0.57 -0.5
1,116,387 - B158DRAFT_1077 0.64 -1.3
1,116,420 + B158DRAFT_1077 0.67 -0.1
1,116,420 + B158DRAFT_1077 0.67 +0.7
1,116,426 + B158DRAFT_1077 0.68 -0.2
1,116,428 - B158DRAFT_1077 0.68 -0.2
1,116,428 - B158DRAFT_1077 0.68 -0.2
1,116,429 - B158DRAFT_1077 0.68 +0.0
1,116,478 - B158DRAFT_1077 0.74 -0.3
1,116,509 + B158DRAFT_1077 0.77 -0.4
1,116,509 + B158DRAFT_1077 0.77 -1.0
1,116,517 - B158DRAFT_1077 0.78 -0.5
1,116,517 - B158DRAFT_1077 0.78 -0.2
1,116,546 - B158DRAFT_1077 0.81 -0.1
1,116,546 - B158DRAFT_1077 0.81 +0.1
1,116,546 - B158DRAFT_1077 0.81 +1.0
1,116,556 - B158DRAFT_1077 0.82 +0.4
1,116,556 - B158DRAFT_1077 0.82 -0.1
1,116,584 + B158DRAFT_1077 0.85 +0.2
1,116,639 + -0.6
1,116,639 + -0.2
1,116,647 - -1.1
1,116,660 + +0.3
1,116,660 + -0.1
1,116,665 + -0.6
1,116,798 + B158DRAFT_1078 0.19 -0.4
1,116,899 + B158DRAFT_1078 0.45 -0.7
1,116,935 + B158DRAFT_1078 0.54 +0.2
1,117,033 + B158DRAFT_1078 0.79 -0.8
1,117,033 + B158DRAFT_1078 0.79 +0.1
1,117,041 - B158DRAFT_1078 0.81 -1.8
1,117,088 + -0.3
1,117,111 + +0.2
1,117,118 + -0.5
1,117,149 - +0.4
1,117,157 + -0.2
1,117,179 - -0.7
1,117,184 - +0.2
1,117,219 + -0.8
1,117,219 + +0.1
1,117,227 - +0.2
1,117,227 - +0.4
1,117,258 + -0.5
1,117,258 + -0.5
1,117,277 - -0.3
1,117,296 + +0.1

Or see this region's nucleotide sequence