Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1035

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1033 and B158DRAFT_1034 are separated by 83 nucleotidesB158DRAFT_1034 and B158DRAFT_1035 are separated by 213 nucleotidesB158DRAFT_1035 and B158DRAFT_1036 are separated by 21 nucleotides B158DRAFT_1033: B158DRAFT_1033 - trigger factor, at 1,069,744 to 1,071,042 _1033 B158DRAFT_1034: B158DRAFT_1034 - ATP-dependent Clp protease, proteolytic subunit ClpP, at 1,071,126 to 1,071,743 _1034 B158DRAFT_1035: B158DRAFT_1035 - hypothetical protein, at 1,071,957 to 1,073,306 _1035 B158DRAFT_1036: B158DRAFT_1036 - Calcineurin-like phosphoesterase., at 1,073,328 to 1,075,223 _1036 Position (kb) 1071 1072 1073 1074Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1071.092 kb on - strandat 1071.182 kb on + strandat 1071.182 kb on + strandat 1071.182 kb on + strandat 1071.190 kb on - strand, within B158DRAFT_1034at 1071.192 kb on + strand, within B158DRAFT_1034at 1071.195 kb on - strand, within B158DRAFT_1034at 1071.197 kb on + strand, within B158DRAFT_1034at 1071.383 kb on + strand, within B158DRAFT_1034at 1071.391 kb on - strand, within B158DRAFT_1034at 1071.396 kb on - strand, within B158DRAFT_1034at 1071.406 kb on + strand, within B158DRAFT_1034at 1071.439 kb on - strand, within B158DRAFT_1034at 1071.480 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.493 kb on - strand, within B158DRAFT_1034at 1071.655 kb on + strand, within B158DRAFT_1034at 1071.679 kb on + strand, within B158DRAFT_1034at 1071.687 kb on - strandat 1071.687 kb on - strandat 1071.692 kb on - strandat 1071.697 kb on + strandat 1071.745 kb on + strandat 1071.745 kb on + strandat 1071.755 kb on + strandat 1071.768 kb on - strandat 1071.791 kb on - strandat 1071.838 kb on + strandat 1071.846 kb on - strandat 1071.890 kb on - strandat 1071.911 kb on - strandat 1071.985 kb on + strandat 1072.062 kb on - strandat 1072.156 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.347 kb on + strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.357 kb on + strand, within B158DRAFT_1035at 1072.365 kb on - strand, within B158DRAFT_1035at 1072.365 kb on - strand, within B158DRAFT_1035at 1072.376 kb on + strand, within B158DRAFT_1035at 1072.403 kb on - strand, within B158DRAFT_1035at 1072.405 kb on + strand, within B158DRAFT_1035at 1072.413 kb on - strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.493 kb on - strand, within B158DRAFT_1035at 1072.493 kb on - strand, within B158DRAFT_1035at 1072.541 kb on - strand, within B158DRAFT_1035at 1072.714 kb on - strand, within B158DRAFT_1035at 1072.778 kb on - strand, within B158DRAFT_1035at 1072.822 kb on - strand, within B158DRAFT_1035at 1072.824 kb on + strand, within B158DRAFT_1035at 1072.837 kb on + strand, within B158DRAFT_1035at 1072.964 kb on - strand, within B158DRAFT_1035at 1072.980 kb on - strand, within B158DRAFT_1035at 1073.001 kb on + strand, within B158DRAFT_1035at 1073.137 kb on + strand, within B158DRAFT_1035at 1073.137 kb on + strand, within B158DRAFT_1035at 1073.137 kb on + strand, within B158DRAFT_1035at 1073.145 kb on - strand, within B158DRAFT_1035at 1073.257 kb on - strandat 1073.257 kb on - strandat 1073.313 kb on + strandat 1073.318 kb on + strandat 1073.325 kb on + strandat 1073.380 kb on + strandat 1073.417 kb on - strandat 1073.419 kb on + strandat 1073.419 kb on + strandat 1073.419 kb on + strandat 1073.419 kb on + strandat 1073.419 kb on + strandat 1073.419 kb on + strandat 1073.425 kb on + strandat 1073.427 kb on - strandat 1073.427 kb on - strandat 1073.443 kb on + strandat 1073.443 kb on + strandat 1073.445 kb on + strandat 1073.508 kb on + strandat 1073.516 kb on + strandat 1073.516 kb on + strandat 1073.662 kb on + strand, within B158DRAFT_1036at 1073.662 kb on + strand, within B158DRAFT_1036at 1073.662 kb on + strand, within B158DRAFT_1036at 1073.673 kb on - strand, within B158DRAFT_1036at 1073.690 kb on + strand, within B158DRAFT_1036at 1073.711 kb on + strand, within B158DRAFT_1036at 1073.759 kb on - strand, within B158DRAFT_1036at 1073.774 kb on - strand, within B158DRAFT_1036at 1073.799 kb on - strand, within B158DRAFT_1036at 1074.043 kb on - strand, within B158DRAFT_1036at 1074.069 kb on - strand, within B158DRAFT_1036at 1074.136 kb on + strand, within B158DRAFT_1036at 1074.136 kb on + strand, within B158DRAFT_1036at 1074.144 kb on - strand, within B158DRAFT_1036at 1074.149 kb on - strand, within B158DRAFT_1036at 1074.180 kb on - strand, within B158DRAFT_1036at 1074.227 kb on + strand, within B158DRAFT_1036at 1074.235 kb on - strand, within B158DRAFT_1036

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,071,092 - +0.0
1,071,182 + +0.8
1,071,182 + +3.0
1,071,182 + +0.7
1,071,190 - B158DRAFT_1034 0.10 +1.3
1,071,192 + B158DRAFT_1034 0.11 +1.2
1,071,195 - B158DRAFT_1034 0.11 +0.6
1,071,197 + B158DRAFT_1034 0.11 +0.6
1,071,383 + B158DRAFT_1034 0.42 +0.8
1,071,391 - B158DRAFT_1034 0.43 +0.6
1,071,396 - B158DRAFT_1034 0.44 +0.2
1,071,406 + B158DRAFT_1034 0.45 +0.8
1,071,439 - B158DRAFT_1034 0.51 +0.4
1,071,480 + B158DRAFT_1034 0.57 +0.6
1,071,485 + B158DRAFT_1034 0.58 +1.8
1,071,485 + B158DRAFT_1034 0.58 +0.4
1,071,485 + B158DRAFT_1034 0.58 +2.8
1,071,485 + B158DRAFT_1034 0.58 +0.4
1,071,493 - B158DRAFT_1034 0.59 +0.9
1,071,655 + B158DRAFT_1034 0.86 +0.4
1,071,679 + B158DRAFT_1034 0.89 +0.6
1,071,687 - +0.4
1,071,687 - +0.9
1,071,692 - +0.4
1,071,697 + +0.3
1,071,745 + +0.1
1,071,745 + -0.8
1,071,755 + -0.1
1,071,768 - -0.2
1,071,791 - +0.2
1,071,838 + -0.4
1,071,846 - -0.1
1,071,890 - -0.7
1,071,911 - -1.4
1,071,985 + -0.1
1,072,062 - +0.5
1,072,156 + B158DRAFT_1035 0.15 +0.5
1,072,342 + B158DRAFT_1035 0.29 +0.0
1,072,342 + B158DRAFT_1035 0.29 +0.1
1,072,342 + B158DRAFT_1035 0.29 -0.4
1,072,342 + B158DRAFT_1035 0.29 +0.1
1,072,347 + B158DRAFT_1035 0.29 -0.5
1,072,350 - B158DRAFT_1035 0.29 -0.2
1,072,350 - B158DRAFT_1035 0.29 -0.1
1,072,350 - B158DRAFT_1035 0.29 +0.2
1,072,350 - B158DRAFT_1035 0.29 -0.4
1,072,350 - B158DRAFT_1035 0.29 -0.8
1,072,355 - B158DRAFT_1035 0.29 -2.4
1,072,355 - B158DRAFT_1035 0.29 -0.9
1,072,355 - B158DRAFT_1035 0.29 -0.1
1,072,357 + B158DRAFT_1035 0.30 -0.2
1,072,365 - B158DRAFT_1035 0.30 +0.7
1,072,365 - B158DRAFT_1035 0.30 -0.0
1,072,376 + B158DRAFT_1035 0.31 -0.6
1,072,403 - B158DRAFT_1035 0.33 -0.1
1,072,405 + B158DRAFT_1035 0.33 +0.6
1,072,413 - B158DRAFT_1035 0.34 -0.1
1,072,485 + B158DRAFT_1035 0.39 +0.4
1,072,485 + B158DRAFT_1035 0.39 +0.3
1,072,485 + B158DRAFT_1035 0.39 +0.0
1,072,493 - B158DRAFT_1035 0.40 -0.1
1,072,493 - B158DRAFT_1035 0.40 -0.2
1,072,541 - B158DRAFT_1035 0.43 +0.5
1,072,714 - B158DRAFT_1035 0.56 +0.4
1,072,778 - B158DRAFT_1035 0.61 -0.5
1,072,822 - B158DRAFT_1035 0.64 +1.3
1,072,824 + B158DRAFT_1035 0.64 -0.4
1,072,837 + B158DRAFT_1035 0.65 +0.2
1,072,964 - B158DRAFT_1035 0.75 -0.1
1,072,980 - B158DRAFT_1035 0.76 -0.8
1,073,001 + B158DRAFT_1035 0.77 -0.3
1,073,137 + B158DRAFT_1035 0.87 -0.3
1,073,137 + B158DRAFT_1035 0.87 -0.6
1,073,137 + B158DRAFT_1035 0.87 -0.1
1,073,145 - B158DRAFT_1035 0.88 +0.3
1,073,257 - -0.2
1,073,257 - -1.7
1,073,313 + +0.4
1,073,318 + +1.0
1,073,325 + -0.4
1,073,380 + -1.7
1,073,417 - -0.0
1,073,419 + +0.5
1,073,419 + -0.6
1,073,419 + -0.5
1,073,419 + -0.8
1,073,419 + -0.0
1,073,419 + +0.1
1,073,425 + +0.6
1,073,427 - -0.5
1,073,427 - -0.1
1,073,443 + -0.7
1,073,443 + +0.2
1,073,445 + -0.4
1,073,508 + -1.1
1,073,516 + -0.5
1,073,516 + +0.3
1,073,662 + B158DRAFT_1036 0.18 +0.1
1,073,662 + B158DRAFT_1036 0.18 -0.1
1,073,662 + B158DRAFT_1036 0.18 -0.8
1,073,673 - B158DRAFT_1036 0.18 +0.0
1,073,690 + B158DRAFT_1036 0.19 -0.1
1,073,711 + B158DRAFT_1036 0.20 -0.3
1,073,759 - B158DRAFT_1036 0.23 +0.3
1,073,774 - B158DRAFT_1036 0.24 +0.5
1,073,799 - B158DRAFT_1036 0.25 -0.2
1,074,043 - B158DRAFT_1036 0.38 -0.5
1,074,069 - B158DRAFT_1036 0.39 -0.8
1,074,136 + B158DRAFT_1036 0.43 +0.0
1,074,136 + B158DRAFT_1036 0.43 -2.3
1,074,144 - B158DRAFT_1036 0.43 -0.4
1,074,149 - B158DRAFT_1036 0.43 -1.3
1,074,180 - B158DRAFT_1036 0.45 +0.4
1,074,227 + B158DRAFT_1036 0.47 -1.0
1,074,235 - B158DRAFT_1036 0.48 +0.1

Or see this region's nucleotide sequence