Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0982 and B158DRAFT_0983 are separated by 135 nucleotides B158DRAFT_0983 and B158DRAFT_0984 are separated by 127 nucleotides
B158DRAFT_0982: B158DRAFT_0982 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 1,014,500 to 1,016,569
_0982
B158DRAFT_0983: B158DRAFT_0983 - hypothetical protein, at 1,016,705 to 1,018,477
_0983
B158DRAFT_0984: B158DRAFT_0984 - lysine-2,3-aminomutase-related protein, at 1,018,605 to 1,019,636
_0984
Position (kb)
1016
1017
1018
1019 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1015.724 kb on + strand, within B158DRAFT_0982 at 1015.932 kb on + strand, within B158DRAFT_0982 at 1015.932 kb on + strand, within B158DRAFT_0982 at 1015.932 kb on + strand, within B158DRAFT_0982 at 1015.932 kb on + strand, within B158DRAFT_0982 at 1016.000 kb on + strand, within B158DRAFT_0982 at 1016.128 kb on + strand, within B158DRAFT_0982 at 1016.128 kb on + strand, within B158DRAFT_0982 at 1016.128 kb on + strand, within B158DRAFT_0982 at 1016.136 kb on - strand, within B158DRAFT_0982 at 1016.136 kb on - strand, within B158DRAFT_0982 at 1016.136 kb on - strand, within B158DRAFT_0982 at 1016.242 kb on - strand, within B158DRAFT_0982 at 1016.256 kb on - strand, within B158DRAFT_0982 at 1016.256 kb on - strand, within B158DRAFT_0982 at 1016.256 kb on - strand, within B158DRAFT_0982 at 1016.292 kb on - strand, within B158DRAFT_0982 at 1016.424 kb on + strand at 1016.424 kb on + strand at 1016.424 kb on + strand at 1016.424 kb on + strand at 1016.429 kb on + strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.432 kb on - strand at 1016.434 kb on + strand at 1016.441 kb on + strand at 1016.441 kb on + strand at 1016.517 kb on - strand at 1016.523 kb on + strand at 1016.591 kb on - strand at 1016.594 kb on + strand at 1016.602 kb on - strand at 1016.602 kb on - strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.772 kb on + strand at 1016.780 kb on - strand at 1016.780 kb on - strand at 1016.780 kb on - strand at 1016.782 kb on - strand at 1016.812 kb on + strand at 1016.812 kb on + strand at 1016.815 kb on - strand at 1016.833 kb on - strand at 1016.889 kb on - strand, within B158DRAFT_0983 at 1016.923 kb on + strand, within B158DRAFT_0983 at 1016.924 kb on + strand, within B158DRAFT_0983 at 1016.924 kb on + strand, within B158DRAFT_0983 at 1016.931 kb on - strand, within B158DRAFT_0983 at 1016.932 kb on - strand, within B158DRAFT_0983 at 1016.932 kb on - strand, within B158DRAFT_0983 at 1016.943 kb on + strand, within B158DRAFT_0983 at 1016.965 kb on + strand, within B158DRAFT_0983 at 1016.970 kb on + strand, within B158DRAFT_0983 at 1016.970 kb on + strand, within B158DRAFT_0983 at 1016.973 kb on - strand, within B158DRAFT_0983 at 1016.978 kb on + strand, within B158DRAFT_0983 at 1016.986 kb on + strand, within B158DRAFT_0983 at 1016.989 kb on - strand, within B158DRAFT_0983 at 1016.994 kb on - strand, within B158DRAFT_0983 at 1016.994 kb on - strand, within B158DRAFT_0983 at 1016.994 kb on - strand, within B158DRAFT_0983 at 1017.013 kb on + strand, within B158DRAFT_0983 at 1017.018 kb on + strand, within B158DRAFT_0983 at 1017.019 kb on + strand, within B158DRAFT_0983 at 1017.019 kb on + strand, within B158DRAFT_0983 at 1017.019 kb on + strand, within B158DRAFT_0983 at 1017.019 kb on + strand, within B158DRAFT_0983 at 1017.026 kb on + strand, within B158DRAFT_0983 at 1017.026 kb on - strand, within B158DRAFT_0983 at 1017.027 kb on - strand, within B158DRAFT_0983 at 1017.027 kb on - strand, within B158DRAFT_0983 at 1017.027 kb on - strand, within B158DRAFT_0983 at 1017.027 kb on - strand, within B158DRAFT_0983 at 1017.032 kb on - strand, within B158DRAFT_0983 at 1017.063 kb on + strand, within B158DRAFT_0983 at 1017.150 kb on + strand, within B158DRAFT_0983 at 1017.150 kb on + strand, within B158DRAFT_0983 at 1017.150 kb on + strand, within B158DRAFT_0983 at 1017.150 kb on + strand, within B158DRAFT_0983 at 1017.158 kb on - strand, within B158DRAFT_0983 at 1017.158 kb on - strand, within B158DRAFT_0983 at 1017.158 kb on - strand, within B158DRAFT_0983 at 1017.158 kb on - strand, within B158DRAFT_0983 at 1017.158 kb on - strand, within B158DRAFT_0983 at 1017.231 kb on - strand, within B158DRAFT_0983 at 1017.262 kb on + strand, within B158DRAFT_0983 at 1017.262 kb on + strand, within B158DRAFT_0983 at 1017.296 kb on - strand, within B158DRAFT_0983 at 1017.331 kb on + strand, within B158DRAFT_0983 at 1017.357 kb on + strand, within B158DRAFT_0983 at 1017.365 kb on - strand, within B158DRAFT_0983 at 1017.390 kb on + strand, within B158DRAFT_0983 at 1017.412 kb on + strand, within B158DRAFT_0983 at 1017.412 kb on + strand, within B158DRAFT_0983 at 1017.422 kb on - strand, within B158DRAFT_0983 at 1017.462 kb on + strand, within B158DRAFT_0983 at 1017.636 kb on + strand, within B158DRAFT_0983 at 1017.641 kb on + strand, within B158DRAFT_0983 at 1017.642 kb on - strand, within B158DRAFT_0983 at 1017.646 kb on + strand, within B158DRAFT_0983 at 1017.649 kb on - strand, within B158DRAFT_0983 at 1017.747 kb on - strand, within B158DRAFT_0983 at 1017.747 kb on - strand, within B158DRAFT_0983 at 1017.749 kb on - strand, within B158DRAFT_0983 at 1017.749 kb on - strand, within B158DRAFT_0983 at 1017.766 kb on + strand, within B158DRAFT_0983 at 1017.774 kb on - strand, within B158DRAFT_0983 at 1017.795 kb on - strand, within B158DRAFT_0983 at 1017.936 kb on + strand, within B158DRAFT_0983 at 1018.034 kb on + strand, within B158DRAFT_0983 at 1018.042 kb on - strand, within B158DRAFT_0983 at 1018.071 kb on - strand, within B158DRAFT_0983 at 1018.098 kb on - strand, within B158DRAFT_0983 at 1018.109 kb on - strand, within B158DRAFT_0983 at 1018.148 kb on + strand, within B158DRAFT_0983 at 1018.155 kb on + strand, within B158DRAFT_0983 at 1018.155 kb on + strand, within B158DRAFT_0983 at 1018.155 kb on + strand, within B158DRAFT_0983 at 1018.163 kb on - strand, within B158DRAFT_0983 at 1018.250 kb on + strand, within B158DRAFT_0983 at 1018.250 kb on + strand, within B158DRAFT_0983 at 1018.250 kb on + strand, within B158DRAFT_0983 at 1018.250 kb on + strand, within B158DRAFT_0983 at 1018.255 kb on + strand, within B158DRAFT_0983 at 1018.292 kb on + strand, within B158DRAFT_0983 at 1018.306 kb on + strand at 1018.352 kb on - strand at 1018.352 kb on - strand at 1018.379 kb on + strand at 1018.411 kb on - strand at 1018.466 kb on + strand at 1018.467 kb on + strand at 1018.475 kb on - strand at 1018.485 kb on + strand at 1018.486 kb on + strand at 1018.491 kb on + strand at 1018.494 kb on - strand at 1018.521 kb on + strand at 1018.788 kb on + strand, within B158DRAFT_0984 at 1018.881 kb on + strand, within B158DRAFT_0984 at 1018.897 kb on + strand, within B158DRAFT_0984 at 1018.956 kb on + strand, within B158DRAFT_0984 at 1018.956 kb on + strand, within B158DRAFT_0984 at 1018.956 kb on + strand, within B158DRAFT_0984 at 1018.964 kb on - strand, within B158DRAFT_0984 at 1018.977 kb on + strand, within B158DRAFT_0984 at 1018.977 kb on + strand, within B158DRAFT_0984 at 1018.977 kb on + strand, within B158DRAFT_0984 at 1018.977 kb on + strand, within B158DRAFT_0984 at 1018.982 kb on + strand, within B158DRAFT_0984 at 1018.985 kb on - strand, within B158DRAFT_0984 at 1018.985 kb on - strand, within B158DRAFT_0984 at 1018.990 kb on - strand, within B158DRAFT_0984 at 1019.001 kb on + strand, within B158DRAFT_0984 at 1019.004 kb on - strand, within B158DRAFT_0984 at 1019.006 kb on + strand, within B158DRAFT_0984 at 1019.009 kb on - strand, within B158DRAFT_0984 at 1019.020 kb on + strand, within B158DRAFT_0984 at 1019.069 kb on + strand, within B158DRAFT_0984 at 1019.071 kb on + strand, within B158DRAFT_0984 at 1019.127 kb on - strand, within B158DRAFT_0984 at 1019.217 kb on - strand, within B158DRAFT_0984 at 1019.393 kb on - strand, within B158DRAFT_0984
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,015,724 + B158DRAFT_0982 0.59 +0.0 1,015,932 + B158DRAFT_0982 0.69 +0.4 1,015,932 + B158DRAFT_0982 0.69 +0.6 1,015,932 + B158DRAFT_0982 0.69 +0.6 1,015,932 + B158DRAFT_0982 0.69 +0.6 1,016,000 + B158DRAFT_0982 0.72 +1.1 1,016,128 + B158DRAFT_0982 0.79 -0.3 1,016,128 + B158DRAFT_0982 0.79 +0.3 1,016,128 + B158DRAFT_0982 0.79 +1.6 1,016,136 - B158DRAFT_0982 0.79 -0.0 1,016,136 - B158DRAFT_0982 0.79 +0.6 1,016,136 - B158DRAFT_0982 0.79 +0.2 1,016,242 - B158DRAFT_0982 0.84 +0.3 1,016,256 - B158DRAFT_0982 0.85 +0.1 1,016,256 - B158DRAFT_0982 0.85 +0.7 1,016,256 - B158DRAFT_0982 0.85 -1.5 1,016,292 - B158DRAFT_0982 0.87 -0.5 1,016,424 + +0.5 1,016,424 + +0.1 1,016,424 + +1.1 1,016,424 + +0.5 1,016,429 + +0.5 1,016,432 - +1.4 1,016,432 - -0.0 1,016,432 - +0.7 1,016,432 - +0.1 1,016,432 - +0.1 1,016,432 - +0.3 1,016,432 - +0.3 1,016,434 + +0.5 1,016,441 + -0.5 1,016,441 + +0.3 1,016,517 - -0.4 1,016,523 + +0.0 1,016,591 - +0.2 1,016,594 + -0.1 1,016,602 - -1.3 1,016,602 - +0.6 1,016,772 + -0.4 1,016,772 + -0.7 1,016,772 + -0.5 1,016,772 + -0.2 1,016,772 + +0.1 1,016,772 + -0.5 1,016,772 + -0.9 1,016,780 - +0.6 1,016,780 - +0.1 1,016,780 - -0.5 1,016,782 - -0.5 1,016,812 + +0.4 1,016,812 + +0.2 1,016,815 - +0.1 1,016,833 - -0.1 1,016,889 - B158DRAFT_0983 0.10 -0.2 1,016,923 + B158DRAFT_0983 0.12 +0.1 1,016,924 + B158DRAFT_0983 0.12 +0.0 1,016,924 + B158DRAFT_0983 0.12 +0.5 1,016,931 - B158DRAFT_0983 0.13 -0.1 1,016,932 - B158DRAFT_0983 0.13 +0.4 1,016,932 - B158DRAFT_0983 0.13 -0.1 1,016,943 + B158DRAFT_0983 0.13 -1.2 1,016,965 + B158DRAFT_0983 0.15 -0.3 1,016,970 + B158DRAFT_0983 0.15 -0.7 1,016,970 + B158DRAFT_0983 0.15 +0.5 1,016,973 - B158DRAFT_0983 0.15 -0.3 1,016,978 + B158DRAFT_0983 0.15 +0.5 1,016,986 + B158DRAFT_0983 0.16 -0.2 1,016,989 - B158DRAFT_0983 0.16 +0.2 1,016,994 - B158DRAFT_0983 0.16 -0.1 1,016,994 - B158DRAFT_0983 0.16 -0.3 1,016,994 - B158DRAFT_0983 0.16 +0.2 1,017,013 + B158DRAFT_0983 0.17 -0.2 1,017,018 + B158DRAFT_0983 0.18 -0.1 1,017,019 + B158DRAFT_0983 0.18 +0.1 1,017,019 + B158DRAFT_0983 0.18 +0.0 1,017,019 + B158DRAFT_0983 0.18 +0.7 1,017,019 + B158DRAFT_0983 0.18 +1.2 1,017,026 + B158DRAFT_0983 0.18 +1.0 1,017,026 - B158DRAFT_0983 0.18 -0.3 1,017,027 - B158DRAFT_0983 0.18 +0.2 1,017,027 - B158DRAFT_0983 0.18 +0.2 1,017,027 - B158DRAFT_0983 0.18 +0.3 1,017,027 - B158DRAFT_0983 0.18 -0.0 1,017,032 - B158DRAFT_0983 0.18 -0.2 1,017,063 + B158DRAFT_0983 0.20 -0.1 1,017,150 + B158DRAFT_0983 0.25 -0.6 1,017,150 + B158DRAFT_0983 0.25 -1.4 1,017,150 + B158DRAFT_0983 0.25 +0.1 1,017,150 + B158DRAFT_0983 0.25 -0.2 1,017,158 - B158DRAFT_0983 0.26 +0.7 1,017,158 - B158DRAFT_0983 0.26 -2.2 1,017,158 - B158DRAFT_0983 0.26 -0.2 1,017,158 - B158DRAFT_0983 0.26 +0.9 1,017,158 - B158DRAFT_0983 0.26 -0.6 1,017,231 - B158DRAFT_0983 0.30 -0.0 1,017,262 + B158DRAFT_0983 0.31 -0.1 1,017,262 + B158DRAFT_0983 0.31 -0.4 1,017,296 - B158DRAFT_0983 0.33 +0.1 1,017,331 + B158DRAFT_0983 0.35 +0.5 1,017,357 + B158DRAFT_0983 0.37 -0.1 1,017,365 - B158DRAFT_0983 0.37 -0.3 1,017,390 + B158DRAFT_0983 0.39 +0.1 1,017,412 + B158DRAFT_0983 0.40 -0.3 1,017,412 + B158DRAFT_0983 0.40 +0.1 1,017,422 - B158DRAFT_0983 0.40 +0.1 1,017,462 + B158DRAFT_0983 0.43 +0.6 1,017,636 + B158DRAFT_0983 0.53 -0.0 1,017,641 + B158DRAFT_0983 0.53 +0.1 1,017,642 - B158DRAFT_0983 0.53 -0.4 1,017,646 + B158DRAFT_0983 0.53 -0.1 1,017,649 - B158DRAFT_0983 0.53 +0.3 1,017,747 - B158DRAFT_0983 0.59 +0.1 1,017,747 - B158DRAFT_0983 0.59 +0.6 1,017,749 - B158DRAFT_0983 0.59 +0.4 1,017,749 - B158DRAFT_0983 0.59 +0.2 1,017,766 + B158DRAFT_0983 0.60 +0.1 1,017,774 - B158DRAFT_0983 0.60 +0.4 1,017,795 - B158DRAFT_0983 0.61 +1.0 1,017,936 + B158DRAFT_0983 0.69 -0.1 1,018,034 + B158DRAFT_0983 0.75 +2.0 1,018,042 - B158DRAFT_0983 0.75 +0.4 1,018,071 - B158DRAFT_0983 0.77 -0.3 1,018,098 - B158DRAFT_0983 0.79 +0.0 1,018,109 - B158DRAFT_0983 0.79 +1.5 1,018,148 + B158DRAFT_0983 0.81 -0.4 1,018,155 + B158DRAFT_0983 0.82 +0.1 1,018,155 + B158DRAFT_0983 0.82 -0.7 1,018,155 + B158DRAFT_0983 0.82 -1.6 1,018,163 - B158DRAFT_0983 0.82 +0.2 1,018,250 + B158DRAFT_0983 0.87 -0.2 1,018,250 + B158DRAFT_0983 0.87 +0.2 1,018,250 + B158DRAFT_0983 0.87 -0.4 1,018,250 + B158DRAFT_0983 0.87 -0.4 1,018,255 + B158DRAFT_0983 0.87 +0.3 1,018,292 + B158DRAFT_0983 0.90 +0.2 1,018,306 + -0.7 1,018,352 - +0.2 1,018,352 - +0.0 1,018,379 + -0.1 1,018,411 - -0.3 1,018,466 + +0.4 1,018,467 + -0.2 1,018,475 - -0.9 1,018,485 + -0.1 1,018,486 + +0.4 1,018,491 + -0.5 1,018,494 - -0.0 1,018,521 + -0.0 1,018,788 + B158DRAFT_0984 0.18 -0.7 1,018,881 + B158DRAFT_0984 0.27 +0.3 1,018,897 + B158DRAFT_0984 0.28 +1.4 1,018,956 + B158DRAFT_0984 0.34 -0.2 1,018,956 + B158DRAFT_0984 0.34 -0.1 1,018,956 + B158DRAFT_0984 0.34 -0.3 1,018,964 - B158DRAFT_0984 0.35 -0.5 1,018,977 + B158DRAFT_0984 0.36 -0.1 1,018,977 + B158DRAFT_0984 0.36 -0.4 1,018,977 + B158DRAFT_0984 0.36 -0.6 1,018,977 + B158DRAFT_0984 0.36 -0.3 1,018,982 + B158DRAFT_0984 0.37 -0.1 1,018,985 - B158DRAFT_0984 0.37 -0.6 1,018,985 - B158DRAFT_0984 0.37 -0.1 1,018,990 - B158DRAFT_0984 0.37 -0.5 1,019,001 + B158DRAFT_0984 0.38 -0.6 1,019,004 - B158DRAFT_0984 0.39 -0.8 1,019,006 + B158DRAFT_0984 0.39 -0.0 1,019,009 - B158DRAFT_0984 0.39 -0.2 1,019,020 + B158DRAFT_0984 0.40 -0.0 1,019,069 + B158DRAFT_0984 0.45 -0.8 1,019,071 + B158DRAFT_0984 0.45 -0.2 1,019,127 - B158DRAFT_0984 0.51 -0.6 1,019,217 - B158DRAFT_0984 0.59 +0.7 1,019,393 - B158DRAFT_0984 0.76 -0.5
Or see this region's nucleotide sequence