Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0689 and B158DRAFT_0690 overlap by 1 nucleotides B158DRAFT_0690 and B158DRAFT_0691 overlap by 1 nucleotides
B158DRAFT_0689: B158DRAFT_0689 - general secretion pathway protein D, at 690,239 to 692,371
_0689
B158DRAFT_0690: B158DRAFT_0690 - general secretory pathway protein E, at 692,371 to 693,900
_0690
B158DRAFT_0691: B158DRAFT_0691 - general secretion pathway protein F, at 693,900 to 695,123
_0691
Position (kb) 692
693
694 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 691.407 kb on - strand, within B158DRAFT_0689 at 691.407 kb on - strand, within B158DRAFT_0689 at 691.419 kb on + strand, within B158DRAFT_0689 at 691.427 kb on - strand, within B158DRAFT_0689 at 691.472 kb on - strand, within B158DRAFT_0689 at 691.587 kb on + strand, within B158DRAFT_0689 at 691.604 kb on + strand, within B158DRAFT_0689 at 691.612 kb on - strand, within B158DRAFT_0689 at 691.621 kb on - strand, within B158DRAFT_0689 at 691.623 kb on + strand, within B158DRAFT_0689 at 691.628 kb on + strand, within B158DRAFT_0689 at 691.652 kb on - strand, within B158DRAFT_0689 at 691.659 kb on + strand, within B158DRAFT_0689 at 691.659 kb on + strand, within B158DRAFT_0689 at 691.659 kb on + strand, within B158DRAFT_0689 at 691.659 kb on + strand, within B158DRAFT_0689 at 691.667 kb on - strand, within B158DRAFT_0689 at 691.667 kb on - strand, within B158DRAFT_0689 at 691.667 kb on - strand, within B158DRAFT_0689 at 691.727 kb on + strand, within B158DRAFT_0689 at 691.794 kb on + strand, within B158DRAFT_0689 at 691.802 kb on - strand, within B158DRAFT_0689 at 691.802 kb on - strand, within B158DRAFT_0689 at 692.154 kb on + strand, within B158DRAFT_0689 at 692.285 kb on - strand at 692.303 kb on + strand at 692.311 kb on - strand at 692.332 kb on + strand at 692.356 kb on + strand at 692.634 kb on + strand, within B158DRAFT_0690 at 692.634 kb on + strand, within B158DRAFT_0690 at 692.642 kb on + strand, within B158DRAFT_0690 at 692.642 kb on - strand, within B158DRAFT_0690 at 692.686 kb on + strand, within B158DRAFT_0690 at 692.771 kb on + strand, within B158DRAFT_0690 at 693.161 kb on + strand, within B158DRAFT_0690 at 693.298 kb on - strand, within B158DRAFT_0690 at 693.308 kb on - strand, within B158DRAFT_0690 at 693.438 kb on - strand, within B158DRAFT_0690 at 693.509 kb on - strand, within B158DRAFT_0690 at 693.517 kb on - strand, within B158DRAFT_0690 at 693.553 kb on + strand, within B158DRAFT_0690 at 693.581 kb on - strand, within B158DRAFT_0690 at 693.640 kb on - strand, within B158DRAFT_0690 at 693.768 kb on + strand at 693.814 kb on - strand at 694.136 kb on + strand, within B158DRAFT_0691 at 694.136 kb on + strand, within B158DRAFT_0691 at 694.136 kb on + strand, within B158DRAFT_0691 at 694.136 kb on + strand, within B158DRAFT_0691 at 694.136 kb on + strand, within B158DRAFT_0691 at 694.136 kb on + strand, within B158DRAFT_0691 at 694.144 kb on - strand, within B158DRAFT_0691 at 694.144 kb on - strand, within B158DRAFT_0691 at 694.144 kb on - strand, within B158DRAFT_0691 at 694.298 kb on + strand, within B158DRAFT_0691 at 694.323 kb on - strand, within B158DRAFT_0691 at 694.520 kb on - strand, within B158DRAFT_0691 at 694.584 kb on + strand, within B158DRAFT_0691 at 694.739 kb on - strand, within B158DRAFT_0691 at 694.881 kb on - strand, within B158DRAFT_0691
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 691,407 - B158DRAFT_0689 0.55 -0.6 691,407 - B158DRAFT_0689 0.55 -0.3 691,419 + B158DRAFT_0689 0.55 -2.3 691,427 - B158DRAFT_0689 0.56 -1.8 691,472 - B158DRAFT_0689 0.58 -2.3 691,587 + B158DRAFT_0689 0.63 -0.9 691,604 + B158DRAFT_0689 0.64 +0.1 691,612 - B158DRAFT_0689 0.64 +0.1 691,621 - B158DRAFT_0689 0.65 -1.1 691,623 + B158DRAFT_0689 0.65 -1.1 691,628 + B158DRAFT_0689 0.65 -0.3 691,652 - B158DRAFT_0689 0.66 +0.5 691,659 + B158DRAFT_0689 0.67 -1.1 691,659 + B158DRAFT_0689 0.67 -0.6 691,659 + B158DRAFT_0689 0.67 -0.3 691,659 + B158DRAFT_0689 0.67 -0.5 691,667 - B158DRAFT_0689 0.67 -3.0 691,667 - B158DRAFT_0689 0.67 -0.3 691,667 - B158DRAFT_0689 0.67 -0.1 691,727 + B158DRAFT_0689 0.70 -0.7 691,794 + B158DRAFT_0689 0.73 -0.5 691,802 - B158DRAFT_0689 0.73 -0.7 691,802 - B158DRAFT_0689 0.73 -0.7 692,154 + B158DRAFT_0689 0.90 +0.5 692,285 - -1.4 692,303 + -0.3 692,311 - -0.7 692,332 + -0.2 692,356 + -0.8 692,634 + B158DRAFT_0690 0.17 -1.1 692,634 + B158DRAFT_0690 0.17 +0.5 692,642 + B158DRAFT_0690 0.18 -0.7 692,642 - B158DRAFT_0690 0.18 -1.4 692,686 + B158DRAFT_0690 0.21 -0.7 692,771 + B158DRAFT_0690 0.26 -0.7 693,161 + B158DRAFT_0690 0.52 -0.5 693,298 - B158DRAFT_0690 0.61 -0.9 693,308 - B158DRAFT_0690 0.61 +0.5 693,438 - B158DRAFT_0690 0.70 -1.3 693,509 - B158DRAFT_0690 0.74 +1.1 693,517 - B158DRAFT_0690 0.75 +0.1 693,553 + B158DRAFT_0690 0.77 -0.3 693,581 - B158DRAFT_0690 0.79 -1.5 693,640 - B158DRAFT_0690 0.83 -0.7 693,768 + -0.5 693,814 - -0.9 694,136 + B158DRAFT_0691 0.19 -2.2 694,136 + B158DRAFT_0691 0.19 -1.7 694,136 + B158DRAFT_0691 0.19 -2.0 694,136 + B158DRAFT_0691 0.19 -2.0 694,136 + B158DRAFT_0691 0.19 -0.3 694,136 + B158DRAFT_0691 0.19 -0.3 694,144 - B158DRAFT_0691 0.20 -0.9 694,144 - B158DRAFT_0691 0.20 -0.9 694,144 - B158DRAFT_0691 0.20 -2.4 694,298 + B158DRAFT_0691 0.33 -0.7 694,323 - B158DRAFT_0691 0.35 -1.4 694,520 - B158DRAFT_0691 0.51 -0.9 694,584 + B158DRAFT_0691 0.56 +0.1 694,739 - B158DRAFT_0691 0.69 -2.2 694,881 - B158DRAFT_0691 0.80 -1.6
Or see this region's nucleotide sequence