Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0688

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0686 and B158DRAFT_0687 are separated by 37 nucleotidesB158DRAFT_0687 and B158DRAFT_0688 are separated by 140 nucleotidesB158DRAFT_0688 and B158DRAFT_0689 overlap by 4 nucleotides B158DRAFT_0686: B158DRAFT_0686 - Disulfide bond chaperones of the HSP33 family, at 687,852 to 688,724 _0686 B158DRAFT_0687: B158DRAFT_0687 - heat shock protein Hsp15, at 688,762 to 689,148 _0687 B158DRAFT_0688: B158DRAFT_0688 - type II secretion system protein C (GspC), at 689,289 to 690,242 _0688 B158DRAFT_0689: B158DRAFT_0689 - general secretion pathway protein D, at 690,239 to 692,371 _0689 Position (kb) 689 690 691Strain fitness (log2 ratio) -3 -2 -1 0 1at 688.294 kb on - strand, within B158DRAFT_0686at 688.294 kb on - strand, within B158DRAFT_0686at 688.294 kb on - strand, within B158DRAFT_0686at 688.307 kb on + strand, within B158DRAFT_0686at 688.360 kb on + strand, within B158DRAFT_0686at 688.370 kb on + strand, within B158DRAFT_0686at 688.375 kb on + strand, within B158DRAFT_0686at 688.378 kb on - strand, within B158DRAFT_0686at 688.442 kb on + strand, within B158DRAFT_0686at 688.454 kb on + strand, within B158DRAFT_0686at 688.460 kb on - strand, within B158DRAFT_0686at 688.511 kb on + strand, within B158DRAFT_0686at 688.530 kb on + strand, within B158DRAFT_0686at 688.566 kb on + strand, within B158DRAFT_0686at 688.579 kb on - strand, within B158DRAFT_0686at 688.591 kb on + strand, within B158DRAFT_0686at 688.596 kb on - strand, within B158DRAFT_0686at 688.642 kb on + strandat 688.662 kb on + strandat 688.715 kb on + strandat 688.723 kb on - strandat 688.751 kb on + strandat 688.767 kb on - strandat 688.827 kb on + strand, within B158DRAFT_0687at 688.827 kb on + strand, within B158DRAFT_0687at 688.827 kb on - strand, within B158DRAFT_0687at 688.835 kb on - strand, within B158DRAFT_0687at 688.940 kb on + strand, within B158DRAFT_0687at 688.940 kb on + strand, within B158DRAFT_0687at 688.940 kb on + strand, within B158DRAFT_0687at 688.945 kb on + strand, within B158DRAFT_0687at 688.947 kb on - strand, within B158DRAFT_0687at 688.968 kb on + strand, within B158DRAFT_0687at 689.010 kb on - strand, within B158DRAFT_0687at 689.018 kb on - strand, within B158DRAFT_0687at 689.067 kb on - strand, within B158DRAFT_0687at 689.105 kb on + strand, within B158DRAFT_0687at 689.105 kb on + strand, within B158DRAFT_0687at 689.105 kb on + strand, within B158DRAFT_0687at 689.105 kb on + strand, within B158DRAFT_0687at 689.105 kb on + strand, within B158DRAFT_0687at 689.113 kb on - strandat 689.113 kb on - strandat 689.113 kb on - strandat 689.113 kb on - strandat 689.113 kb on - strandat 689.113 kb on - strandat 689.113 kb on - strandat 689.126 kb on - strandat 689.172 kb on + strandat 689.176 kb on + strandat 689.259 kb on + strandat 689.441 kb on - strand, within B158DRAFT_0688at 689.501 kb on - strand, within B158DRAFT_0688at 689.619 kb on + strand, within B158DRAFT_0688at 689.725 kb on + strand, within B158DRAFT_0688at 689.725 kb on + strand, within B158DRAFT_0688at 689.725 kb on - strand, within B158DRAFT_0688at 689.834 kb on + strand, within B158DRAFT_0688at 689.834 kb on + strand, within B158DRAFT_0688at 689.842 kb on - strand, within B158DRAFT_0688at 689.842 kb on - strand, within B158DRAFT_0688at 689.842 kb on - strand, within B158DRAFT_0688at 689.866 kb on + strand, within B158DRAFT_0688at 689.877 kb on + strand, within B158DRAFT_0688at 689.877 kb on + strand, within B158DRAFT_0688at 690.052 kb on - strand, within B158DRAFT_0688at 690.094 kb on + strand, within B158DRAFT_0688at 690.114 kb on + strand, within B158DRAFT_0688at 690.119 kb on + strand, within B158DRAFT_0688at 690.124 kb on + strand, within B158DRAFT_0688at 690.124 kb on + strand, within B158DRAFT_0688at 690.154 kb on + strandat 690.166 kb on + strandat 690.319 kb on - strandat 690.348 kb on + strandat 690.348 kb on + strandat 690.348 kb on + strandat 690.428 kb on - strandat 690.441 kb on + strandat 690.441 kb on + strandat 690.441 kb on + strandat 690.524 kb on + strand, within B158DRAFT_0689at 690.526 kb on - strand, within B158DRAFT_0689at 690.650 kb on + strand, within B158DRAFT_0689at 690.728 kb on - strand, within B158DRAFT_0689at 690.756 kb on + strand, within B158DRAFT_0689at 690.777 kb on + strand, within B158DRAFT_0689at 690.873 kb on + strand, within B158DRAFT_0689at 690.987 kb on + strand, within B158DRAFT_0689at 690.987 kb on + strand, within B158DRAFT_0689at 690.987 kb on + strand, within B158DRAFT_0689at 690.987 kb on + strand, within B158DRAFT_0689at 690.995 kb on - strand, within B158DRAFT_0689at 691.024 kb on + strand, within B158DRAFT_0689at 691.024 kb on + strand, within B158DRAFT_0689at 691.032 kb on + strand, within B158DRAFT_0689at 691.032 kb on - strand, within B158DRAFT_0689at 691.032 kb on - strand, within B158DRAFT_0689at 691.110 kb on - strand, within B158DRAFT_0689

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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688,294 - B158DRAFT_0686 0.51 -0.1
688,294 - B158DRAFT_0686 0.51 -1.1
688,294 - B158DRAFT_0686 0.51 -0.8
688,307 + B158DRAFT_0686 0.52 +0.3
688,360 + B158DRAFT_0686 0.58 +0.0
688,370 + B158DRAFT_0686 0.59 +0.2
688,375 + B158DRAFT_0686 0.60 -0.0
688,378 - B158DRAFT_0686 0.60 -0.3
688,442 + B158DRAFT_0686 0.68 -0.1
688,454 + B158DRAFT_0686 0.69 -0.7
688,460 - B158DRAFT_0686 0.70 -0.8
688,511 + B158DRAFT_0686 0.75 +0.2
688,530 + B158DRAFT_0686 0.78 -0.3
688,566 + B158DRAFT_0686 0.82 -0.4
688,579 - B158DRAFT_0686 0.83 +0.4
688,591 + B158DRAFT_0686 0.85 +0.0
688,596 - B158DRAFT_0686 0.85 -0.1
688,642 + -1.4
688,662 + +0.8
688,715 + -0.0
688,723 - -0.2
688,751 + -0.2
688,767 - -0.3
688,827 + B158DRAFT_0687 0.17 +0.2
688,827 + B158DRAFT_0687 0.17 -0.6
688,827 - B158DRAFT_0687 0.17 -1.7
688,835 - B158DRAFT_0687 0.19 -0.2
688,940 + B158DRAFT_0687 0.46 +1.5
688,940 + B158DRAFT_0687 0.46 +0.0
688,940 + B158DRAFT_0687 0.46 +1.3
688,945 + B158DRAFT_0687 0.47 +0.3
688,947 - B158DRAFT_0687 0.48 +0.8
688,968 + B158DRAFT_0687 0.53 -0.6
689,010 - B158DRAFT_0687 0.64 +0.0
689,018 - B158DRAFT_0687 0.66 -0.1
689,067 - B158DRAFT_0687 0.79 -0.2
689,105 + B158DRAFT_0687 0.89 -0.6
689,105 + B158DRAFT_0687 0.89 -0.1
689,105 + B158DRAFT_0687 0.89 +0.1
689,105 + B158DRAFT_0687 0.89 -0.0
689,105 + B158DRAFT_0687 0.89 -0.2
689,113 - -0.1
689,113 - -0.2
689,113 - +0.6
689,113 - +0.2
689,113 - -0.3
689,113 - +0.4
689,113 - -0.0
689,126 - +0.1
689,172 + -0.3
689,176 + -0.4
689,259 + -0.1
689,441 - B158DRAFT_0688 0.16 -0.9
689,501 - B158DRAFT_0688 0.22 +0.1
689,619 + B158DRAFT_0688 0.35 -0.5
689,725 + B158DRAFT_0688 0.46 -0.2
689,725 + B158DRAFT_0688 0.46 +0.1
689,725 - B158DRAFT_0688 0.46 -1.1
689,834 + B158DRAFT_0688 0.57 -3.0
689,834 + B158DRAFT_0688 0.57 -0.0
689,842 - B158DRAFT_0688 0.58 -1.7
689,842 - B158DRAFT_0688 0.58 -2.7
689,842 - B158DRAFT_0688 0.58 -0.5
689,866 + B158DRAFT_0688 0.60 -1.9
689,877 + B158DRAFT_0688 0.62 +0.1
689,877 + B158DRAFT_0688 0.62 -1.0
690,052 - B158DRAFT_0688 0.80 -1.8
690,094 + B158DRAFT_0688 0.84 -0.2
690,114 + B158DRAFT_0688 0.86 -0.5
690,119 + B158DRAFT_0688 0.87 -1.2
690,124 + B158DRAFT_0688 0.88 -0.5
690,124 + B158DRAFT_0688 0.88 -0.8
690,154 + -1.2
690,166 + -0.5
690,319 - -0.2
690,348 + -1.2
690,348 + -1.4
690,348 + +0.1
690,428 - -0.5
690,441 + -2.2
690,441 + -0.2
690,441 + -1.8
690,524 + B158DRAFT_0689 0.13 +0.1
690,526 - B158DRAFT_0689 0.13 -2.1
690,650 + B158DRAFT_0689 0.19 -0.5
690,728 - B158DRAFT_0689 0.23 -0.3
690,756 + B158DRAFT_0689 0.24 -1.4
690,777 + B158DRAFT_0689 0.25 -0.3
690,873 + B158DRAFT_0689 0.30 -1.9
690,987 + B158DRAFT_0689 0.35 -0.5
690,987 + B158DRAFT_0689 0.35 -1.5
690,987 + B158DRAFT_0689 0.35 -1.5
690,987 + B158DRAFT_0689 0.35 -0.5
690,995 - B158DRAFT_0689 0.35 -2.3
691,024 + B158DRAFT_0689 0.37 +0.1
691,024 + B158DRAFT_0689 0.37 +0.1
691,032 + B158DRAFT_0689 0.37 -0.7
691,032 - B158DRAFT_0689 0.37 -0.1
691,032 - B158DRAFT_0689 0.37 -0.9
691,110 - B158DRAFT_0689 0.41 -0.5

Or see this region's nucleotide sequence