Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0072

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0070 and B158DRAFT_0071 are separated by 75 nucleotidesB158DRAFT_0071 and B158DRAFT_0072 are separated by 186 nucleotidesB158DRAFT_0072 and B158DRAFT_0073 are separated by 33 nucleotidesB158DRAFT_0073 and B158DRAFT_0074 are separated by 133 nucleotides B158DRAFT_0070: B158DRAFT_0070 - hypothetical protein, at 67,281 to 67,727 _0070 B158DRAFT_0071: B158DRAFT_0071 - hypothetical protein, at 67,803 to 68,372 _0071 B158DRAFT_0072: B158DRAFT_0072 - Peptidase family M48., at 68,559 to 69,359 _0072 B158DRAFT_0073: B158DRAFT_0073 - Glutathione S-transferase, at 69,393 to 70,055 _0073 B158DRAFT_0074: B158DRAFT_0074 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 70,189 to 70,671 _0074 Position (kb) 68 69 70Strain fitness (log2 ratio) -2 -1 0 1at 67.582 kb on - strand, within B158DRAFT_0070at 67.614 kb on + strand, within B158DRAFT_0070at 67.638 kb on + strand, within B158DRAFT_0070at 67.643 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.649 kb on - strand, within B158DRAFT_0070at 67.651 kb on - strand, within B158DRAFT_0070at 67.722 kb on + strandat 67.800 kb on + strandat 67.901 kb on - strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.985 kb on - strand, within B158DRAFT_0071at 68.047 kb on - strand, within B158DRAFT_0071at 68.052 kb on + strand, within B158DRAFT_0071at 68.317 kb on - strandat 68.324 kb on + strandat 68.324 kb on + strandat 68.348 kb on + strandat 68.387 kb on - strandat 68.483 kb on + strandat 68.491 kb on - strandat 68.595 kb on + strandat 68.595 kb on + strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.623 kb on + strandat 68.674 kb on + strand, within B158DRAFT_0072at 68.682 kb on - strand, within B158DRAFT_0072at 68.726 kb on - strand, within B158DRAFT_0072at 68.795 kb on + strand, within B158DRAFT_0072at 68.814 kb on + strand, within B158DRAFT_0072at 68.822 kb on - strand, within B158DRAFT_0072at 68.844 kb on - strand, within B158DRAFT_0072at 68.845 kb on - strand, within B158DRAFT_0072at 68.940 kb on - strand, within B158DRAFT_0072at 68.940 kb on - strand, within B158DRAFT_0072at 68.943 kb on + strand, within B158DRAFT_0072at 68.948 kb on + strand, within B158DRAFT_0072at 68.951 kb on - strand, within B158DRAFT_0072at 68.952 kb on - strand, within B158DRAFT_0072at 68.960 kb on + strand, within B158DRAFT_0072at 68.961 kb on - strand, within B158DRAFT_0072at 69.033 kb on + strand, within B158DRAFT_0072at 69.041 kb on - strand, within B158DRAFT_0072at 69.063 kb on + strand, within B158DRAFT_0072at 69.065 kb on - strand, within B158DRAFT_0072at 69.076 kb on - strand, within B158DRAFT_0072at 69.085 kb on + strand, within B158DRAFT_0072at 69.089 kb on - strand, within B158DRAFT_0072at 69.099 kb on - strand, within B158DRAFT_0072at 69.155 kb on + strand, within B158DRAFT_0072at 69.184 kb on + strand, within B158DRAFT_0072at 69.184 kb on + strand, within B158DRAFT_0072at 69.184 kb on + strand, within B158DRAFT_0072at 69.192 kb on - strand, within B158DRAFT_0072at 69.255 kb on + strand, within B158DRAFT_0072at 69.259 kb on - strand, within B158DRAFT_0072at 69.263 kb on - strand, within B158DRAFT_0072at 69.263 kb on - strand, within B158DRAFT_0072at 69.320 kb on + strandat 69.349 kb on - strandat 69.537 kb on + strand, within B158DRAFT_0073at 69.766 kb on - strand, within B158DRAFT_0073at 69.865 kb on + strand, within B158DRAFT_0073at 70.024 kb on - strandat 70.024 kb on - strandat 70.048 kb on - strandat 70.115 kb on + strandat 70.195 kb on + strandat 70.195 kb on + strandat 70.339 kb on - strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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67,582 - B158DRAFT_0070 0.67 -0.4
67,614 + B158DRAFT_0070 0.74 -0.7
67,638 + B158DRAFT_0070 0.80 -0.5
67,643 + B158DRAFT_0070 0.81 -0.6
67,648 + B158DRAFT_0070 0.82 -1.3
67,648 + B158DRAFT_0070 0.82 +0.7
67,648 + B158DRAFT_0070 0.82 +0.3
67,649 - B158DRAFT_0070 0.82 -0.4
67,651 - B158DRAFT_0070 0.83 -1.0
67,722 + -0.8
67,800 + +0.1
67,901 - B158DRAFT_0071 0.17 +0.0
67,939 + B158DRAFT_0071 0.24 -2.4
67,939 + B158DRAFT_0071 0.24 -0.2
67,939 + B158DRAFT_0071 0.24 -0.7
67,947 - B158DRAFT_0071 0.25 -0.2
67,947 - B158DRAFT_0071 0.25 -0.0
67,947 - B158DRAFT_0071 0.25 +0.1
67,947 - B158DRAFT_0071 0.25 +0.6
67,985 - B158DRAFT_0071 0.32 -0.7
68,047 - B158DRAFT_0071 0.43 +0.1
68,052 + B158DRAFT_0071 0.44 -1.5
68,317 - +0.0
68,324 + -0.1
68,324 + +0.2
68,348 + -0.2
68,387 - +0.8
68,483 + +0.6
68,491 - +0.1
68,595 + +0.0
68,595 + +0.1
68,603 - -0.7
68,603 - +0.1
68,603 - -0.3
68,603 - -0.1
68,603 - -0.1
68,623 + -0.9
68,674 + B158DRAFT_0072 0.14 +1.5
68,682 - B158DRAFT_0072 0.15 +0.1
68,726 - B158DRAFT_0072 0.21 +0.3
68,795 + B158DRAFT_0072 0.29 +0.4
68,814 + B158DRAFT_0072 0.32 -0.3
68,822 - B158DRAFT_0072 0.33 +0.3
68,844 - B158DRAFT_0072 0.36 +0.2
68,845 - B158DRAFT_0072 0.36 +0.0
68,940 - B158DRAFT_0072 0.48 +0.3
68,940 - B158DRAFT_0072 0.48 -0.1
68,943 + B158DRAFT_0072 0.48 +0.5
68,948 + B158DRAFT_0072 0.49 -0.4
68,951 - B158DRAFT_0072 0.49 -1.1
68,952 - B158DRAFT_0072 0.49 -0.4
68,960 + B158DRAFT_0072 0.50 +0.4
68,961 - B158DRAFT_0072 0.50 +0.6
69,033 + B158DRAFT_0072 0.59 -0.2
69,041 - B158DRAFT_0072 0.60 -0.0
69,063 + B158DRAFT_0072 0.63 +0.0
69,065 - B158DRAFT_0072 0.63 +0.2
69,076 - B158DRAFT_0072 0.65 -0.9
69,085 + B158DRAFT_0072 0.66 +0.2
69,089 - B158DRAFT_0072 0.66 +0.0
69,099 - B158DRAFT_0072 0.67 -0.3
69,155 + B158DRAFT_0072 0.74 -0.5
69,184 + B158DRAFT_0072 0.78 +1.7
69,184 + B158DRAFT_0072 0.78 -0.2
69,184 + B158DRAFT_0072 0.78 -0.1
69,192 - B158DRAFT_0072 0.79 +0.2
69,255 + B158DRAFT_0072 0.87 -0.2
69,259 - B158DRAFT_0072 0.87 +0.1
69,263 - B158DRAFT_0072 0.88 +0.8
69,263 - B158DRAFT_0072 0.88 +0.3
69,320 + +1.2
69,349 - -0.1
69,537 + B158DRAFT_0073 0.22 -1.2
69,766 - B158DRAFT_0073 0.56 -0.2
69,865 + B158DRAFT_0073 0.71 -0.7
70,024 - -0.6
70,024 - -0.9
70,048 - -0.1
70,115 + -1.0
70,195 + -0.4
70,195 + -2.3
70,339 - B158DRAFT_0074 0.31 -0.3
70,356 + B158DRAFT_0074 0.35 +0.2
70,356 + B158DRAFT_0074 0.35 +0.1
70,356 + B158DRAFT_0074 0.35 -0.3
70,356 + B158DRAFT_0074 0.35 -0.4
70,356 + B158DRAFT_0074 0.35 -0.7
70,356 + B158DRAFT_0074 0.35 -0.6

Or see this region's nucleotide sequence