Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2257

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2255 and B158DRAFT_2256 are separated by 134 nucleotidesB158DRAFT_2256 and B158DRAFT_2257 are separated by 61 nucleotidesB158DRAFT_2257 and B158DRAFT_2258 are separated by 15 nucleotides B158DRAFT_2255: B158DRAFT_2255 - Molecular chaperone (small heat shock protein), at 418,061 to 418,483 _2255 B158DRAFT_2256: B158DRAFT_2256 - Universal stress protein UspA and related nucleotide-binding proteins, at 418,618 to 419,073 _2256 B158DRAFT_2257: B158DRAFT_2257 - Predicted exporters of the RND superfamily, at 419,135 to 421,627 _2257 B158DRAFT_2258: B158DRAFT_2258 - Putative Mg2+ and Co2+ transporter CorB, at 421,643 to 422,923 _2258 Position (kb) 419 420 421 422Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 418.159 kb on - strand, within B158DRAFT_2255at 418.164 kb on - strand, within B158DRAFT_2255at 418.169 kb on - strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.324 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.371 kb on + strand, within B158DRAFT_2255at 418.372 kb on - strand, within B158DRAFT_2255at 418.388 kb on + strand, within B158DRAFT_2255at 418.396 kb on + strand, within B158DRAFT_2255at 418.409 kb on + strand, within B158DRAFT_2255at 418.461 kb on + strandat 418.469 kb on - strandat 418.510 kb on - strandat 418.569 kb on + strandat 418.577 kb on - strandat 418.616 kb on - strandat 418.616 kb on - strandat 418.666 kb on + strand, within B158DRAFT_2256at 418.674 kb on - strand, within B158DRAFT_2256at 418.887 kb on + strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.925 kb on + strand, within B158DRAFT_2256at 418.933 kb on - strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256at 418.987 kb on - strand, within B158DRAFT_2256at 419.033 kb on + strandat 419.068 kb on + strandat 419.158 kb on + strandat 419.188 kb on + strandat 419.196 kb on - strandat 419.196 kb on - strandat 419.196 kb on - strandat 419.293 kb on - strandat 419.297 kb on + strandat 419.297 kb on + strandat 419.305 kb on - strandat 419.312 kb on + strandat 419.312 kb on + strandat 419.312 kb on - strandat 419.320 kb on - strandat 419.569 kb on - strand, within B158DRAFT_2257at 419.659 kb on + strand, within B158DRAFT_2257at 419.667 kb on - strand, within B158DRAFT_2257at 419.737 kb on + strand, within B158DRAFT_2257at 419.943 kb on + strand, within B158DRAFT_2257at 420.125 kb on + strand, within B158DRAFT_2257at 420.133 kb on - strand, within B158DRAFT_2257at 420.193 kb on + strand, within B158DRAFT_2257at 420.540 kb on + strand, within B158DRAFT_2257at 420.553 kb on + strand, within B158DRAFT_2257at 420.584 kb on - strand, within B158DRAFT_2257at 420.896 kb on - strand, within B158DRAFT_2257at 420.896 kb on - strand, within B158DRAFT_2257at 420.969 kb on + strand, within B158DRAFT_2257at 421.107 kb on + strand, within B158DRAFT_2257at 421.135 kb on - strand, within B158DRAFT_2257at 421.222 kb on + strand, within B158DRAFT_2257at 421.329 kb on - strand, within B158DRAFT_2257at 421.387 kb on - strandat 421.745 kb on + strandat 421.753 kb on - strandat 421.753 kb on - strandat 421.791 kb on - strand, within B158DRAFT_2258at 421.813 kb on + strand, within B158DRAFT_2258at 421.890 kb on + strand, within B158DRAFT_2258at 422.068 kb on - strand, within B158DRAFT_2258at 422.068 kb on - strand, within B158DRAFT_2258at 422.081 kb on - strand, within B158DRAFT_2258at 422.103 kb on - strand, within B158DRAFT_2258at 422.103 kb on - strand, within B158DRAFT_2258at 422.121 kb on + strand, within B158DRAFT_2258at 422.296 kb on + strand, within B158DRAFT_2258at 422.316 kb on - strand, within B158DRAFT_2258at 422.395 kb on - strand, within B158DRAFT_2258at 422.415 kb on - strand, within B158DRAFT_2258

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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418,159 - B158DRAFT_2255 0.23 -1.1
418,164 - B158DRAFT_2255 0.24 -0.2
418,169 - B158DRAFT_2255 0.26 -0.1
418,180 + B158DRAFT_2255 0.28 -0.7
418,180 + B158DRAFT_2255 0.28 -0.1
418,180 + B158DRAFT_2255 0.28 +0.7
418,180 + B158DRAFT_2255 0.28 +0.0
418,180 + B158DRAFT_2255 0.28 +0.2
418,180 + B158DRAFT_2255 0.28 +0.6
418,180 + B158DRAFT_2255 0.28 +0.1
418,180 + B158DRAFT_2255 0.28 +0.1
418,180 + B158DRAFT_2255 0.28 -0.4
418,180 + B158DRAFT_2255 0.28 -0.7
418,180 + B158DRAFT_2255 0.28 +0.2
418,180 + B158DRAFT_2255 0.28 -0.0
418,180 + B158DRAFT_2255 0.28 -0.9
418,180 + B158DRAFT_2255 0.28 +0.1
418,188 - B158DRAFT_2255 0.30 -0.4
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 -0.1
418,188 - B158DRAFT_2255 0.30 +0.4
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 +2.2
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 +0.5
418,188 - B158DRAFT_2255 0.30 +0.1
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 +0.2
418,188 - B158DRAFT_2255 0.30 -0.1
418,188 - B158DRAFT_2255 0.30 -0.9
418,188 - B158DRAFT_2255 0.30 -0.0
418,188 - B158DRAFT_2255 0.30 -0.1
418,188 - B158DRAFT_2255 0.30 +0.1
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 +0.4
418,188 - B158DRAFT_2255 0.30 -0.5
418,324 + B158DRAFT_2255 0.62 +0.0
418,364 + B158DRAFT_2255 0.72 -0.6
418,364 + B158DRAFT_2255 0.72 -0.4
418,371 + B158DRAFT_2255 0.73 -0.8
418,372 - B158DRAFT_2255 0.74 +0.1
418,388 + B158DRAFT_2255 0.77 -0.3
418,396 + B158DRAFT_2255 0.79 -0.8
418,409 + B158DRAFT_2255 0.82 +0.3
418,461 + -0.5
418,469 - -0.1
418,510 - -0.7
418,569 + +0.0
418,577 - -0.6
418,616 - -1.2
418,616 - +0.1
418,666 + B158DRAFT_2256 0.11 -0.7
418,674 - B158DRAFT_2256 0.12 -0.1
418,887 + B158DRAFT_2256 0.59 +0.0
418,895 - B158DRAFT_2256 0.61 -0.7
418,895 - B158DRAFT_2256 0.61 -0.7
418,925 + B158DRAFT_2256 0.67 +0.1
418,933 - B158DRAFT_2256 0.69 +0.1
418,964 + B158DRAFT_2256 0.76 -0.6
418,964 + B158DRAFT_2256 0.76 -0.2
418,987 - B158DRAFT_2256 0.81 -0.0
419,033 + -1.1
419,068 + -0.3
419,158 + -1.6
419,188 + -2.0
419,196 - -4.2
419,196 - -3.0
419,196 - -1.7
419,293 - -3.4
419,297 + -1.9
419,297 + -0.3
419,305 - -2.2
419,312 + -2.4
419,312 + -1.9
419,312 - -2.3
419,320 - -2.0
419,569 - B158DRAFT_2257 0.17 -1.4
419,659 + B158DRAFT_2257 0.21 -0.7
419,667 - B158DRAFT_2257 0.21 -2.4
419,737 + B158DRAFT_2257 0.24 -0.8
419,943 + B158DRAFT_2257 0.32 -2.2
420,125 + B158DRAFT_2257 0.40 -2.2
420,133 - B158DRAFT_2257 0.40 -1.2
420,193 + B158DRAFT_2257 0.42 -1.4
420,540 + B158DRAFT_2257 0.56 -0.8
420,553 + B158DRAFT_2257 0.57 -3.2
420,584 - B158DRAFT_2257 0.58 -3.1
420,896 - B158DRAFT_2257 0.71 -1.2
420,896 - B158DRAFT_2257 0.71 -2.3
420,969 + B158DRAFT_2257 0.74 -1.8
421,107 + B158DRAFT_2257 0.79 -1.7
421,135 - B158DRAFT_2257 0.80 -2.2
421,222 + B158DRAFT_2257 0.84 -1.2
421,329 - B158DRAFT_2257 0.88 -2.3
421,387 - -1.7
421,745 + -1.2
421,753 - -0.4
421,753 - -1.2
421,791 - B158DRAFT_2258 0.12 -1.5
421,813 + B158DRAFT_2258 0.13 -4.3
421,890 + B158DRAFT_2258 0.19 -2.1
422,068 - B158DRAFT_2258 0.33 -1.6
422,068 - B158DRAFT_2258 0.33 +1.9
422,081 - B158DRAFT_2258 0.34 -0.9
422,103 - B158DRAFT_2258 0.36 -1.1
422,103 - B158DRAFT_2258 0.36 -0.3
422,121 + B158DRAFT_2258 0.37 -1.2
422,296 + B158DRAFT_2258 0.51 -3.9
422,316 - B158DRAFT_2258 0.53 -0.7
422,395 - B158DRAFT_2258 0.59 -0.3
422,415 - B158DRAFT_2258 0.60 -0.4

Or see this region's nucleotide sequence