Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1274

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1273 and B158DRAFT_1274 are separated by 71 nucleotidesB158DRAFT_1274 and B158DRAFT_1275 are separated by 150 nucleotidesB158DRAFT_1275 and B158DRAFT_1276 are separated by 64 nucleotidesB158DRAFT_1276 and B158DRAFT_1277 are separated by 44 nucleotidesB158DRAFT_1277 and B158DRAFT_1278 are separated by 100 nucleotides B158DRAFT_1273: B158DRAFT_1273 - Excinuclease ABC subunit C, at 1,315,462 to 1,317,300 _1273 B158DRAFT_1274: B158DRAFT_1274 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,317,372 to 1,317,938 _1274 B158DRAFT_1275: B158DRAFT_1275 - tRNA_Gly_GCC, at 1,318,089 to 1,318,164 _1275 B158DRAFT_1276: B158DRAFT_1276 - tRNA_Cys_GCA, at 1,318,229 to 1,318,302 _1276 B158DRAFT_1277: B158DRAFT_1277 - tRNA_Leu_TAA, at 1,318,347 to 1,318,433 _1277 B158DRAFT_1278: B158DRAFT_1278 - Signal transduction histidine kinase, at 1,318,534 to 1,319,769 _1278 Position (kb) 1317 1318Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1316.447 kb on + strand, within B158DRAFT_1273at 1316.502 kb on + strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.510 kb on - strand, within B158DRAFT_1273at 1316.513 kb on + strand, within B158DRAFT_1273at 1316.516 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.521 kb on - strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.523 kb on + strand, within B158DRAFT_1273at 1316.531 kb on - strand, within B158DRAFT_1273at 1316.558 kb on - strand, within B158DRAFT_1273at 1316.580 kb on + strand, within B158DRAFT_1273at 1316.588 kb on - strand, within B158DRAFT_1273at 1316.588 kb on - strand, within B158DRAFT_1273at 1316.591 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.678 kb on + strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.686 kb on - strand, within B158DRAFT_1273at 1316.688 kb on + strand, within B158DRAFT_1273at 1316.688 kb on + strand, within B158DRAFT_1273at 1316.695 kb on - strand, within B158DRAFT_1273at 1316.695 kb on - strand, within B158DRAFT_1273at 1316.811 kb on - strand, within B158DRAFT_1273at 1316.862 kb on - strand, within B158DRAFT_1273at 1316.901 kb on + strand, within B158DRAFT_1273at 1316.903 kb on - strand, within B158DRAFT_1273at 1316.928 kb on + strand, within B158DRAFT_1273at 1316.936 kb on - strand, within B158DRAFT_1273at 1316.961 kb on + strand, within B158DRAFT_1273at 1316.970 kb on + strand, within B158DRAFT_1273at 1316.986 kb on + strand, within B158DRAFT_1273at 1317.044 kb on - strand, within B158DRAFT_1273at 1317.058 kb on - strand, within B158DRAFT_1273at 1317.099 kb on + strand, within B158DRAFT_1273at 1317.224 kb on + strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.232 kb on - strandat 1317.991 kb on + strandat 1317.999 kb on - strandat 1317.999 kb on - strandat 1318.005 kb on - strandat 1318.007 kb on + strandat 1318.474 kb on - strandat 1318.476 kb on + strandat 1318.476 kb on + strandat 1318.484 kb on + strandat 1318.484 kb on + strandat 1318.523 kb on + strandat 1318.523 kb on + strandat 1318.523 kb on + strandat 1318.523 kb on + strandat 1318.523 kb on + strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.531 kb on - strandat 1318.648 kb on + strandat 1318.656 kb on - strandat 1318.660 kb on + strand, within B158DRAFT_1278at 1318.660 kb on + strand, within B158DRAFT_1278at 1318.660 kb on + strand, within B158DRAFT_1278at 1318.660 kb on + strand, within B158DRAFT_1278at 1318.660 kb on + strand, within B158DRAFT_1278at 1318.660 kb on + strand, within B158DRAFT_1278at 1318.668 kb on - strand, within B158DRAFT_1278at 1318.668 kb on - strand, within B158DRAFT_1278at 1318.668 kb on - strand, within B158DRAFT_1278at 1318.719 kb on + strand, within B158DRAFT_1278at 1318.737 kb on + strand, within B158DRAFT_1278at 1318.847 kb on - strand, within B158DRAFT_1278at 1318.874 kb on + strand, within B158DRAFT_1278at 1318.920 kb on + strand, within B158DRAFT_1278

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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1,316,447 + B158DRAFT_1273 0.54 -4.6
1,316,502 + B158DRAFT_1273 0.57 -5.4
1,316,510 - B158DRAFT_1273 0.57 -5.1
1,316,510 - B158DRAFT_1273 0.57 -4.6
1,316,510 - B158DRAFT_1273 0.57 -5.3
1,316,513 + B158DRAFT_1273 0.57 -4.5
1,316,516 - B158DRAFT_1273 0.57 -3.8
1,316,521 - B158DRAFT_1273 0.58 -5.1
1,316,521 - B158DRAFT_1273 0.58 -3.5
1,316,521 - B158DRAFT_1273 0.58 -4.8
1,316,521 - B158DRAFT_1273 0.58 -3.9
1,316,521 - B158DRAFT_1273 0.58 -3.0
1,316,523 + B158DRAFT_1273 0.58 -3.5
1,316,523 + B158DRAFT_1273 0.58 -2.9
1,316,523 + B158DRAFT_1273 0.58 -3.3
1,316,523 + B158DRAFT_1273 0.58 -3.9
1,316,523 + B158DRAFT_1273 0.58 -4.3
1,316,523 + B158DRAFT_1273 0.58 -3.9
1,316,523 + B158DRAFT_1273 0.58 -4.9
1,316,523 + B158DRAFT_1273 0.58 -1.3
1,316,531 - B158DRAFT_1273 0.58 -4.0
1,316,558 - B158DRAFT_1273 0.60 -4.1
1,316,580 + B158DRAFT_1273 0.61 -4.1
1,316,588 - B158DRAFT_1273 0.61 -3.9
1,316,588 - B158DRAFT_1273 0.61 -3.6
1,316,591 + B158DRAFT_1273 0.61 -5.0
1,316,678 + B158DRAFT_1273 0.66 -3.1
1,316,678 + B158DRAFT_1273 0.66 -3.4
1,316,678 + B158DRAFT_1273 0.66 -3.7
1,316,678 + B158DRAFT_1273 0.66 -4.1
1,316,678 + B158DRAFT_1273 0.66 -4.3
1,316,678 + B158DRAFT_1273 0.66 -3.5
1,316,678 + B158DRAFT_1273 0.66 -2.7
1,316,678 + B158DRAFT_1273 0.66 -3.3
1,316,678 + B158DRAFT_1273 0.66 -3.8
1,316,678 + B158DRAFT_1273 0.66 -3.7
1,316,678 + B158DRAFT_1273 0.66 -3.9
1,316,678 + B158DRAFT_1273 0.66 -3.1
1,316,678 + B158DRAFT_1273 0.66 -4.1
1,316,678 + B158DRAFT_1273 0.66 -4.9
1,316,678 + B158DRAFT_1273 0.66 -3.7
1,316,686 - B158DRAFT_1273 0.67 -1.0
1,316,686 - B158DRAFT_1273 0.67 -3.5
1,316,686 - B158DRAFT_1273 0.67 -4.8
1,316,686 - B158DRAFT_1273 0.67 -4.9
1,316,686 - B158DRAFT_1273 0.67 -4.3
1,316,686 - B158DRAFT_1273 0.67 -4.8
1,316,686 - B158DRAFT_1273 0.67 -3.1
1,316,686 - B158DRAFT_1273 0.67 -4.9
1,316,686 - B158DRAFT_1273 0.67 -4.4
1,316,686 - B158DRAFT_1273 0.67 -4.4
1,316,686 - B158DRAFT_1273 0.67 -3.4
1,316,686 - B158DRAFT_1273 0.67 -4.4
1,316,686 - B158DRAFT_1273 0.67 -4.6
1,316,686 - B158DRAFT_1273 0.67 -2.4
1,316,688 + B158DRAFT_1273 0.67 -3.3
1,316,688 + B158DRAFT_1273 0.67 -3.7
1,316,695 - B158DRAFT_1273 0.67 -4.4
1,316,695 - B158DRAFT_1273 0.67 -3.8
1,316,811 - B158DRAFT_1273 0.73 -3.7
1,316,862 - B158DRAFT_1273 0.76 -4.4
1,316,901 + B158DRAFT_1273 0.78 -1.4
1,316,903 - B158DRAFT_1273 0.78 -1.6
1,316,928 + B158DRAFT_1273 0.80 -3.4
1,316,936 - B158DRAFT_1273 0.80 -5.7
1,316,961 + B158DRAFT_1273 0.82 -1.6
1,316,970 + B158DRAFT_1273 0.82 -1.3
1,316,986 + B158DRAFT_1273 0.83 -2.6
1,317,044 - B158DRAFT_1273 0.86 -2.7
1,317,058 - B158DRAFT_1273 0.87 -4.0
1,317,099 + B158DRAFT_1273 0.89 -2.6
1,317,224 + -2.8
1,317,232 - -2.9
1,317,232 - -3.4
1,317,232 - -3.7
1,317,232 - -3.4
1,317,232 - -3.8
1,317,232 - -3.5
1,317,991 + +0.1
1,317,999 - -0.4
1,317,999 - -0.0
1,318,005 - +0.1
1,318,007 + -0.5
1,318,474 - -0.3
1,318,476 + +0.1
1,318,476 + -0.4
1,318,484 + -0.2
1,318,484 + -0.1
1,318,523 + -0.7
1,318,523 + -0.0
1,318,523 + -0.0
1,318,523 + +0.3
1,318,523 + -0.2
1,318,531 - -2.1
1,318,531 - -0.2
1,318,531 - -0.3
1,318,531 - -0.0
1,318,531 - -0.3
1,318,531 - +0.3
1,318,531 - +0.0
1,318,531 - -0.4
1,318,648 + -0.2
1,318,656 - -0.0
1,318,660 + B158DRAFT_1278 0.10 +0.2
1,318,660 + B158DRAFT_1278 0.10 -0.1
1,318,660 + B158DRAFT_1278 0.10 -0.8
1,318,660 + B158DRAFT_1278 0.10 -0.2
1,318,660 + B158DRAFT_1278 0.10 -0.7
1,318,660 + B158DRAFT_1278 0.10 -0.8
1,318,668 - B158DRAFT_1278 0.11 -0.5
1,318,668 - B158DRAFT_1278 0.11 -0.7
1,318,668 - B158DRAFT_1278 0.11 -0.9
1,318,719 + B158DRAFT_1278 0.15 +0.2
1,318,737 + B158DRAFT_1278 0.16 +0.8
1,318,847 - B158DRAFT_1278 0.25 -0.2
1,318,874 + B158DRAFT_1278 0.28 -0.4
1,318,920 + B158DRAFT_1278 0.31 +0.1

Or see this region's nucleotide sequence