Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0984

Experiment: m.b. Cisplatin 0.0125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0983 and B158DRAFT_0984 are separated by 127 nucleotidesB158DRAFT_0984 and B158DRAFT_0985 are separated by 27 nucleotides B158DRAFT_0983: B158DRAFT_0983 - hypothetical protein, at 1,016,705 to 1,018,477 _0983 B158DRAFT_0984: B158DRAFT_0984 - lysine-2,3-aminomutase-related protein, at 1,018,605 to 1,019,636 _0984 B158DRAFT_0985: B158DRAFT_0985 - translation elongation factor P, at 1,019,664 to 1,020,227 _0985 Position (kb) 1018 1019 1020Strain fitness (log2 ratio) -3 -2 -1 0 1at 1017.636 kb on + strand, within B158DRAFT_0983at 1017.641 kb on + strand, within B158DRAFT_0983at 1017.642 kb on - strand, within B158DRAFT_0983at 1017.646 kb on + strand, within B158DRAFT_0983at 1017.649 kb on - strand, within B158DRAFT_0983at 1017.747 kb on - strand, within B158DRAFT_0983at 1017.747 kb on - strand, within B158DRAFT_0983at 1017.749 kb on - strand, within B158DRAFT_0983at 1017.749 kb on - strand, within B158DRAFT_0983at 1017.766 kb on + strand, within B158DRAFT_0983at 1017.774 kb on - strand, within B158DRAFT_0983at 1017.795 kb on - strand, within B158DRAFT_0983at 1017.936 kb on + strand, within B158DRAFT_0983at 1018.034 kb on + strand, within B158DRAFT_0983at 1018.042 kb on - strand, within B158DRAFT_0983at 1018.071 kb on - strand, within B158DRAFT_0983at 1018.098 kb on - strand, within B158DRAFT_0983at 1018.109 kb on - strand, within B158DRAFT_0983at 1018.148 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.163 kb on - strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.255 kb on + strand, within B158DRAFT_0983at 1018.292 kb on + strand, within B158DRAFT_0983at 1018.306 kb on + strandat 1018.352 kb on - strandat 1018.352 kb on - strandat 1018.379 kb on + strandat 1018.411 kb on - strandat 1018.466 kb on + strandat 1018.467 kb on + strandat 1018.475 kb on - strandat 1018.485 kb on + strandat 1018.486 kb on + strandat 1018.491 kb on + strandat 1018.494 kb on - strandat 1018.521 kb on + strandat 1018.788 kb on + strand, within B158DRAFT_0984at 1018.881 kb on + strand, within B158DRAFT_0984at 1018.897 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.964 kb on - strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.982 kb on + strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.990 kb on - strand, within B158DRAFT_0984at 1019.001 kb on + strand, within B158DRAFT_0984at 1019.004 kb on - strand, within B158DRAFT_0984at 1019.006 kb on + strand, within B158DRAFT_0984at 1019.009 kb on - strand, within B158DRAFT_0984at 1019.020 kb on + strand, within B158DRAFT_0984at 1019.069 kb on + strand, within B158DRAFT_0984at 1019.071 kb on + strand, within B158DRAFT_0984at 1019.127 kb on - strand, within B158DRAFT_0984at 1019.217 kb on - strand, within B158DRAFT_0984at 1019.393 kb on - strand, within B158DRAFT_0984at 1019.512 kb on + strand, within B158DRAFT_0984at 1019.512 kb on + strand, within B158DRAFT_0984at 1019.520 kb on - strand, within B158DRAFT_0984at 1019.520 kb on - strand, within B158DRAFT_0984at 1019.734 kb on - strand, within B158DRAFT_0985at 1019.774 kb on - strand, within B158DRAFT_0985at 1019.790 kb on + strand, within B158DRAFT_0985at 1019.790 kb on + strand, within B158DRAFT_0985at 1019.838 kb on + strand, within B158DRAFT_0985at 1019.927 kb on - strand, within B158DRAFT_0985at 1019.937 kb on - strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.042 kb on + strand, within B158DRAFT_0985at 1020.050 kb on - strand, within B158DRAFT_0985at 1020.050 kb on - strand, within B158DRAFT_0985at 1020.087 kb on - strand, within B158DRAFT_0985at 1020.111 kb on + strand, within B158DRAFT_0985at 1020.112 kb on + strand, within B158DRAFT_0985at 1020.127 kb on - strand, within B158DRAFT_0985at 1020.221 kb on + strandat 1020.245 kb on + strandat 1020.248 kb on - strandat 1020.285 kb on + strandat 1020.285 kb on + strandat 1020.285 kb on + strandat 1020.339 kb on - strandat 1020.346 kb on + strandat 1020.354 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
remove
1,017,636 + B158DRAFT_0983 0.53 +0.3
1,017,641 + B158DRAFT_0983 0.53 -0.1
1,017,642 - B158DRAFT_0983 0.53 -0.5
1,017,646 + B158DRAFT_0983 0.53 -0.1
1,017,649 - B158DRAFT_0983 0.53 -0.0
1,017,747 - B158DRAFT_0983 0.59 +0.3
1,017,747 - B158DRAFT_0983 0.59 -0.2
1,017,749 - B158DRAFT_0983 0.59 +0.1
1,017,749 - B158DRAFT_0983 0.59 -0.2
1,017,766 + B158DRAFT_0983 0.60 +0.1
1,017,774 - B158DRAFT_0983 0.60 +0.3
1,017,795 - B158DRAFT_0983 0.61 +0.4
1,017,936 + B158DRAFT_0983 0.69 +0.2
1,018,034 + B158DRAFT_0983 0.75 +1.1
1,018,042 - B158DRAFT_0983 0.75 +0.6
1,018,071 - B158DRAFT_0983 0.77 +0.2
1,018,098 - B158DRAFT_0983 0.79 -0.7
1,018,109 - B158DRAFT_0983 0.79 -0.8
1,018,148 + B158DRAFT_0983 0.81 -0.4
1,018,155 + B158DRAFT_0983 0.82 +0.0
1,018,155 + B158DRAFT_0983 0.82 -0.2
1,018,155 + B158DRAFT_0983 0.82 -0.9
1,018,163 - B158DRAFT_0983 0.82 +0.1
1,018,250 + B158DRAFT_0983 0.87 +0.1
1,018,250 + B158DRAFT_0983 0.87 +0.4
1,018,250 + B158DRAFT_0983 0.87 -0.8
1,018,250 + B158DRAFT_0983 0.87 -0.1
1,018,255 + B158DRAFT_0983 0.87 +0.1
1,018,292 + B158DRAFT_0983 0.90 +0.5
1,018,306 + +0.0
1,018,352 - -0.8
1,018,352 - -0.1
1,018,379 + +0.2
1,018,411 - +0.0
1,018,466 + +0.2
1,018,467 + -0.4
1,018,475 - -0.4
1,018,485 + -0.5
1,018,486 + +0.2
1,018,491 + -0.7
1,018,494 - +0.1
1,018,521 + +0.1
1,018,788 + B158DRAFT_0984 0.18 -1.6
1,018,881 + B158DRAFT_0984 0.27 -1.0
1,018,897 + B158DRAFT_0984 0.28 -0.5
1,018,956 + B158DRAFT_0984 0.34 -0.5
1,018,956 + B158DRAFT_0984 0.34 -0.4
1,018,956 + B158DRAFT_0984 0.34 -1.2
1,018,964 - B158DRAFT_0984 0.35 -1.2
1,018,977 + B158DRAFT_0984 0.36 -0.5
1,018,977 + B158DRAFT_0984 0.36 +0.2
1,018,977 + B158DRAFT_0984 0.36 -0.7
1,018,977 + B158DRAFT_0984 0.36 -0.9
1,018,982 + B158DRAFT_0984 0.37 -0.6
1,018,985 - B158DRAFT_0984 0.37 -0.4
1,018,985 - B158DRAFT_0984 0.37 -1.0
1,018,990 - B158DRAFT_0984 0.37 -0.1
1,019,001 + B158DRAFT_0984 0.38 -0.3
1,019,004 - B158DRAFT_0984 0.39 -0.4
1,019,006 + B158DRAFT_0984 0.39 -0.6
1,019,009 - B158DRAFT_0984 0.39 -1.5
1,019,020 + B158DRAFT_0984 0.40 -0.5
1,019,069 + B158DRAFT_0984 0.45 -1.5
1,019,071 + B158DRAFT_0984 0.45 -1.0
1,019,127 - B158DRAFT_0984 0.51 -1.5
1,019,217 - B158DRAFT_0984 0.59 -0.7
1,019,393 - B158DRAFT_0984 0.76 -0.2
1,019,512 + B158DRAFT_0984 0.88 -0.5
1,019,512 + B158DRAFT_0984 0.88 -1.0
1,019,520 - B158DRAFT_0984 0.89 -0.2
1,019,520 - B158DRAFT_0984 0.89 -2.2
1,019,734 - B158DRAFT_0985 0.12 -2.9
1,019,774 - B158DRAFT_0985 0.20 -2.6
1,019,790 + B158DRAFT_0985 0.22 +0.5
1,019,790 + B158DRAFT_0985 0.22 -2.6
1,019,838 + B158DRAFT_0985 0.31 -1.9
1,019,927 - B158DRAFT_0985 0.47 -0.5
1,019,937 - B158DRAFT_0985 0.48 -2.8
1,020,042 + B158DRAFT_0985 0.67 -1.3
1,020,042 + B158DRAFT_0985 0.67 -0.9
1,020,042 + B158DRAFT_0985 0.67 -0.5
1,020,042 + B158DRAFT_0985 0.67 -1.7
1,020,050 - B158DRAFT_0985 0.68 -2.7
1,020,050 - B158DRAFT_0985 0.68 -0.8
1,020,087 - B158DRAFT_0985 0.75 -2.3
1,020,111 + B158DRAFT_0985 0.79 -1.3
1,020,112 + B158DRAFT_0985 0.79 -1.3
1,020,127 - B158DRAFT_0985 0.82 -1.5
1,020,221 + -0.1
1,020,245 + +0.1
1,020,248 - +0.4
1,020,285 + +0.1
1,020,285 + -0.6
1,020,285 + -0.6
1,020,339 - -0.2
1,020,346 + +0.2
1,020,354 - -0.2

Or see this region's nucleotide sequence