Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0470

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0469 and B158DRAFT_0470 are separated by 31 nucleotidesB158DRAFT_0470 and B158DRAFT_0471 are separated by 221 nucleotidesB158DRAFT_0471 and B158DRAFT_0472 are separated by 197 nucleotides B158DRAFT_0469: B158DRAFT_0469 - glycyl-tRNA synthetase alpha chain (EC 6.1.1.14), at 472,398 to 473,462 _0469 B158DRAFT_0470: B158DRAFT_0470 - DNA-3-methyladenine glycosylase I (EC 3.2.2.20), at 473,494 to 474,042 _0470 B158DRAFT_0471: B158DRAFT_0471 - hypothetical protein, at 474,264 to 474,497 _0471 B158DRAFT_0472: B158DRAFT_0472 - hypothetical protein, at 474,695 to 475,072 _0472 Position (kb) 473 474 475Strain fitness (log2 ratio) -2 -1 0 1at 473.542 kb on - strandat 473.563 kb on + strand, within B158DRAFT_0470at 473.563 kb on + strand, within B158DRAFT_0470at 473.571 kb on - strand, within B158DRAFT_0470at 473.611 kb on - strand, within B158DRAFT_0470at 473.612 kb on - strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.631 kb on - strand, within B158DRAFT_0470at 473.631 kb on - strand, within B158DRAFT_0470at 473.661 kb on + strand, within B158DRAFT_0470at 473.713 kb on + strand, within B158DRAFT_0470at 473.808 kb on + strand, within B158DRAFT_0470at 473.847 kb on - strand, within B158DRAFT_0470at 474.065 kb on - strandat 474.126 kb on + strandat 474.126 kb on + strandat 474.134 kb on - strandat 474.249 kb on + strandat 474.250 kb on + strandat 474.250 kb on + strandat 474.258 kb on - strandat 474.382 kb on + strand, within B158DRAFT_0471at 474.387 kb on + strand, within B158DRAFT_0471at 474.387 kb on + strand, within B158DRAFT_0471at 474.390 kb on - strand, within B158DRAFT_0471at 474.395 kb on - strand, within B158DRAFT_0471at 474.395 kb on - strand, within B158DRAFT_0471at 474.415 kb on + strand, within B158DRAFT_0471at 474.423 kb on - strand, within B158DRAFT_0471at 474.423 kb on - strand, within B158DRAFT_0471at 474.523 kb on + strandat 474.533 kb on - strandat 474.590 kb on + strandat 474.590 kb on + strandat 474.607 kb on + strandat 474.607 kb on + strandat 474.607 kb on + strandat 474.615 kb on - strandat 474.724 kb on + strandat 474.724 kb on + strandat 474.732 kb on - strandat 474.732 kb on - strandat 474.734 kb on + strand, within B158DRAFT_0472at 474.742 kb on - strand, within B158DRAFT_0472at 474.790 kb on - strand, within B158DRAFT_0472at 474.862 kb on + strand, within B158DRAFT_0472at 474.884 kb on - strand, within B158DRAFT_0472at 474.898 kb on + strand, within B158DRAFT_0472at 474.906 kb on - strand, within B158DRAFT_0472at 474.928 kb on - strand, within B158DRAFT_0472at 474.943 kb on + strand, within B158DRAFT_0472at 474.943 kb on + strand, within B158DRAFT_0472at 474.996 kb on - strand, within B158DRAFT_0472at 474.996 kb on - strand, within B158DRAFT_0472at 475.002 kb on + strand, within B158DRAFT_0472at 475.010 kb on - strand, within B158DRAFT_0472at 475.010 kb on - strand, within B158DRAFT_0472at 475.039 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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473,542 - +0.3
473,563 + B158DRAFT_0470 0.13 +0.1
473,563 + B158DRAFT_0470 0.13 -0.5
473,571 - B158DRAFT_0470 0.14 -0.3
473,611 - B158DRAFT_0470 0.21 -0.1
473,612 - B158DRAFT_0470 0.21 -0.1
473,623 + B158DRAFT_0470 0.23 -0.1
473,623 + B158DRAFT_0470 0.23 -0.1
473,623 + B158DRAFT_0470 0.23 -0.5
473,623 + B158DRAFT_0470 0.23 -0.2
473,631 - B158DRAFT_0470 0.25 -0.1
473,631 - B158DRAFT_0470 0.25 +0.3
473,661 + B158DRAFT_0470 0.30 -0.3
473,713 + B158DRAFT_0470 0.40 -0.5
473,808 + B158DRAFT_0470 0.57 -0.2
473,847 - B158DRAFT_0470 0.64 -2.3
474,065 - -0.0
474,126 + +0.4
474,126 + +0.4
474,134 - -0.1
474,249 + -0.0
474,250 + +0.1
474,250 + +1.7
474,258 - -0.3
474,382 + B158DRAFT_0471 0.50 -0.0
474,387 + B158DRAFT_0471 0.53 +0.5
474,387 + B158DRAFT_0471 0.53 +0.1
474,390 - B158DRAFT_0471 0.54 +1.4
474,395 - B158DRAFT_0471 0.56 +0.4
474,395 - B158DRAFT_0471 0.56 -0.0
474,415 + B158DRAFT_0471 0.65 +1.4
474,423 - B158DRAFT_0471 0.68 +0.2
474,423 - B158DRAFT_0471 0.68 -0.3
474,523 + -0.3
474,533 - +0.6
474,590 + -0.8
474,590 + +1.0
474,607 + -0.3
474,607 + +0.1
474,607 + -0.0
474,615 - -1.2
474,724 + -0.5
474,724 + -0.3
474,732 - -0.1
474,732 - +0.1
474,734 + B158DRAFT_0472 0.10 -0.2
474,742 - B158DRAFT_0472 0.12 -0.2
474,790 - B158DRAFT_0472 0.25 -0.1
474,862 + B158DRAFT_0472 0.44 -0.1
474,884 - B158DRAFT_0472 0.50 -0.8
474,898 + B158DRAFT_0472 0.54 -0.0
474,906 - B158DRAFT_0472 0.56 -0.1
474,928 - B158DRAFT_0472 0.62 -0.3
474,943 + B158DRAFT_0472 0.66 -0.3
474,943 + B158DRAFT_0472 0.66 -0.2
474,996 - B158DRAFT_0472 0.80 -0.0
474,996 - B158DRAFT_0472 0.80 +0.1
475,002 + B158DRAFT_0472 0.81 +0.2
475,010 - B158DRAFT_0472 0.83 -1.2
475,010 - B158DRAFT_0472 0.83 -0.7
475,039 + -0.1

Or see this region's nucleotide sequence