Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0456

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0455 and B158DRAFT_0456 are separated by 85 nucleotidesB158DRAFT_0456 and B158DRAFT_0457 overlap by 1 nucleotides B158DRAFT_0455: B158DRAFT_0455 - Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC, at 455,264 to 456,340 _0455 B158DRAFT_0456: B158DRAFT_0456 - Sugar (pentulose and hexulose) kinases, at 456,426 to 457,970 _0456 B158DRAFT_0457: B158DRAFT_0457 - Zn-dependent oligopeptidases, at 457,970 to 460,015 _0457 Position (kb) 456 457 458Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 455.432 kb on - strand, within B158DRAFT_0455at 455.492 kb on + strand, within B158DRAFT_0455at 455.518 kb on + strand, within B158DRAFT_0455at 455.518 kb on + strand, within B158DRAFT_0455at 455.526 kb on - strand, within B158DRAFT_0455at 455.526 kb on - strand, within B158DRAFT_0455at 455.631 kb on + strand, within B158DRAFT_0455at 455.631 kb on + strand, within B158DRAFT_0455at 455.631 kb on + strand, within B158DRAFT_0455at 455.631 kb on + strand, within B158DRAFT_0455at 455.631 kb on + strand, within B158DRAFT_0455at 455.639 kb on - strand, within B158DRAFT_0455at 455.639 kb on - strand, within B158DRAFT_0455at 455.639 kb on - strand, within B158DRAFT_0455at 455.660 kb on - strand, within B158DRAFT_0455at 455.767 kb on + strand, within B158DRAFT_0455at 455.767 kb on + strand, within B158DRAFT_0455at 455.767 kb on + strand, within B158DRAFT_0455at 455.773 kb on - strand, within B158DRAFT_0455at 455.785 kb on - strand, within B158DRAFT_0455at 455.785 kb on - strand, within B158DRAFT_0455at 455.785 kb on - strand, within B158DRAFT_0455at 455.833 kb on - strand, within B158DRAFT_0455at 455.879 kb on - strand, within B158DRAFT_0455at 455.925 kb on + strand, within B158DRAFT_0455at 455.930 kb on + strand, within B158DRAFT_0455at 455.940 kb on + strand, within B158DRAFT_0455at 456.096 kb on - strand, within B158DRAFT_0455at 456.099 kb on + strand, within B158DRAFT_0455at 456.105 kb on + strand, within B158DRAFT_0455at 456.112 kb on + strand, within B158DRAFT_0455at 456.117 kb on + strand, within B158DRAFT_0455at 456.134 kb on + strand, within B158DRAFT_0455at 456.242 kb on - strandat 456.249 kb on - strandat 456.249 kb on - strandat 456.281 kb on - strandat 456.281 kb on - strandat 456.281 kb on - strandat 456.511 kb on - strandat 456.536 kb on + strandat 456.544 kb on - strandat 456.596 kb on + strand, within B158DRAFT_0456at 456.615 kb on + strand, within B158DRAFT_0456at 456.632 kb on + strand, within B158DRAFT_0456at 456.793 kb on - strand, within B158DRAFT_0456at 456.815 kb on - strand, within B158DRAFT_0456at 456.845 kb on - strand, within B158DRAFT_0456at 456.890 kb on + strand, within B158DRAFT_0456at 456.898 kb on - strand, within B158DRAFT_0456at 456.898 kb on - strand, within B158DRAFT_0456at 456.898 kb on - strand, within B158DRAFT_0456at 456.898 kb on - strand, within B158DRAFT_0456at 456.915 kb on - strand, within B158DRAFT_0456at 456.990 kb on + strand, within B158DRAFT_0456at 456.990 kb on + strand, within B158DRAFT_0456at 457.000 kb on + strand, within B158DRAFT_0456at 457.000 kb on + strand, within B158DRAFT_0456at 457.008 kb on - strand, within B158DRAFT_0456at 457.008 kb on - strand, within B158DRAFT_0456at 457.097 kb on + strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.113 kb on - strand, within B158DRAFT_0456at 457.138 kb on - strand, within B158DRAFT_0456at 457.145 kb on + strand, within B158DRAFT_0456at 457.170 kb on + strand, within B158DRAFT_0456at 457.188 kb on + strand, within B158DRAFT_0456at 457.188 kb on + strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.196 kb on - strand, within B158DRAFT_0456at 457.215 kb on + strand, within B158DRAFT_0456at 457.215 kb on + strand, within B158DRAFT_0456at 457.223 kb on - strand, within B158DRAFT_0456at 457.230 kb on + strand, within B158DRAFT_0456at 457.248 kb on + strand, within B158DRAFT_0456at 457.249 kb on - strand, within B158DRAFT_0456at 457.272 kb on - strand, within B158DRAFT_0456at 457.319 kb on + strand, within B158DRAFT_0456at 457.332 kb on - strand, within B158DRAFT_0456at 457.352 kb on - strand, within B158DRAFT_0456at 457.538 kb on + strand, within B158DRAFT_0456at 457.538 kb on + strand, within B158DRAFT_0456at 457.600 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.610 kb on + strand, within B158DRAFT_0456at 457.615 kb on + strand, within B158DRAFT_0456at 457.618 kb on - strand, within B158DRAFT_0456at 457.618 kb on - strand, within B158DRAFT_0456at 457.627 kb on + strand, within B158DRAFT_0456at 457.627 kb on + strand, within B158DRAFT_0456at 457.633 kb on + strand, within B158DRAFT_0456at 457.635 kb on - strand, within B158DRAFT_0456at 457.641 kb on - strand, within B158DRAFT_0456at 457.661 kb on - strand, within B158DRAFT_0456at 457.661 kb on - strand, within B158DRAFT_0456at 457.663 kb on + strand, within B158DRAFT_0456at 457.680 kb on + strand, within B158DRAFT_0456at 457.688 kb on + strand, within B158DRAFT_0456at 457.688 kb on - strand, within B158DRAFT_0456at 457.725 kb on - strand, within B158DRAFT_0456at 457.727 kb on - strand, within B158DRAFT_0456at 457.753 kb on - strand, within B158DRAFT_0456at 457.770 kb on + strand, within B158DRAFT_0456at 457.792 kb on - strand, within B158DRAFT_0456at 457.792 kb on - strand, within B158DRAFT_0456at 457.800 kb on + strand, within B158DRAFT_0456at 457.803 kb on - strand, within B158DRAFT_0456at 457.827 kb on + strandat 457.832 kb on + strandat 457.840 kb on - strandat 457.863 kb on + strandat 457.898 kb on - strandat 457.899 kb on - strandat 458.000 kb on + strandat 458.000 kb on + strandat 458.008 kb on - strandat 458.061 kb on - strandat 458.061 kb on - strandat 458.220 kb on - strand, within B158DRAFT_0457at 458.233 kb on + strand, within B158DRAFT_0457at 458.233 kb on + strand, within B158DRAFT_0457at 458.241 kb on - strand, within B158DRAFT_0457at 458.298 kb on + strand, within B158DRAFT_0457at 458.298 kb on + strand, within B158DRAFT_0457at 458.306 kb on - strand, within B158DRAFT_0457at 458.306 kb on - strand, within B158DRAFT_0457at 458.351 kb on + strand, within B158DRAFT_0457at 458.357 kb on - strand, within B158DRAFT_0457at 458.370 kb on - strand, within B158DRAFT_0457at 458.377 kb on - strand, within B158DRAFT_0457at 458.390 kb on + strand, within B158DRAFT_0457at 458.432 kb on + strand, within B158DRAFT_0457at 458.440 kb on - strand, within B158DRAFT_0457at 458.440 kb on - strand, within B158DRAFT_0457at 458.540 kb on + strand, within B158DRAFT_0457at 458.562 kb on + strand, within B158DRAFT_0457at 458.584 kb on + strand, within B158DRAFT_0457at 458.585 kb on + strand, within B158DRAFT_0457at 458.585 kb on + strand, within B158DRAFT_0457at 458.593 kb on - strand, within B158DRAFT_0457at 458.609 kb on + strand, within B158DRAFT_0457at 458.617 kb on - strand, within B158DRAFT_0457at 458.664 kb on - strand, within B158DRAFT_0457at 458.839 kb on + strand, within B158DRAFT_0457at 458.839 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.872 kb on + strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.880 kb on - strand, within B158DRAFT_0457at 458.891 kb on + strand, within B158DRAFT_0457

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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455,432 - B158DRAFT_0455 0.16 -1.9
455,492 + B158DRAFT_0455 0.21 -1.5
455,518 + B158DRAFT_0455 0.24 -1.5
455,518 + B158DRAFT_0455 0.24 -2.2
455,526 - B158DRAFT_0455 0.24 -0.6
455,526 - B158DRAFT_0455 0.24 -1.4
455,631 + B158DRAFT_0455 0.34 -0.7
455,631 + B158DRAFT_0455 0.34 -2.0
455,631 + B158DRAFT_0455 0.34 -0.5
455,631 + B158DRAFT_0455 0.34 -1.0
455,631 + B158DRAFT_0455 0.34 -1.4
455,639 - B158DRAFT_0455 0.35 -0.6
455,639 - B158DRAFT_0455 0.35 -1.3
455,639 - B158DRAFT_0455 0.35 -0.1
455,660 - B158DRAFT_0455 0.37 -0.7
455,767 + B158DRAFT_0455 0.47 -3.3
455,767 + B158DRAFT_0455 0.47 -1.5
455,767 + B158DRAFT_0455 0.47 -1.6
455,773 - B158DRAFT_0455 0.47 -2.0
455,785 - B158DRAFT_0455 0.48 -0.7
455,785 - B158DRAFT_0455 0.48 -0.8
455,785 - B158DRAFT_0455 0.48 -1.8
455,833 - B158DRAFT_0455 0.53 -1.0
455,879 - B158DRAFT_0455 0.57 -1.2
455,925 + B158DRAFT_0455 0.61 -1.9
455,930 + B158DRAFT_0455 0.62 -2.9
455,940 + B158DRAFT_0455 0.63 +0.8
456,096 - B158DRAFT_0455 0.77 -0.0
456,099 + B158DRAFT_0455 0.78 -0.6
456,105 + B158DRAFT_0455 0.78 -1.0
456,112 + B158DRAFT_0455 0.79 -0.7
456,117 + B158DRAFT_0455 0.79 -2.0
456,134 + B158DRAFT_0455 0.81 -1.2
456,242 - -1.1
456,249 - -1.6
456,249 - -0.2
456,281 - -1.0
456,281 - -0.8
456,281 - -1.6
456,511 - +0.2
456,536 + -0.0
456,544 - -0.2
456,596 + B158DRAFT_0456 0.11 -0.4
456,615 + B158DRAFT_0456 0.12 -0.2
456,632 + B158DRAFT_0456 0.13 +0.2
456,793 - B158DRAFT_0456 0.24 +0.2
456,815 - B158DRAFT_0456 0.25 -0.9
456,845 - B158DRAFT_0456 0.27 +0.0
456,890 + B158DRAFT_0456 0.30 -0.0
456,898 - B158DRAFT_0456 0.31 -0.8
456,898 - B158DRAFT_0456 0.31 -0.3
456,898 - B158DRAFT_0456 0.31 +0.1
456,898 - B158DRAFT_0456 0.31 -0.9
456,915 - B158DRAFT_0456 0.32 +0.5
456,990 + B158DRAFT_0456 0.37 -1.4
456,990 + B158DRAFT_0456 0.37 -0.9
457,000 + B158DRAFT_0456 0.37 +0.1
457,000 + B158DRAFT_0456 0.37 -0.0
457,008 - B158DRAFT_0456 0.38 -0.3
457,008 - B158DRAFT_0456 0.38 +0.4
457,097 + B158DRAFT_0456 0.43 -1.6
457,113 - B158DRAFT_0456 0.44 -0.7
457,113 - B158DRAFT_0456 0.44 +0.0
457,113 - B158DRAFT_0456 0.44 -0.2
457,138 - B158DRAFT_0456 0.46 -0.6
457,145 + B158DRAFT_0456 0.47 -0.5
457,170 + B158DRAFT_0456 0.48 -0.2
457,188 + B158DRAFT_0456 0.49 +0.1
457,188 + B158DRAFT_0456 0.49 -0.4
457,196 - B158DRAFT_0456 0.50 -0.1
457,196 - B158DRAFT_0456 0.50 -0.2
457,196 - B158DRAFT_0456 0.50 +0.3
457,215 + B158DRAFT_0456 0.51 -0.4
457,215 + B158DRAFT_0456 0.51 -0.4
457,223 - B158DRAFT_0456 0.52 -0.1
457,230 + B158DRAFT_0456 0.52 +0.1
457,248 + B158DRAFT_0456 0.53 -0.1
457,249 - B158DRAFT_0456 0.53 -0.3
457,272 - B158DRAFT_0456 0.55 -0.4
457,319 + B158DRAFT_0456 0.58 -0.4
457,332 - B158DRAFT_0456 0.59 +0.1
457,352 - B158DRAFT_0456 0.60 +0.0
457,538 + B158DRAFT_0456 0.72 -1.0
457,538 + B158DRAFT_0456 0.72 +0.0
457,600 + B158DRAFT_0456 0.76 -0.1
457,610 + B158DRAFT_0456 0.77 +0.0
457,610 + B158DRAFT_0456 0.77 -0.5
457,610 + B158DRAFT_0456 0.77 -0.3
457,615 + B158DRAFT_0456 0.77 -0.4
457,618 - B158DRAFT_0456 0.77 -0.0
457,618 - B158DRAFT_0456 0.77 -0.3
457,627 + B158DRAFT_0456 0.78 +0.2
457,627 + B158DRAFT_0456 0.78 +0.2
457,633 + B158DRAFT_0456 0.78 +0.1
457,635 - B158DRAFT_0456 0.78 -0.2
457,641 - B158DRAFT_0456 0.79 -0.0
457,661 - B158DRAFT_0456 0.80 +0.1
457,661 - B158DRAFT_0456 0.80 -0.5
457,663 + B158DRAFT_0456 0.80 -0.1
457,680 + B158DRAFT_0456 0.81 +0.0
457,688 + B158DRAFT_0456 0.82 -0.2
457,688 - B158DRAFT_0456 0.82 -0.6
457,725 - B158DRAFT_0456 0.84 +0.1
457,727 - B158DRAFT_0456 0.84 -0.7
457,753 - B158DRAFT_0456 0.86 -0.0
457,770 + B158DRAFT_0456 0.87 +0.6
457,792 - B158DRAFT_0456 0.88 +0.2
457,792 - B158DRAFT_0456 0.88 -0.3
457,800 + B158DRAFT_0456 0.89 -0.4
457,803 - B158DRAFT_0456 0.89 -0.1
457,827 + +0.3
457,832 + +1.9
457,840 - -0.1
457,863 + -0.1
457,898 - -0.1
457,899 - -0.3
458,000 + -0.3
458,000 + +0.5
458,008 - +0.0
458,061 - -0.1
458,061 - +0.6
458,220 - B158DRAFT_0457 0.12 -1.1
458,233 + B158DRAFT_0457 0.13 +0.4
458,233 + B158DRAFT_0457 0.13 +0.1
458,241 - B158DRAFT_0457 0.13 +0.1
458,298 + B158DRAFT_0457 0.16 -0.2
458,298 + B158DRAFT_0457 0.16 +0.3
458,306 - B158DRAFT_0457 0.16 +0.1
458,306 - B158DRAFT_0457 0.16 -0.0
458,351 + B158DRAFT_0457 0.19 -0.6
458,357 - B158DRAFT_0457 0.19 +1.6
458,370 - B158DRAFT_0457 0.20 +0.9
458,377 - B158DRAFT_0457 0.20 -0.4
458,390 + B158DRAFT_0457 0.21 +0.3
458,432 + B158DRAFT_0457 0.23 +0.2
458,440 - B158DRAFT_0457 0.23 +0.3
458,440 - B158DRAFT_0457 0.23 -0.8
458,540 + B158DRAFT_0457 0.28 -0.2
458,562 + B158DRAFT_0457 0.29 +0.6
458,584 + B158DRAFT_0457 0.30 +0.6
458,585 + B158DRAFT_0457 0.30 +0.3
458,585 + B158DRAFT_0457 0.30 +0.6
458,593 - B158DRAFT_0457 0.30 +0.1
458,609 + B158DRAFT_0457 0.31 -0.8
458,617 - B158DRAFT_0457 0.32 -0.2
458,664 - B158DRAFT_0457 0.34 -0.4
458,839 + B158DRAFT_0457 0.42 +0.0
458,839 + B158DRAFT_0457 0.42 -0.3
458,872 + B158DRAFT_0457 0.44 +0.4
458,872 + B158DRAFT_0457 0.44 -0.5
458,872 + B158DRAFT_0457 0.44 +0.2
458,880 - B158DRAFT_0457 0.44 +0.3
458,880 - B158DRAFT_0457 0.44 -0.1
458,880 - B158DRAFT_0457 0.44 +0.1
458,891 + B158DRAFT_0457 0.45 +0.3

Or see this region's nucleotide sequence