Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0364

Experiment: m.b. Cisplatin 0.0125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0362 and B158DRAFT_0363 are separated by 72 nucleotidesB158DRAFT_0363 and B158DRAFT_0364 are separated by 134 nucleotidesB158DRAFT_0364 and B158DRAFT_0365 are separated by 78 nucleotides B158DRAFT_0362: B158DRAFT_0362 - Predicted ATPase, at 364,681 to 366,144 _0362 B158DRAFT_0363: B158DRAFT_0363 - Uncharacterized conserved protein, at 366,217 to 366,420 _0363 B158DRAFT_0364: B158DRAFT_0364 - polyphosphate:nucleotide phosphotransferase, PPK2 family, at 366,555 to 367,514 _0364 B158DRAFT_0365: B158DRAFT_0365 - DNA gyrase, B subunit, at 367,593 to 370,019 _0365 Position (kb) 366 367 368Strain fitness (log2 ratio) -1 0 1at 365.555 kb on + strand, within B158DRAFT_0362at 365.555 kb on + strand, within B158DRAFT_0362at 365.563 kb on - strand, within B158DRAFT_0362at 365.702 kb on - strand, within B158DRAFT_0362at 365.707 kb on - strand, within B158DRAFT_0362at 365.720 kb on - strand, within B158DRAFT_0362at 365.720 kb on - strand, within B158DRAFT_0362at 365.755 kb on + strand, within B158DRAFT_0362at 365.786 kb on + strand, within B158DRAFT_0362at 365.787 kb on + strand, within B158DRAFT_0362at 365.787 kb on + strand, within B158DRAFT_0362at 365.787 kb on + strand, within B158DRAFT_0362at 365.787 kb on + strand, within B158DRAFT_0362at 365.789 kb on - strand, within B158DRAFT_0362at 365.795 kb on - strand, within B158DRAFT_0362at 365.805 kb on + strand, within B158DRAFT_0362at 365.808 kb on - strand, within B158DRAFT_0362at 365.808 kb on - strand, within B158DRAFT_0362at 365.846 kb on + strand, within B158DRAFT_0362at 365.940 kb on - strand, within B158DRAFT_0362at 365.953 kb on - strand, within B158DRAFT_0362at 365.972 kb on - strand, within B158DRAFT_0362at 366.009 kb on + strandat 366.009 kb on + strandat 366.009 kb on + strandat 366.009 kb on + strandat 366.017 kb on - strandat 366.017 kb on - strandat 366.017 kb on - strandat 366.017 kb on - strandat 366.024 kb on - strandat 366.083 kb on + strandat 366.083 kb on + strandat 366.083 kb on + strandat 366.083 kb on + strandat 366.083 kb on + strandat 366.083 kb on + strandat 366.091 kb on - strandat 366.091 kb on - strandat 366.091 kb on - strandat 366.115 kb on + strandat 366.122 kb on + strandat 366.122 kb on + strandat 366.137 kb on - strandat 366.205 kb on + strandat 366.209 kb on + strandat 366.209 kb on + strandat 366.215 kb on + strandat 366.267 kb on - strand, within B158DRAFT_0363at 366.305 kb on - strand, within B158DRAFT_0363at 366.305 kb on - strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.311 kb on + strand, within B158DRAFT_0363at 366.319 kb on - strand, within B158DRAFT_0363at 366.319 kb on - strand, within B158DRAFT_0363at 366.319 kb on - strand, within B158DRAFT_0363at 366.366 kb on + strand, within B158DRAFT_0363at 366.459 kb on + strandat 366.827 kb on + strand, within B158DRAFT_0364at 366.830 kb on - strand, within B158DRAFT_0364at 366.896 kb on + strand, within B158DRAFT_0364at 366.904 kb on - strand, within B158DRAFT_0364at 366.952 kb on - strand, within B158DRAFT_0364at 366.956 kb on - strand, within B158DRAFT_0364at 366.967 kb on - strand, within B158DRAFT_0364at 366.972 kb on - strand, within B158DRAFT_0364at 367.008 kb on + strand, within B158DRAFT_0364at 367.094 kb on + strand, within B158DRAFT_0364at 367.094 kb on + strand, within B158DRAFT_0364at 367.094 kb on + strand, within B158DRAFT_0364at 367.102 kb on - strand, within B158DRAFT_0364at 367.108 kb on + strand, within B158DRAFT_0364at 367.116 kb on - strand, within B158DRAFT_0364at 367.314 kb on - strand, within B158DRAFT_0364at 367.316 kb on + strand, within B158DRAFT_0364at 367.316 kb on + strand, within B158DRAFT_0364at 367.316 kb on + strand, within B158DRAFT_0364at 367.316 kb on + strand, within B158DRAFT_0364at 367.324 kb on - strand, within B158DRAFT_0364at 367.324 kb on - strand, within B158DRAFT_0364at 367.324 kb on - strand, within B158DRAFT_0364at 367.324 kb on - strand, within B158DRAFT_0364at 367.331 kb on + strand, within B158DRAFT_0364at 367.331 kb on + strand, within B158DRAFT_0364at 367.339 kb on - strand, within B158DRAFT_0364at 367.372 kb on - strand, within B158DRAFT_0364at 367.405 kb on - strand, within B158DRAFT_0364at 367.462 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.0125 mg/ml
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365,555 + B158DRAFT_0362 0.60 +0.0
365,555 + B158DRAFT_0362 0.60 +0.1
365,563 - B158DRAFT_0362 0.60 -0.0
365,702 - B158DRAFT_0362 0.70 -0.1
365,707 - B158DRAFT_0362 0.70 -0.4
365,720 - B158DRAFT_0362 0.71 -0.1
365,720 - B158DRAFT_0362 0.71 -1.1
365,755 + B158DRAFT_0362 0.73 -0.5
365,786 + B158DRAFT_0362 0.75 -0.6
365,787 + B158DRAFT_0362 0.76 -0.0
365,787 + B158DRAFT_0362 0.76 -0.5
365,787 + B158DRAFT_0362 0.76 +0.4
365,787 + B158DRAFT_0362 0.76 +0.3
365,789 - B158DRAFT_0362 0.76 +0.0
365,795 - B158DRAFT_0362 0.76 -0.1
365,805 + B158DRAFT_0362 0.77 -0.2
365,808 - B158DRAFT_0362 0.77 -0.1
365,808 - B158DRAFT_0362 0.77 -0.1
365,846 + B158DRAFT_0362 0.80 -0.4
365,940 - B158DRAFT_0362 0.86 +0.0
365,953 - B158DRAFT_0362 0.87 -0.6
365,972 - B158DRAFT_0362 0.88 +0.6
366,009 + -0.2
366,009 + +0.0
366,009 + +0.0
366,009 + -0.1
366,017 - +0.1
366,017 - -0.2
366,017 - +0.2
366,017 - -0.5
366,024 - -0.2
366,083 + -0.3
366,083 + -1.6
366,083 + +0.1
366,083 + -0.1
366,083 + +1.1
366,083 + +0.3
366,091 - -0.6
366,091 - +0.1
366,091 - -0.2
366,115 + -0.3
366,122 + -0.0
366,122 + -1.1
366,137 - +0.2
366,205 + -0.3
366,209 + -0.6
366,209 + -0.0
366,215 + +0.0
366,267 - B158DRAFT_0363 0.25 -1.0
366,305 - B158DRAFT_0363 0.43 -0.1
366,305 - B158DRAFT_0363 0.43 -0.3
366,311 + B158DRAFT_0363 0.46 -1.1
366,311 + B158DRAFT_0363 0.46 +0.6
366,311 + B158DRAFT_0363 0.46 +0.2
366,311 + B158DRAFT_0363 0.46 -0.7
366,311 + B158DRAFT_0363 0.46 -0.1
366,311 + B158DRAFT_0363 0.46 -0.6
366,319 - B158DRAFT_0363 0.50 -0.4
366,319 - B158DRAFT_0363 0.50 +0.5
366,319 - B158DRAFT_0363 0.50 -0.1
366,366 + B158DRAFT_0363 0.73 -0.3
366,459 + +0.2
366,827 + B158DRAFT_0364 0.28 -0.3
366,830 - B158DRAFT_0364 0.29 -0.6
366,896 + B158DRAFT_0364 0.36 -0.2
366,904 - B158DRAFT_0364 0.36 -0.3
366,952 - B158DRAFT_0364 0.41 +1.5
366,956 - B158DRAFT_0364 0.42 -1.1
366,967 - B158DRAFT_0364 0.43 -1.6
366,972 - B158DRAFT_0364 0.43 +0.2
367,008 + B158DRAFT_0364 0.47 -0.4
367,094 + B158DRAFT_0364 0.56 +0.1
367,094 + B158DRAFT_0364 0.56 -1.5
367,094 + B158DRAFT_0364 0.56 +0.6
367,102 - B158DRAFT_0364 0.57 -1.1
367,108 + B158DRAFT_0364 0.58 -0.4
367,116 - B158DRAFT_0364 0.58 -0.2
367,314 - B158DRAFT_0364 0.79 -0.4
367,316 + B158DRAFT_0364 0.79 -0.4
367,316 + B158DRAFT_0364 0.79 -0.0
367,316 + B158DRAFT_0364 0.79 -0.2
367,316 + B158DRAFT_0364 0.79 +0.7
367,324 - B158DRAFT_0364 0.80 -0.9
367,324 - B158DRAFT_0364 0.80 +0.7
367,324 - B158DRAFT_0364 0.80 -0.3
367,324 - B158DRAFT_0364 0.80 -0.2
367,331 + B158DRAFT_0364 0.81 -0.5
367,331 + B158DRAFT_0364 0.81 -0.1
367,339 - B158DRAFT_0364 0.82 +0.4
367,372 - B158DRAFT_0364 0.85 -0.4
367,405 - B158DRAFT_0364 0.89 -0.4
367,462 - -0.0

Or see this region's nucleotide sequence