Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2255

Experiment: m.b. 2-Furfuraldehyde 0.035 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2254 and B158DRAFT_2255 are separated by 90 nucleotidesB158DRAFT_2255 and B158DRAFT_2256 are separated by 134 nucleotidesB158DRAFT_2256 and B158DRAFT_2257 are separated by 61 nucleotides B158DRAFT_2254: B158DRAFT_2254 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 416,789 to 417,970 _2254 B158DRAFT_2255: B158DRAFT_2255 - Molecular chaperone (small heat shock protein), at 418,061 to 418,483 _2255 B158DRAFT_2256: B158DRAFT_2256 - Universal stress protein UspA and related nucleotide-binding proteins, at 418,618 to 419,073 _2256 B158DRAFT_2257: B158DRAFT_2257 - Predicted exporters of the RND superfamily, at 419,135 to 421,627 _2257 Position (kb) 418 419Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 417.087 kb on + strand, within B158DRAFT_2254at 417.134 kb on + strand, within B158DRAFT_2254at 417.158 kb on + strand, within B158DRAFT_2254at 417.199 kb on - strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.233 kb on + strand, within B158DRAFT_2254at 417.256 kb on + strand, within B158DRAFT_2254at 417.272 kb on + strand, within B158DRAFT_2254at 417.278 kb on + strand, within B158DRAFT_2254at 417.289 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.356 kb on + strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.368 kb on + strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.434 kb on - strand, within B158DRAFT_2254at 417.444 kb on - strand, within B158DRAFT_2254at 417.460 kb on - strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.535 kb on - strand, within B158DRAFT_2254at 417.545 kb on + strand, within B158DRAFT_2254at 417.552 kb on + strand, within B158DRAFT_2254at 417.650 kb on + strand, within B158DRAFT_2254at 417.700 kb on - strand, within B158DRAFT_2254at 417.734 kb on + strand, within B158DRAFT_2254at 417.746 kb on + strand, within B158DRAFT_2254at 417.777 kb on - strand, within B158DRAFT_2254at 417.777 kb on - strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.922 kb on - strandat 417.927 kb on - strandat 417.932 kb on + strandat 417.993 kb on + strandat 418.023 kb on + strandat 418.031 kb on + strandat 418.159 kb on - strand, within B158DRAFT_2255at 418.164 kb on - strand, within B158DRAFT_2255at 418.169 kb on - strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.324 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.371 kb on + strand, within B158DRAFT_2255at 418.372 kb on - strand, within B158DRAFT_2255at 418.388 kb on + strand, within B158DRAFT_2255at 418.396 kb on + strand, within B158DRAFT_2255at 418.409 kb on + strand, within B158DRAFT_2255at 418.461 kb on + strandat 418.469 kb on - strandat 418.510 kb on - strandat 418.569 kb on + strandat 418.577 kb on - strandat 418.616 kb on - strandat 418.616 kb on - strandat 418.666 kb on + strand, within B158DRAFT_2256at 418.674 kb on - strand, within B158DRAFT_2256at 418.887 kb on + strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.925 kb on + strand, within B158DRAFT_2256at 418.933 kb on - strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256at 418.987 kb on - strand, within B158DRAFT_2256at 419.033 kb on + strandat 419.068 kb on + strandat 419.158 kb on + strandat 419.188 kb on + strandat 419.196 kb on - strandat 419.196 kb on - strandat 419.196 kb on - strandat 419.293 kb on - strandat 419.297 kb on + strandat 419.297 kb on + strandat 419.305 kb on - strandat 419.312 kb on + strandat 419.312 kb on + strandat 419.312 kb on - strandat 419.320 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol%
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417,087 + B158DRAFT_2254 0.25 +0.1
417,134 + B158DRAFT_2254 0.29 -0.8
417,158 + B158DRAFT_2254 0.31 -0.3
417,199 - B158DRAFT_2254 0.35 -0.0
417,221 + B158DRAFT_2254 0.37 -0.1
417,221 + B158DRAFT_2254 0.37 -0.3
417,221 + B158DRAFT_2254 0.37 +0.1
417,221 + B158DRAFT_2254 0.37 +0.5
417,229 - B158DRAFT_2254 0.37 -0.2
417,229 - B158DRAFT_2254 0.37 +1.4
417,233 + B158DRAFT_2254 0.38 -0.2
417,256 + B158DRAFT_2254 0.40 -0.2
417,272 + B158DRAFT_2254 0.41 -0.2
417,278 + B158DRAFT_2254 0.41 -0.7
417,289 + B158DRAFT_2254 0.42 -0.1
417,350 + B158DRAFT_2254 0.47 -0.1
417,350 + B158DRAFT_2254 0.47 -0.1
417,350 + B158DRAFT_2254 0.47 +0.2
417,350 + B158DRAFT_2254 0.47 -0.2
417,356 + B158DRAFT_2254 0.48 +0.1
417,358 - B158DRAFT_2254 0.48 -0.2
417,358 - B158DRAFT_2254 0.48 -0.7
417,358 - B158DRAFT_2254 0.48 +0.0
417,358 - B158DRAFT_2254 0.48 -0.1
417,358 - B158DRAFT_2254 0.48 +0.2
417,358 - B158DRAFT_2254 0.48 -0.5
417,358 - B158DRAFT_2254 0.48 +0.1
417,358 - B158DRAFT_2254 0.48 -0.0
417,358 - B158DRAFT_2254 0.48 -1.1
417,368 + B158DRAFT_2254 0.49 -0.8
417,376 - B158DRAFT_2254 0.50 +0.1
417,376 - B158DRAFT_2254 0.50 +0.6
417,434 - B158DRAFT_2254 0.55 -0.4
417,444 - B158DRAFT_2254 0.55 -0.4
417,460 - B158DRAFT_2254 0.57 -0.1
417,483 + B158DRAFT_2254 0.59 -0.4
417,483 + B158DRAFT_2254 0.59 +1.0
417,535 - B158DRAFT_2254 0.63 -0.5
417,545 + B158DRAFT_2254 0.64 +0.1
417,552 + B158DRAFT_2254 0.65 +0.1
417,650 + B158DRAFT_2254 0.73 -1.3
417,700 - B158DRAFT_2254 0.77 +0.1
417,734 + B158DRAFT_2254 0.80 +0.3
417,746 + B158DRAFT_2254 0.81 -0.4
417,777 - B158DRAFT_2254 0.84 +0.1
417,777 - B158DRAFT_2254 0.84 -0.2
417,808 + B158DRAFT_2254 0.86 -0.1
417,808 + B158DRAFT_2254 0.86 -0.3
417,808 + B158DRAFT_2254 0.86 +1.0
417,922 - -0.3
417,927 - -0.9
417,932 + +0.4
417,993 + +0.4
418,023 + +0.2
418,031 + +0.2
418,159 - B158DRAFT_2255 0.23 -0.7
418,164 - B158DRAFT_2255 0.24 -0.2
418,169 - B158DRAFT_2255 0.26 -0.0
418,180 + B158DRAFT_2255 0.28 -0.7
418,180 + B158DRAFT_2255 0.28 +0.2
418,180 + B158DRAFT_2255 0.28 -0.9
418,180 + B158DRAFT_2255 0.28 +0.3
418,180 + B158DRAFT_2255 0.28 -0.5
418,180 + B158DRAFT_2255 0.28 +0.1
418,180 + B158DRAFT_2255 0.28 +0.1
418,180 + B158DRAFT_2255 0.28 -0.4
418,180 + B158DRAFT_2255 0.28 +0.2
418,180 + B158DRAFT_2255 0.28 -0.9
418,180 + B158DRAFT_2255 0.28 -0.8
418,180 + B158DRAFT_2255 0.28 +0.1
418,180 + B158DRAFT_2255 0.28 -0.8
418,180 + B158DRAFT_2255 0.28 +0.3
418,188 - B158DRAFT_2255 0.30 +0.0
418,188 - B158DRAFT_2255 0.30 +0.2
418,188 - B158DRAFT_2255 0.30 +0.5
418,188 - B158DRAFT_2255 0.30 -0.1
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 -0.5
418,188 - B158DRAFT_2255 0.30 -0.9
418,188 - B158DRAFT_2255 0.30 +0.1
418,188 - B158DRAFT_2255 0.30 -0.0
418,188 - B158DRAFT_2255 0.30 +0.1
418,188 - B158DRAFT_2255 0.30 +0.2
418,188 - B158DRAFT_2255 0.30 +0.0
418,188 - B158DRAFT_2255 0.30 -0.5
418,188 - B158DRAFT_2255 0.30 -0.1
418,188 - B158DRAFT_2255 0.30 -0.6
418,188 - B158DRAFT_2255 0.30 +0.7
418,188 - B158DRAFT_2255 0.30 -0.7
418,188 - B158DRAFT_2255 0.30 +0.3
418,188 - B158DRAFT_2255 0.30 +0.4
418,324 + B158DRAFT_2255 0.62 -0.2
418,364 + B158DRAFT_2255 0.72 +0.8
418,364 + B158DRAFT_2255 0.72 +0.5
418,371 + B158DRAFT_2255 0.73 -0.3
418,372 - B158DRAFT_2255 0.74 -0.3
418,388 + B158DRAFT_2255 0.77 -0.2
418,396 + B158DRAFT_2255 0.79 -0.5
418,409 + B158DRAFT_2255 0.82 -0.6
418,461 + -0.6
418,469 - +0.3
418,510 - +0.0
418,569 + +0.0
418,577 - +0.7
418,616 - +0.3
418,616 - +0.0
418,666 + B158DRAFT_2256 0.11 +0.1
418,674 - B158DRAFT_2256 0.12 +0.3
418,887 + B158DRAFT_2256 0.59 +0.4
418,895 - B158DRAFT_2256 0.61 -0.1
418,895 - B158DRAFT_2256 0.61 +0.5
418,925 + B158DRAFT_2256 0.67 +0.3
418,933 - B158DRAFT_2256 0.69 -0.4
418,964 + B158DRAFT_2256 0.76 +0.7
418,964 + B158DRAFT_2256 0.76 -0.1
418,987 - B158DRAFT_2256 0.81 -0.2
419,033 + -0.0
419,068 + +0.3
419,158 + -0.1
419,188 + -0.1
419,196 - -4.6
419,196 - -2.1
419,196 - -2.7
419,293 - -2.1
419,297 + -2.1
419,297 + -2.1
419,305 - -0.1
419,312 + -2.4
419,312 + -1.1
419,312 - -2.1
419,320 - -2.1

Or see this region's nucleotide sequence