Experiment: m.b. 2-Furfuraldehyde 0.035 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1914 and B158DRAFT_1915 overlap by 4 nucleotides B158DRAFT_1915 and B158DRAFT_1916 are separated by 20 nucleotides B158DRAFT_1916 and B158DRAFT_1917 are separated by 20 nucleotides B158DRAFT_1917 and B158DRAFT_1918 are separated by 56 nucleotides
B158DRAFT_1914: B158DRAFT_1914 - 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78), at 50,013 to 50,498
_1914
B158DRAFT_1915: B158DRAFT_1915 - NusB antitermination factor, at 50,495 to 50,923
_1915
B158DRAFT_1916: B158DRAFT_1916 - thiamine-monophosphate kinase, at 50,944 to 51,909
_1916
B158DRAFT_1917: B158DRAFT_1917 - phosphatidylglycerophosphatase (EC 3.1.3.27), at 51,930 to 52,403
_1917
B158DRAFT_1918: B158DRAFT_1918 - 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7), at 52,460 to 54,298
_1918
Position (kb) 50
51
52 Strain fitness (log2 ratio) -1
0
1 at 50.893 kb on + strand at 50.903 kb on + strand at 50.930 kb on + strand at 52.416 kb on + strand at 52.416 kb on + strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.427 kb on - strand at 52.439 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol% remove 50,893 + +0.1 50,903 + +0.1 50,930 + -1.3 52,416 + -0.0 52,416 + -0.5 52,424 - +0.4 52,424 - -0.4 52,424 - -0.7 52,427 - +0.0 52,439 + +0.5
Or see this region's nucleotide sequence