Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1767

Experiment: m.b. 2-Furfuraldehyde 0.035 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1766 and B158DRAFT_1767 overlap by 8 nucleotidesB158DRAFT_1767 and B158DRAFT_1768 overlap by 1 nucleotides B158DRAFT_1766: B158DRAFT_1766 - poly-beta-1,6 N-acetyl-D-glucosamine synthase, at 1,845,350 to 1,846,612 _1766 B158DRAFT_1767: B158DRAFT_1767 - poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, at 1,846,605 to 1,848,584 _1767 B158DRAFT_1768: B158DRAFT_1768 - poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA, at 1,848,584 to 1,851,112 _1768 Position (kb) 1846 1847 1848 1849Strain fitness (log2 ratio) -2 -1 0 1 2at 1845.677 kb on + strand, within B158DRAFT_1766at 1845.677 kb on + strand, within B158DRAFT_1766at 1845.685 kb on - strand, within B158DRAFT_1766at 1845.685 kb on - strand, within B158DRAFT_1766at 1845.685 kb on - strand, within B158DRAFT_1766at 1845.685 kb on - strand, within B158DRAFT_1766at 1845.685 kb on - strand, within B158DRAFT_1766at 1845.698 kb on + strand, within B158DRAFT_1766at 1845.722 kb on - strand, within B158DRAFT_1766at 1845.777 kb on - strand, within B158DRAFT_1766at 1845.779 kb on + strand, within B158DRAFT_1766at 1845.806 kb on + strand, within B158DRAFT_1766at 1845.849 kb on + strand, within B158DRAFT_1766at 1845.849 kb on + strand, within B158DRAFT_1766at 1845.849 kb on + strand, within B158DRAFT_1766at 1845.850 kb on - strand, within B158DRAFT_1766at 1845.857 kb on - strand, within B158DRAFT_1766at 1845.857 kb on - strand, within B158DRAFT_1766at 1845.857 kb on - strand, within B158DRAFT_1766at 1845.857 kb on - strand, within B158DRAFT_1766at 1845.891 kb on + strand, within B158DRAFT_1766at 1845.900 kb on + strand, within B158DRAFT_1766at 1845.922 kb on + strand, within B158DRAFT_1766at 1845.945 kb on - strand, within B158DRAFT_1766at 1845.955 kb on - strand, within B158DRAFT_1766at 1845.990 kb on + strand, within B158DRAFT_1766at 1845.998 kb on - strand, within B158DRAFT_1766at 1846.020 kb on + strand, within B158DRAFT_1766at 1846.121 kb on - strand, within B158DRAFT_1766at 1846.122 kb on - strand, within B158DRAFT_1766at 1846.122 kb on - strand, within B158DRAFT_1766at 1846.165 kb on - strand, within B158DRAFT_1766at 1846.230 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.251 kb on + strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.259 kb on - strand, within B158DRAFT_1766at 1846.261 kb on + strand, within B158DRAFT_1766at 1846.266 kb on + strand, within B158DRAFT_1766at 1846.269 kb on - strand, within B158DRAFT_1766at 1846.269 kb on - strand, within B158DRAFT_1766at 1846.274 kb on - strand, within B158DRAFT_1766at 1846.274 kb on - strand, within B158DRAFT_1766at 1846.313 kb on + strand, within B158DRAFT_1766at 1846.328 kb on + strand, within B158DRAFT_1766at 1846.328 kb on + strand, within B158DRAFT_1766at 1846.338 kb on + strand, within B158DRAFT_1766at 1846.341 kb on - strand, within B158DRAFT_1766at 1846.407 kb on - strand, within B158DRAFT_1766at 1846.417 kb on + strand, within B158DRAFT_1766at 1846.420 kb on - strand, within B158DRAFT_1766at 1846.485 kb on + strand, within B158DRAFT_1766at 1846.485 kb on + strand, within B158DRAFT_1766at 1846.485 kb on + strand, within B158DRAFT_1766at 1846.485 kb on + strand, within B158DRAFT_1766at 1846.485 kb on + strand, within B158DRAFT_1766at 1846.490 kb on + strandat 1846.493 kb on - strandat 1846.493 kb on - strandat 1846.498 kb on - strandat 1846.643 kb on - strandat 1846.664 kb on + strandat 1846.737 kb on - strandat 1846.789 kb on - strandat 1846.821 kb on + strand, within B158DRAFT_1767at 1846.914 kb on - strand, within B158DRAFT_1767at 1846.923 kb on - strand, within B158DRAFT_1767at 1846.942 kb on + strand, within B158DRAFT_1767at 1847.122 kb on - strand, within B158DRAFT_1767at 1847.122 kb on - strand, within B158DRAFT_1767at 1847.153 kb on - strand, within B158DRAFT_1767at 1847.166 kb on - strand, within B158DRAFT_1767at 1847.177 kb on + strand, within B158DRAFT_1767at 1847.177 kb on + strand, within B158DRAFT_1767at 1847.185 kb on - strand, within B158DRAFT_1767at 1847.185 kb on - strand, within B158DRAFT_1767at 1847.185 kb on - strand, within B158DRAFT_1767at 1847.242 kb on + strand, within B158DRAFT_1767at 1847.336 kb on + strand, within B158DRAFT_1767at 1847.336 kb on + strand, within B158DRAFT_1767at 1847.415 kb on + strand, within B158DRAFT_1767at 1847.519 kb on - strand, within B158DRAFT_1767at 1847.601 kb on - strand, within B158DRAFT_1767at 1847.740 kb on - strand, within B158DRAFT_1767at 1847.742 kb on + strand, within B158DRAFT_1767at 1847.838 kb on + strand, within B158DRAFT_1767at 1847.838 kb on + strand, within B158DRAFT_1767at 1847.838 kb on + strand, within B158DRAFT_1767at 1847.838 kb on + strand, within B158DRAFT_1767at 1847.838 kb on + strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.846 kb on - strand, within B158DRAFT_1767at 1847.862 kb on + strand, within B158DRAFT_1767at 1847.891 kb on - strand, within B158DRAFT_1767at 1847.891 kb on - strand, within B158DRAFT_1767at 1847.891 kb on - strand, within B158DRAFT_1767at 1847.951 kb on - strand, within B158DRAFT_1767at 1847.956 kb on + strand, within B158DRAFT_1767at 1847.964 kb on - strand, within B158DRAFT_1767at 1847.977 kb on + strand, within B158DRAFT_1767at 1848.037 kb on + strand, within B158DRAFT_1767at 1848.047 kb on + strand, within B158DRAFT_1767at 1848.055 kb on - strand, within B158DRAFT_1767at 1848.142 kb on - strand, within B158DRAFT_1767at 1848.152 kb on - strand, within B158DRAFT_1767at 1848.213 kb on - strand, within B158DRAFT_1767at 1848.283 kb on - strand, within B158DRAFT_1767at 1848.402 kb on + strandat 1848.410 kb on - strandat 1848.422 kb on + strandat 1848.437 kb on + strandat 1848.618 kb on + strandat 1848.626 kb on - strandat 1848.628 kb on + strandat 1848.652 kb on + strandat 1848.660 kb on - strandat 1848.853 kb on - strand, within B158DRAFT_1768at 1848.853 kb on - strand, within B158DRAFT_1768at 1848.862 kb on + strand, within B158DRAFT_1768at 1849.012 kb on + strand, within B158DRAFT_1768at 1849.189 kb on + strand, within B158DRAFT_1768at 1849.189 kb on + strand, within B158DRAFT_1768at 1849.197 kb on + strand, within B158DRAFT_1768at 1849.197 kb on + strand, within B158DRAFT_1768at 1849.205 kb on - strand, within B158DRAFT_1768at 1849.205 kb on - strand, within B158DRAFT_1768at 1849.256 kb on - strand, within B158DRAFT_1768at 1849.383 kb on - strand, within B158DRAFT_1768at 1849.410 kb on + strand, within B158DRAFT_1768at 1849.410 kb on + strand, within B158DRAFT_1768at 1849.410 kb on + strand, within B158DRAFT_1768at 1849.410 kb on + strand, within B158DRAFT_1768at 1849.418 kb on - strand, within B158DRAFT_1768at 1849.418 kb on - strand, within B158DRAFT_1768at 1849.418 kb on - strand, within B158DRAFT_1768at 1849.418 kb on - strand, within B158DRAFT_1768at 1849.418 kb on - strand, within B158DRAFT_1768at 1849.474 kb on + strand, within B158DRAFT_1768

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 2-Furfuraldehyde 0.035 vol%
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1,845,677 + B158DRAFT_1766 0.26 +0.1
1,845,677 + B158DRAFT_1766 0.26 +1.2
1,845,685 - B158DRAFT_1766 0.27 +0.3
1,845,685 - B158DRAFT_1766 0.27 -0.5
1,845,685 - B158DRAFT_1766 0.27 -0.2
1,845,685 - B158DRAFT_1766 0.27 +0.1
1,845,685 - B158DRAFT_1766 0.27 +0.7
1,845,698 + B158DRAFT_1766 0.28 +0.3
1,845,722 - B158DRAFT_1766 0.29 -0.2
1,845,777 - B158DRAFT_1766 0.34 -0.4
1,845,779 + B158DRAFT_1766 0.34 -0.3
1,845,806 + B158DRAFT_1766 0.36 +0.1
1,845,849 + B158DRAFT_1766 0.40 -0.2
1,845,849 + B158DRAFT_1766 0.40 +1.9
1,845,849 + B158DRAFT_1766 0.40 +0.0
1,845,850 - B158DRAFT_1766 0.40 -0.1
1,845,857 - B158DRAFT_1766 0.40 +0.4
1,845,857 - B158DRAFT_1766 0.40 +0.0
1,845,857 - B158DRAFT_1766 0.40 -0.6
1,845,857 - B158DRAFT_1766 0.40 -0.3
1,845,891 + B158DRAFT_1766 0.43 -0.7
1,845,900 + B158DRAFT_1766 0.44 -0.2
1,845,922 + B158DRAFT_1766 0.45 +0.5
1,845,945 - B158DRAFT_1766 0.47 +0.7
1,845,955 - B158DRAFT_1766 0.48 +0.1
1,845,990 + B158DRAFT_1766 0.51 +0.2
1,845,998 - B158DRAFT_1766 0.51 +0.1
1,846,020 + B158DRAFT_1766 0.53 -0.3
1,846,121 - B158DRAFT_1766 0.61 +0.3
1,846,122 - B158DRAFT_1766 0.61 -1.6
1,846,122 - B158DRAFT_1766 0.61 -0.2
1,846,165 - B158DRAFT_1766 0.65 +0.2
1,846,230 + B158DRAFT_1766 0.70 +0.3
1,846,251 + B158DRAFT_1766 0.71 +0.1
1,846,251 + B158DRAFT_1766 0.71 -0.1
1,846,251 + B158DRAFT_1766 0.71 +0.4
1,846,251 + B158DRAFT_1766 0.71 -0.8
1,846,251 + B158DRAFT_1766 0.71 +0.1
1,846,251 + B158DRAFT_1766 0.71 +0.5
1,846,251 + B158DRAFT_1766 0.71 -0.1
1,846,251 + B158DRAFT_1766 0.71 -0.4
1,846,259 - B158DRAFT_1766 0.72 -0.2
1,846,259 - B158DRAFT_1766 0.72 -0.1
1,846,259 - B158DRAFT_1766 0.72 +0.5
1,846,259 - B158DRAFT_1766 0.72 +0.5
1,846,259 - B158DRAFT_1766 0.72 +0.2
1,846,259 - B158DRAFT_1766 0.72 +0.2
1,846,261 + B158DRAFT_1766 0.72 +0.3
1,846,266 + B158DRAFT_1766 0.73 +0.4
1,846,269 - B158DRAFT_1766 0.73 -0.2
1,846,269 - B158DRAFT_1766 0.73 -0.1
1,846,274 - B158DRAFT_1766 0.73 +0.9
1,846,274 - B158DRAFT_1766 0.73 +0.8
1,846,313 + B158DRAFT_1766 0.76 -0.7
1,846,328 + B158DRAFT_1766 0.77 +0.6
1,846,328 + B158DRAFT_1766 0.77 -0.4
1,846,338 + B158DRAFT_1766 0.78 +0.9
1,846,341 - B158DRAFT_1766 0.78 -0.1
1,846,407 - B158DRAFT_1766 0.84 +0.6
1,846,417 + B158DRAFT_1766 0.84 -0.3
1,846,420 - B158DRAFT_1766 0.85 -0.8
1,846,485 + B158DRAFT_1766 0.90 -0.4
1,846,485 + B158DRAFT_1766 0.90 -0.4
1,846,485 + B158DRAFT_1766 0.90 -0.2
1,846,485 + B158DRAFT_1766 0.90 -0.4
1,846,485 + B158DRAFT_1766 0.90 -0.1
1,846,490 + +0.3
1,846,493 - -0.5
1,846,493 - +0.2
1,846,498 - -0.0
1,846,643 - -0.3
1,846,664 + +0.2
1,846,737 - +0.6
1,846,789 - +1.7
1,846,821 + B158DRAFT_1767 0.11 -1.2
1,846,914 - B158DRAFT_1767 0.16 -0.2
1,846,923 - B158DRAFT_1767 0.16 -1.8
1,846,942 + B158DRAFT_1767 0.17 -0.5
1,847,122 - B158DRAFT_1767 0.26 +0.1
1,847,122 - B158DRAFT_1767 0.26 -0.4
1,847,153 - B158DRAFT_1767 0.28 -0.3
1,847,166 - B158DRAFT_1767 0.28 -0.6
1,847,177 + B158DRAFT_1767 0.29 +0.2
1,847,177 + B158DRAFT_1767 0.29 +0.1
1,847,185 - B158DRAFT_1767 0.29 +0.0
1,847,185 - B158DRAFT_1767 0.29 +0.4
1,847,185 - B158DRAFT_1767 0.29 -0.3
1,847,242 + B158DRAFT_1767 0.32 -0.2
1,847,336 + B158DRAFT_1767 0.37 +0.5
1,847,336 + B158DRAFT_1767 0.37 -1.4
1,847,415 + B158DRAFT_1767 0.41 +0.2
1,847,519 - B158DRAFT_1767 0.46 -0.4
1,847,601 - B158DRAFT_1767 0.50 -0.1
1,847,740 - B158DRAFT_1767 0.57 -0.0
1,847,742 + B158DRAFT_1767 0.57 -0.8
1,847,838 + B158DRAFT_1767 0.62 -0.6
1,847,838 + B158DRAFT_1767 0.62 -0.4
1,847,838 + B158DRAFT_1767 0.62 +0.1
1,847,838 + B158DRAFT_1767 0.62 -0.9
1,847,838 + B158DRAFT_1767 0.62 -0.1
1,847,846 - B158DRAFT_1767 0.63 -0.1
1,847,846 - B158DRAFT_1767 0.63 -0.1
1,847,846 - B158DRAFT_1767 0.63 +0.0
1,847,846 - B158DRAFT_1767 0.63 +0.0
1,847,846 - B158DRAFT_1767 0.63 -0.5
1,847,846 - B158DRAFT_1767 0.63 -0.5
1,847,846 - B158DRAFT_1767 0.63 -0.7
1,847,846 - B158DRAFT_1767 0.63 +0.1
1,847,862 + B158DRAFT_1767 0.63 +0.1
1,847,891 - B158DRAFT_1767 0.65 -0.3
1,847,891 - B158DRAFT_1767 0.65 -1.5
1,847,891 - B158DRAFT_1767 0.65 -0.2
1,847,951 - B158DRAFT_1767 0.68 +0.3
1,847,956 + B158DRAFT_1767 0.68 +0.2
1,847,964 - B158DRAFT_1767 0.69 +0.7
1,847,977 + B158DRAFT_1767 0.69 +0.1
1,848,037 + B158DRAFT_1767 0.72 +1.5
1,848,047 + B158DRAFT_1767 0.73 +0.1
1,848,055 - B158DRAFT_1767 0.73 -0.2
1,848,142 - B158DRAFT_1767 0.78 +0.0
1,848,152 - B158DRAFT_1767 0.78 +0.1
1,848,213 - B158DRAFT_1767 0.81 -0.8
1,848,283 - B158DRAFT_1767 0.85 -0.2
1,848,402 + -0.4
1,848,410 - +0.3
1,848,422 + +1.0
1,848,437 + -0.1
1,848,618 + +0.0
1,848,626 - -0.4
1,848,628 + -0.0
1,848,652 + -0.2
1,848,660 - -0.3
1,848,853 - B158DRAFT_1768 0.11 -0.8
1,848,853 - B158DRAFT_1768 0.11 +0.2
1,848,862 + B158DRAFT_1768 0.11 -0.5
1,849,012 + B158DRAFT_1768 0.17 +0.3
1,849,189 + B158DRAFT_1768 0.24 -0.1
1,849,189 + B158DRAFT_1768 0.24 +0.0
1,849,197 + B158DRAFT_1768 0.24 -0.7
1,849,197 + B158DRAFT_1768 0.24 -0.0
1,849,205 - B158DRAFT_1768 0.25 -0.3
1,849,205 - B158DRAFT_1768 0.25 -0.8
1,849,256 - B158DRAFT_1768 0.27 -0.3
1,849,383 - B158DRAFT_1768 0.32 -0.2
1,849,410 + B158DRAFT_1768 0.33 -0.3
1,849,410 + B158DRAFT_1768 0.33 -0.0
1,849,410 + B158DRAFT_1768 0.33 -0.6
1,849,410 + B158DRAFT_1768 0.33 +0.4
1,849,418 - B158DRAFT_1768 0.33 +0.1
1,849,418 - B158DRAFT_1768 0.33 -1.0
1,849,418 - B158DRAFT_1768 0.33 -0.2
1,849,418 - B158DRAFT_1768 0.33 -0.5
1,849,418 - B158DRAFT_1768 0.33 -0.2
1,849,474 + B158DRAFT_1768 0.35 -0.4

Or see this region's nucleotide sequence